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authorSam James <sam@gentoo.org>2024-05-08 11:44:56 +0100
committerSam James <sam@gentoo.org>2024-05-08 11:45:15 +0100
commitdb6cf7a1354743f4de574963a6d3cb409138896c (patch)
treee3643a9ca09b82ff809467f8ebba97d07b44a620 /sci-biology
parentsci-biology/velvet: scrub patch, add bug ref (diff)
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sci-biology/velvet: fixup whitespace & openmp check
Signed-off-by: Sam James <sam@gentoo.org>
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/velvet/velvet-1.2.10.ebuild27
1 files changed, 18 insertions, 9 deletions
diff --git a/sci-biology/velvet/velvet-1.2.10.ebuild b/sci-biology/velvet/velvet-1.2.10.ebuild
index bb1a0b441b1e..07b44eb65254 100644
--- a/sci-biology/velvet/velvet-1.2.10.ebuild
+++ b/sci-biology/velvet/velvet-1.2.10.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
@@ -16,17 +16,26 @@ SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE="doc openmp"
-BDEPEND="doc? ( virtual/latex-base )
- openmp? (
- || (
- sys-devel/gcc[openmp]
- sys-devel/clang-runtime[openmp]
- )
- )
+BDEPEND="
+ doc? ( virtual/latex-base )
+ openmp? (
+ || (
+ sys-devel/gcc[openmp]
+ sys-devel/clang-runtime[openmp]
+ )
+ )
"
PATCHES=( "${FILESDIR}/${P}-incompatible-pointers.patch" )
+pkg_pretend() {
+ [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
+}
+
+pkg_setup() {
+ [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
+}
+
src_prepare() {
default
if ! use doc; then
@@ -58,7 +67,7 @@ src_prepare() {
CFLAGS="${CFLAGS}"
OPT="${CFLAGS}"
)
- use openmp && MAKE_XOPTS+=( OPENMP=1 ) && tc-check-openmp
+ use openmp && MAKE_XOPTS+=( OPENMP=1 )
[[ ! -z "${VELVET_MAXKMERLENGTH}" ]] && MAKE_XOPTS+=( MAXKMERLENGTH=${VELVET_MAXKMERLENGTH} )
[[ ! -z "${VELVET_CATEGORIES}" ]] && MAKE_XOPTS+=( CATEGORIES=${VELVET_CATEGORIES} )
[[ ! -z "${VELVET_BIGASSEMBLY}" ]] && MAKE_XOPTS+=( BIGASSEMBLY=${VELVET_BIGASSEMBLY} )