diff options
| author |   Pacho Ramos <pacho@gentoo.org> | 2023-07-21 10:00:36 +0200 |
|---|---|---|
| committer | Pacho Ramos <pacho@gentoo.org> | 2023-07-21 10:01:18 +0200 |
| commit | ddf8fcf2b6c6e590991202b108173b2e9792fe3d (patch) | |
| tree | a7196203de75fc5436e6d222d2a366a9a590a499 /sci-chemistry | |
| parent | net-mail/pfqueue: Fix incompatible pointer to integer conversion (diff) | |
| download | gentoo-ddf8fcf2b6c6e590991202b108173b2e9792fe3d.tar.gz gentoo-ddf8fcf2b6c6e590991202b108173b2e9792fe3d.tar.bz2 gentoo-ddf8fcf2b6c6e590991202b108173b2e9792fe3d.zip | |
sci-chemistry/dssp: add 4.4.1
Closes: https://bugs.gentoo.org/910585
Signed-off-by: Pacho Ramos <pacho@gentoo.org>
Diffstat (limited to 'sci-chemistry')
| -rw-r--r-- | sci-chemistry/dssp/Manifest | 1 | ||||
| -rw-r--r-- | sci-chemistry/dssp/dssp-4.4.1.ebuild | 54 |
2 files changed, 55 insertions, 0 deletions
diff --git a/sci-chemistry/dssp/Manifest b/sci-chemistry/dssp/Manifest index d8219dde5151..f4b46c4fa494 100644 --- a/sci-chemistry/dssp/Manifest +++ b/sci-chemistry/dssp/Manifest @@ -2,3 +2,4 @@ DIST dssp-2.2.1.tgz 47141 BLAKE2B 34d8b2db8797a8c23763766c0214337f03584c4be52c1b DIST dssp-3.0.11.tar.gz 168085 BLAKE2B e1c42fd22cfb2287f10b5deae48b56a4583d4a67737a3485dcbd160d1597a15c2d5105c3794c875d8001abede1c014efb4f7f5b7c250f867bdf9ed95a0860217 SHA512 a0cfe44e517ff1f909ef2928b62ae2c639c6bddfd8a0fb538883f647fd2771e00da68e0fd2521aa02ba3c6d1b0c9b784b7fe142392af3a3abf6ea89f1546bd9d DIST dssp-4.3.1.tar.gz 226842 BLAKE2B 86318f05b8381d94fa9c65a956f5fb607ef8072b0395d912e20697ba36836c449ddff31a4a64d0005bbfe34899f71853c0f15a911042389fc894934c08fc34c8 SHA512 4dc1a3f5c7ba258ebf548674c7b33c36b0e3a7d14911394eb8d2955c235f3cb1d6c50cb03f411db55a8a9d7aa93e4d03354c47f9f0126b0bdcbf40dc9391d403 DIST dssp-4.4.0.tar.gz 161773 BLAKE2B 87673be73f3163ba6fa090cc7acd4f864d41922033da9d126535b84e2da4defaaa8781a8cda6e80103dc75359718cd867b9baf90c74ae3ff923e212b520998a2 SHA512 1b09306c05587c278fcd881e0d3c169d44d960d8578f310adbd79b054683c257d0ee00d6bdfb5b0d7cd81c224f3572c2c7538a42d964817d587632128b96daa9 +DIST dssp-4.4.1.tar.gz 161797 BLAKE2B d6bfb40a730f39e9d5a0988ce22a9dd377ec08a09e29f77e5afaac26d512cf87f6e289c1e4e3e63cfef7354b10fb57bf410bcc169604b1b6a6078380e4f08d26 SHA512 1bcf9e16efc5d3a7de11e24ed63e47d3263123af4670b8f3daa97cdf7cc33202fb4d564acac3024ed4edcce1ef8278f71f5312f27a234d2957afa6f563c88ed6 diff --git a/sci-chemistry/dssp/dssp-4.4.1.ebuild b/sci-chemistry/dssp/dssp-4.4.1.ebuild new file mode 100644 index 000000000000..d79883c4e211 --- /dev/null +++ b/sci-chemistry/dssp/dssp-4.4.1.ebuild @@ -0,0 +1,54 @@ +# Copyright 1999-2023 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 +inherit cmake + +DESCRIPTION="The protein secondary structure standard" +HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/ https://github.com/PDB-REDO/dssp" +SRC_URI="https://github.com/PDB-REDO/${PN}/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="BSD-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +# doc disabled as it only generates a PDF from the manpage for now +# https://github.com/PDB-REDO/dssp/issues/64 +#IUSE="doc" + +CDEPEND=" + dev-libs/boost:=[zlib] + >=dev-libs/libmcfp-1.2.2 + >=sci-libs/libcifpp-5.1.0 +" +BDEPEND="${CDEPEND}" +# doc? ( +# || ( app-text/pandoc-bin[pandoc-symlink] app-text/pandoc ) +# dev-python/weasyprint +# ) +DEPEND="" +RDEPEND="${CDEPEND}" + +#src_prepare() { +# # wkhtmltopdf is not available on Gentoo +# sed -i -e \ +# 's/-t html/-t html --pdf-engine=weasyprint/' \ +# CMakeLists.txt +# cmake_src_prepare +#} + +src_configure() { + local mycmakeargs=( + #-DGENERATE_DOCUMENTATION=$(usex doc) + -DGENERATE_DOCUMENTATION=NO + ) + cmake_src_configure +} + +pkg_postinst() { + if has_version "<=sci-chemistry/gromacs-2022"; then + ewarn "DSSP > 3.0.x is not compatible with gmx do_dssp:" + ewarn "https://gitlab.com/gromacs/gromacs/-/issues/4129" + ewarn + ewarn "Feel free to mask newer versions if needed." + fi +} |