diff options
Diffstat (limited to 'sci-libs')
| -rw-r--r-- | sci-libs/clipper/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-libs/clipper/Manifest | 21 | ||||
| -rw-r--r-- | sci-libs/clipper/clipper-20100511-r1.ebuild | 56 | ||||
| -rw-r--r-- | sci-libs/clipper/files/20100511-makefile.patch | 23 | ||||
| -rw-r--r-- | sci-libs/clipper/files/clipper-20100511-outofsourcebuild.patch | 16 |
5 files changed, 20 insertions, 103 deletions
diff --git a/sci-libs/clipper/ChangeLog b/sci-libs/clipper/ChangeLog index 66383ab5c22b..cbb651a523e0 100644 --- a/sci-libs/clipper/ChangeLog +++ b/sci-libs/clipper/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-libs/clipper # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-libs/clipper/ChangeLog,v 1.22 2013/05/28 18:15:50 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-libs/clipper/ChangeLog,v 1.23 2013/07/10 11:29:49 jlec Exp $ + + 10 Jul 2013; Justin Lecher <jlec@gentoo.org> -clipper-20100511-r1.ebuild, + -files/20100511-makefile.patch, + -files/clipper-20100511-outofsourcebuild.patch: + Drop old versioned named ebuild *clipper-2.1_p100511-r1 (28 May 2013) diff --git a/sci-libs/clipper/Manifest b/sci-libs/clipper/Manifest index e47324f1fe0f..2a9e38cb837e 100644 --- a/sci-libs/clipper/Manifest +++ b/sci-libs/clipper/Manifest @@ -3,18 +3,25 @@ Hash: SHA512 AUX 2.1_p100511-makefile.patch 676 SHA256 11b270b3c58190a749bea9899aea3e45d0649ae49acf2b4089b77f6a39ddbfba SHA512 b30210950880555ae60c8e907376a464483bc4699b14a14c66cf78a535e0698758dc55b14c1758b24b4168129e9ed0c7d84b4f3a44e5ff328ae94d0ff900f31b WHIRLPOOL 82260685f40193c0f0ad995d5f1dcce1811bb278f8fe0cd9e5d7cb2262e3445ff23e6512469ff30b86cb97a767add06146fea8c3b5239b864546599e52d3acc6 AUX 20091215-missing-var.patch 663 SHA256 abb3e83e3bcdfa1ba4ce8d382a8f490e70c2c761d574484a38741bba438a00d4 SHA512 17b021558572dafd79379b22fe916c5f92c424a002fc5118338e862fdba5dbd83cdf8a91c8495a10924284491cfa451da13ab2a78fe6902fc6dd904b5b4a0a99 WHIRLPOOL 0b60772b52208437e35c9d1720e50615db120b17bad2866e7ce4ec4a8c02219063f88fb180dfadd08dbc91ae34d09f8277ab552457de14bcc573bf0b22fa34e1 -AUX 20100511-makefile.patch 676 SHA256 11b270b3c58190a749bea9899aea3e45d0649ae49acf2b4089b77f6a39ddbfba SHA512 b30210950880555ae60c8e907376a464483bc4699b14a14c66cf78a535e0698758dc55b14c1758b24b4168129e9ed0c7d84b4f3a44e5ff328ae94d0ff900f31b WHIRLPOOL 82260685f40193c0f0ad995d5f1dcce1811bb278f8fe0cd9e5d7cb2262e3445ff23e6512469ff30b86cb97a767add06146fea8c3b5239b864546599e52d3acc6 AUX clipper-2.1_p100511-outofsourcebuild.patch 594 SHA256 c4802346073aac3a1e9e3777c3ee28d08bcfe823178e4bafb40d2dc7732e4a0a SHA512 63b06be35ced8d7151d43886c2ca58d07d9bd585dff541198440304e476780faa485f483445880dbac6ca133a63c762b7dde7997267e846ab5d0ed0c1e4c65a7 WHIRLPOOL 871939ff8f1727e8f0de0485ac1fcf487a6708c731559d747c3d28783dcaaf2622696508f5b0d679eb90528826356c49eca79abc4860781c00859f31529b7c22 -AUX clipper-20100511-outofsourcebuild.patch 594 SHA256 c4802346073aac3a1e9e3777c3ee28d08bcfe823178e4bafb40d2dc7732e4a0a SHA512 63b06be35ced8d7151d43886c2ca58d07d9bd585dff541198440304e476780faa485f483445880dbac6ca133a63c762b7dde7997267e846ab5d0ed0c1e4c65a7 WHIRLPOOL 871939ff8f1727e8f0de0485ac1fcf487a6708c731559d747c3d28783dcaaf2622696508f5b0d679eb90528826356c49eca79abc4860781c00859f31529b7c22 DIST clipper-2.1-100511-ac.tar.gz 993754 SHA256 00d470af423c015022934d5a12fde36c86d5729227f41e1139d7c6513368b7aa SHA512 a4e7d49e55a49813cf640c9384a5630352a5bbda773334681aff87a2a8f70d2eaedda5715b3546231747b49d76c58c2a3afe6010cf156c63d62b1b9500c0c802 WHIRLPOOL e0a8377702c573d39f4f62d8f5e214676f6c323f24d39c1bfdca81b574cf26f12f7444f21c92b53fad38e8cedb14a9befaf65131b5b6055ace28d8b217ed564c EBUILD clipper-2.1_p100511-r1.ebuild 1368 SHA256 c661f2f9af239a29cef8454273b9203fd6a64e4b24cfde2572e1eec912e201ac SHA512 a9fa2950a13acfbc9423580fb16826833855323d0ec5b6b9ba947036b7c13a7e9a3fa4a9c4b8580b0047491df62e55ff7134d262b7e82482ae72399927d02479 WHIRLPOOL 72f12a6a8e2ff6d0c1f09798f9447ca75c9799fd452e4e6a7f9254ac2f539050c580b14c9ea4b27d9b5f9f5bf155ba073de76d19bf57394bd4e301fabac609af -EBUILD clipper-20100511-r1.ebuild 1383 SHA256 b01a7d77b712179d82d3ba4e90306c7afe61d38111cba237e6e3f95c0e764c49 SHA512 54905cf4672d4cae40aed61d8a65220be54b16bd0756c39e3295010a07f538d0e868d97db9b3c99af6b552b0bb866d2e49ecc630d829ff809a5532a11abb2549 WHIRLPOOL 4d25dd086d33dfe034afbf9ea224b5a7af21fd6fe9f9ec0391d02f7f2ed355abea991ebb63f7bf7e86ab31ba1408dbf319d2cefede939dc3161aea7481f7bece -MISC ChangeLog 3445 SHA256 8dfe673ee5b16301003f15ec0e6bfd1bcb04553a78ac7f2d524faf3d6d39526f SHA512 10c3ff549c756248e04aa6391d2f46f50728eccdff9cc7b61f8dfaeb4cf1548de8c9a1bd14514abeb5316a0b2d281d6fc1e1cba76d8eafd5cb895b406f971239 WHIRLPOOL f8825224a314fa5935e717b57ff6250cb7a65bdac3a6aab79b5a64aef6a058cc9d1139f562385cd7c7c6dcd9e875ac0be91b420b951eed6b150a86a99e004b1c +MISC ChangeLog 3640 SHA256 5fa1dae443cc0cfcdcfb2285900938df07271c9031a4a0750a4cadd0c001dfa9 SHA512 6efca10a8e9382d8a9e42497b8963a5f1ee80d217ebc90702d1bd56dda62e14e42113637b0ff1695b27c96ff8a0b66b2d1bd5a6a8f928ae4e8ad7a12df883099 WHIRLPOOL 55ff3096df3eed268cd3c2c57f96a402a44297a312d2d980583fd15ebcf5e6836d8646b0ce36b64dfea8ab3728def977c259d15544e3051b8f7f6136b07adc39 MISC metadata.xml 168 SHA256 705462092174cd3e2e3ec1557a28108a746b7351f803d8ca6d1b925b3111c3ff SHA512 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4-digit year to 2 digits -SRC_URI="http://www.ysbl.york.ac.uk/~cowtan/clipper/clipper-2.1-${PV:2:${#PV}}-ac.tar.gz" - -LICENSE="LGPL-2.1" -SLOT="0" -KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux" -IUSE="debug static-libs" - -RDEPEND=" - sci-libs/ccp4-libs - sci-libs/fftw - sci-libs/mmdb" -DEPEND="${RDEPEND}" - -S="${WORKDIR}"/${PN}-2.1 - -PATCHES=( - "${FILESDIR}"/20091215-missing-var.patch - "${FILESDIR}"/${PV}-makefile.patch - "${FILESDIR}"/${P}-outofsourcebuild.patch - ) - -src_configure() { - # Recommended on ccp4bb/coot ML to fix crashes when calculating maps - # on 64-bit systems - append-flags -fno-strict-aliasing - - local myeconfargs=( - --enable-ccp4 - --enable-cif - --enable-cns - --enable-contrib - --enable-minimol - --enable-mmdb - --enable-phs - --with-mmdb="${EPREFIX}/usr" - $(use_enable debug) - ) - autotools-utils_src_configure -} - -src_test() { - emake -C "${AUTOTOOLS_BUILD_DIR}"/examples check -} diff --git a/sci-libs/clipper/files/20100511-makefile.patch b/sci-libs/clipper/files/20100511-makefile.patch deleted file mode 100644 index d933e88f7c7e..000000000000 --- a/sci-libs/clipper/files/20100511-makefile.patch +++ /dev/null @@ -1,23 +0,0 @@ - Makefile.am | 6 +++--- - 1 files changed, 3 insertions(+), 3 deletions(-) - -diff --git a/Makefile.am b/Makefile.am -index 745824d..0da0ddd 100644 ---- a/Makefile.am -+++ b/Makefile.am -@@ -1,12 +1,12 @@ - # -*- mode: Makefile; mode: font-lock -*- - AUTOMAKE_OPTIONS = foreign --SUBDIRS = config clipper examples dox --DIST_SUBDIRS = config clipper examples dox -+SUBDIRS = config clipper dox -+DIST_SUBDIRS = config clipper dox - EXTRA_DIST = AUTHORS COPYING ChangeLog INSTALL NEWS README - bin_SCRIPTS = clipper-config - # pkgconfigdir = $(libdir)/pkgconfig - # pkgconfig_DATA = clipper.pc - if DEBUG --AM_CXXFLAGS = -g -DDEBUG -+AM_CXXFLAGS = -DDEBUG - endif - ACLOCAL_AMFLAGS = -I config diff --git a/sci-libs/clipper/files/clipper-20100511-outofsourcebuild.patch b/sci-libs/clipper/files/clipper-20100511-outofsourcebuild.patch deleted file mode 100644 index 2db566b7b799..000000000000 --- a/sci-libs/clipper/files/clipper-20100511-outofsourcebuild.patch +++ /dev/null @@ -1,16 +0,0 @@ - examples/Makefile.am | 2 +- - 1 files changed, 1 insertions(+), 1 deletions(-) - -diff --git a/examples/Makefile.am b/examples/Makefile.am -index 203ce96..2b65f1c 100644 ---- a/examples/Makefile.am -+++ b/examples/Makefile.am -@@ -27,7 +27,7 @@ maketestdata_SOURCES = maketestdata.cpp - - TESTS = maketestdata - --INCLUDES = -I.. $(FFTW_CXXFLAGS) $(MMDB_CXXFLAGS) $(CCP4_CXXFLAGS) $(CCTBX_CXXFLAGS) $(BOOST_CXXFLAGS) -+INCLUDES = -I$(top_srcdir) $(FFTW_CXXFLAGS) $(MMDB_CXXFLAGS) $(CCP4_CXXFLAGS) $(CCTBX_CXXFLAGS) $(BOOST_CXXFLAGS) - - LIBS = $(FFTW_LIBS) $(CCP4_LIBS) $(MMDB_LIBS) $(CCTBX_LIBS) - |