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Diffstat (limited to 'sci-biology/biojava/biojava-1.6.ebuild')
-rw-r--r-- | sci-biology/biojava/biojava-1.6.ebuild | 73 |
1 files changed, 0 insertions, 73 deletions
diff --git a/sci-biology/biojava/biojava-1.6.ebuild b/sci-biology/biojava/biojava-1.6.ebuild deleted file mode 100644 index edfadace1dcc..000000000000 --- a/sci-biology/biojava/biojava-1.6.ebuild +++ /dev/null @@ -1,73 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -# TODO: -# -Fix javadoc generation OutOfMemoryError -# -Add launchers for 2 apps in biojava-apps.jar -# -Decide on demo packaging. (Whether to install its jar as done or sources by examples USE flag) - -EAPI=2 - -#JAVA_PKG_IUSE="doc source test" -JAVA_PKG_IUSE="source test" - -inherit eutils java-pkg-2 java-ant-2 - -DESCRIPTION="A Java framework for processing biological data" -HOMEPAGE="http://biojava.org" -SRC_URI="http://www.biojava.org/download/bj16/all/${P}-all.jar" -LICENSE="LGPL-2.1" -SLOT="0" -KEYWORDS="~amd64" -IUSE="" - -COMMON_DEPEND="dev-java/jgrapht:0 - dev-java/commons-cli:1 - dev-java/commons-dbcp:0 - dev-java/commons-pool:0 - dev-java/bytecode:0" - -RDEPEND=">=virtual/jre-1.5 - ${COMMON_DEPEND}" -DEPEND=">=virtual/jdk-1.5 - app-arch/unzip - ${COMMON_DEPEND} - test? - ( - dev-java/junit:4 - dev-java/ant-junit4 - )" - -S="${WORKDIR}/biojava-live_${PV}" - -JAVA_ANT_IGNORE_SYSTEM_CLASSES="true" - -src_prepare() { - einfo "Removing budled jars." - find . -name "*.jar" -print -delete - rm -r doc/* - java-pkg_jar-from jgrapht jgrapht.jar jgrapht-jdk1.5.jar - java-pkg_jar-from commons-cli-1 - java-pkg_jar-from commons-dbcp commons-dbcp.jar commons-dbcp-1.1.jar - java-pkg_jar-from commons-pool commons-pool.jar commons-pool-1.1.jar - java-pkg_jar-from bytecode -} - -src_compile() { - #ANT_OPTS="${ANT_OPTS} -Xmx512m" - eant package-biojava package-biojava package-demos package-apps #$(use_doc javadocs-all) -} - -src_install() { - java-pkg_newjar ant-build/biojava.jar ${PN}.jar - java-pkg_newjar ant-build/apps.jar ${PN}-apps.jar - java-pkg_newjar ant-build/demos.jar ${PN}-demos.jar - #use doc && java-pkg_dojavadoc ant-build/doc/{biojava,apps,demos} - use source && java-pkg_dosrc {src,apps,demos}/org -} - -src_test() { - java-pkg_jar-from junit-4 junit.jar junit-4.4.jar - ANT_TASKS="ant-junit4" eant runtests -} |