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authorMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2017-01-24 19:48:16 +0100
committerMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2017-01-24 19:48:16 +0100
commit530a6b57a5e0398a0d9b90925dae62d9a7c00302 (patch)
treeb116bb0260966e71da3a57c4c1fe5366ef79b9de /sci-biology
parentRevert "sci-biology/picard-9999: apply the 2.2.2 patch to drop bundled htsjdk" (diff)
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sci-biology/picard-9999: do not apply the 2.2.2-build.xml.patch
Current git checkouts contain a fake build.xml which instructs users to use gradle instead of ant. Package-Manager: Portage-2.3.3, Repoman-2.3.1
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/picard/picard-9999.ebuild5
1 files changed, 0 insertions, 5 deletions
diff --git a/sci-biology/picard/picard-9999.ebuild b/sci-biology/picard/picard-9999.ebuild
index e3f22b9b7..2bc65f1b4 100644
--- a/sci-biology/picard/picard-9999.ebuild
+++ b/sci-biology/picard/picard-9999.ebuild
@@ -36,11 +36,6 @@ EANT_NEEDS_TOOLS="true"
JAVA_ANT_REWRITE_CLASSPATH="true"
EANT_GENTOO_CLASSPATH="snappy-1.1,cofoja,commons-jexl-2,ant-core,htsjdk"
-java_prepare() {
- default
- epatch "${FILESDIR}"/${PV}-build.xml.patch
-}
-
src_compile(){
# work around gradle writing $HOME/.gradle, requiring $HOME/.git and $HOME/.m2/
# https://github.com/samtools/htsjdk/issues/660#issuecomment-232155965