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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-01-24 20:04:13 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-01-24 20:04:13 +0100 |
| commit | 2361c03b44c7290b229cae0bf23b8ec1b7742c18 (patch) | |
| tree | 6f971dab924ea2b70e4c7c78fff729d63462ec0c /sci-biology | |
| parent | sci-biology/picard-9999: do not apply the 2.2.2-build.xml.patch (diff) | |
| download | sci-2361c03b44c7290b229cae0bf23b8ec1b7742c18.tar.gz sci-2361c03b44c7290b229cae0bf23b8ec1b7742c18.tar.bz2 sci-2361c03b44c7290b229cae0bf23b8ec1b7742c18.zip | |
sci-biology/picard-9999: reintroduce src_prepare(), drop ant dependencies
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/picard/picard-9999.ebuild | 9 |
1 files changed, 6 insertions, 3 deletions
diff --git a/sci-biology/picard/picard-9999.ebuild b/sci-biology/picard/picard-9999.ebuild index 2bc65f1b4..050e03e47 100644 --- a/sci-biology/picard/picard-9999.ebuild +++ b/sci-biology/picard/picard-9999.ebuild @@ -7,7 +7,7 @@ EAPI="6" #JAVA_PKG_IUSE="doc source" JAVA_PKG_IUSE="" -inherit git-r3 java-pkg-2 java-ant-2 +inherit git-r3 java-pkg-2 DESCRIPTION="Java-based command-line utilities that manipulate SAM/BAM/CRAM/VCF files" HOMEPAGE="http://picard.sourceforge.net @@ -22,7 +22,6 @@ KEYWORDS="" CDEPEND="dev-java/snappy:1.1 dev-java/cofoja:0 dev-java/commons-jexl:2 - dev-java/ant-core:0 dev-java/htsjdk:0" DEPEND=">=virtual/jdk-1.8 @@ -34,7 +33,11 @@ RDEPEND=">=virtual/jre-1.8 EANT_BUILD_TARGET="all" EANT_NEEDS_TOOLS="true" JAVA_ANT_REWRITE_CLASSPATH="true" -EANT_GENTOO_CLASSPATH="snappy-1.1,cofoja,commons-jexl-2,ant-core,htsjdk" +EANT_GENTOO_CLASSPATH="snappy-1.1,cofoja,commons-jexl-2,htsjdk" + +src_prepare() { + default +} src_compile(){ # work around gradle writing $HOME/.gradle, requiring $HOME/.git and $HOME/.m2/ |