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* Shorten all DESCRIPTION to <80 charsJustin Lecher2017-02-0539-39/+39
* sci-biology/vt: depend on either of the latex packagesMartin Mokrejš2017-01-311-1/+1
* sci-biology/repeatmasker: add trailing '/' after vendor_perl pathMartin Mokrejš2017-01-311-1/+1
* sci-biology/repeatmasker: remove escaping backslashes so that the ebuild work...Martin Mokrejš2017-01-311-8/+8
* sci-biology/trf-bin: trf binary needs glibc-2.14Martin Mokrejš2017-01-311-0/+1
* sci-biology/trf-bin: reintroduce a symlink from /opt/bin/$MY_PNMartin Mokrejš2017-01-311-0/+1
* sci-biology/repeatmasker: fix hardcoded paths to respect EPREFIXMartin Mokrejš2017-01-311-1/+6
* sci-biology/repeatmasker: more EPREFIX fixesMartin Mokrejš2017-01-311-2/+2
* sci-biology/repeatmasker: respect EPREFIXMartin Mokrejš2017-01-311-8/+8
* sci-biology/repeatmasker: add missing call to default in src_prepare()Martin Mokrejš2017-01-311-0/+1
* sci-biology/repeatmasker: depend on the now renamed packageMartin Mokrejš2017-01-311-1/+2
* sci-biology/trf-bin: renamed to reflect it is an upstream's binaryMartin Mokrejš2017-01-316-0/+641
* sci-biology/GAL: added additional depsMartin Mokrejš2017-01-311-1/+3
* sci-biology/GAL: depend on virtualsMartin Mokrejš2017-01-311-2/+2
* sci-biology/GAL: add more dependenciesMartin Mokrejš2017-01-311-2/+4
* sci-biology/apollo: QA fixesJustin Lecher2017-01-291-14/+5
* sci-biology/abacas: QA fixesJustin Lecher2017-01-291-5/+9
* sci-biology/VelvetOptimiser: QA fixesJustin Lecher2017-01-292-6/+5
* sci-biology/Ray: QA fixesJustin Lecher2017-01-291-11/+6
* sci-biology/MagicViewer: QA fixesJustin Lecher2017-01-292-5/+5
* sci-biology/HTSeq: QA fixesJustin Lecher2017-01-291-4/+5
* sci-biology/Gambit: QA fixesJustin Lecher2017-01-292-7/+8
* sci-biology/FLASH: QA fixesJustin Lecher2017-01-291-6/+3
* sci-biology/BG7: QA fixesJustin Lecher2017-01-291-4/+4
* sci-biology/karect: improve DESCRIPTION lineMartin Mokrejš2017-01-291-2/+2
* sci-biology/quast: updating to a current version, still incompleteMartin Mokrejš2017-01-292-5/+11
* sci-biology/SPAdes: install more HTML documentationMartin Mokrejš2017-01-292-2/+8
* sci-biology/SPAdes: version bump, remove old, src_install actually does also ...Martin Mokrejš2017-01-293-15/+19
* sci-biology/pb-honey: QA fixesJustin Lecher2017-01-291-3/+3
* sci-biology/metaseq: QA fixesJustin Lecher2017-01-291-3/+3
* sci-biology/flexbar: QA fixesJustin Lecher2017-01-291-4/+5
* sci-biology/breakdancer: QA fixesJustin Lecher2017-01-292-20/+10
* sci-biology/artemis-bin: Add missing slot operatorJustin Lecher2017-01-292-4/+6
* sci-biology/artemis: Add missing slot operatorJustin Lecher2017-01-292-4/+5
* sci-biology/SEECER: QA fixesJustin Lecher2017-01-292-13/+12
* sci-biology/Atlas2: Add missing slot operatorJustin Lecher2017-01-291-2/+2
* sci-biology/bamtools: Drop unused digestJustin Lecher2017-01-292-3/+2
* sci-biology/repeatmasker: QA fixesJustin Lecher2017-01-291-8/+9
* sci-biology/dipy: QA fixesJustin Lecher2017-01-292-18/+17
* sci-biology/BBmap: version bumpMartin Mokrejš2017-01-285-3/+47
* sci-biology/picard-9999: reintroduce src_prepare(), drop ant dependenciesMartin Mokrejš2017-01-241-3/+6
* sci-biology/picard-9999: do not apply the 2.2.2-build.xml.patchMartin Mokrejš2017-01-241-5/+0
* Revert "sci-biology/picard-9999: apply the 2.2.2 patch to drop bundled htsjdk"Martin Mokrejš2017-01-241-1/+1
* sci-biology/picard-9999: apply the 2.2.2 patch to drop bundled htsjdkMartin Mokrejš2017-01-241-1/+1
* sci-biology/picard: still not working ebuild for current gradle-based build s...Martin Mokrejš2017-01-211-2/+2
* sci-biology/picard: adjust to test directory now moved elsewhere in src streeMartin Mokrejš2017-01-201-1/+1
* sci-biology/eval: drop EPYTHON variable which was empty and let fix_shebangs ...Martin Mokrejš2017-01-171-1/+1
* Merge remote-tracking branch 'github/master'Justin Lecher2017-01-121-1/+1
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| * use my name instead of online monikerHorea Christian2017-01-091-1/+1
* | sci-biology/picard-2.8.1: version bump, do not compile tests by defaultMartin Mokrejš2017-01-122-1/+61