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diff --git a/sci-biology/vienna-rna/vienna-rna-1.4.ebuild b/sci-biology/vienna-rna/vienna-rna-1.4.ebuild
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+# Copyright 1999-2004 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.4.ebuild,v 1.1 2004/12/23 16:09:31 ribosome Exp $
+
+inherit flag-o-matic
+
+DESCRIPTION="Vienna RNA Package - RNA secondary structure prediction and comparison"
+HOMEPAGE="http://www.tbi.univie.ac.at/~ivo/RNA/"
+SRC_URI="http://www.tbi.univie.ac.at/~ivo/RNA/ViennaRNA-${PV}.tar.gz"
+LICENSE="vienna-rna"
+
+SLOT=0
+KEYWORDS="x86 ~ppc"
+IUSE="no-utils no-readseq perl"
+
+DEPEND="perl? ( dev-lang/perl )
+	!no-utils? ( dev-lang/perl )"
+
+S="${WORKDIR}/ViennaRNA-${PV}"
+
+src_compile() {
+	sed -ie 's:/usr/local/bin/perl:/usr/bin/perl:' Perl/RNAfold.pl
+	sed -ie 's:/usr/local/bin/perl:/usr/bin/perl:' Utils/ct2b.pl
+	sed -ie 's:/usr/local/bin/perl:/usr/bin/perl:' Utils/b2mt.pl
+	sed -ie 's:/usr/local/bin/perl:/usr/bin/perl:' Utils/dpzoom.pl
+	sed -ie 's:/usr/local/bin/perl:/usr/bin/perl:' Utils/mountain.pl
+	append-flags -I../H
+	make -e library programs gammel subopt || die
+	use perl && make -e perl || die
+	use no-utils || make -e util || die
+	use no-readseq || cd Readseq && make -e || die
+}
+
+src_install() {
+	insinto /usr/include/vienna-rna
+	doins H/*
+	dolib.a lib/libRNA.a
+	dobin Cluster/{AnalyseDists,AnalyseSeqs}
+	dobin Progs/RNA{distance,eval,fold,heat,inverse,pdist}
+	dobin Subopt/{RNAsubopt,popt}
+
+	dodoc CHANGES CREDITS README
+	doinfo man/RNAlib.info
+	newman man/AnalyseDists.man AnalyseDists.man.1
+	newman man/AnalyseSeqs.man AnalyseSeqs.man.1
+	newman man/RNAdistance.man RNAdistance.man.1
+	newman man/RNAeval.man RNAeval.man.1
+	newman man/RNAfold.man RNAfold.man.1
+	newman man/RNAheat.man RNAheat.man.1
+	newman man/RNAinverse.man RNAinverse.man.1
+	newman man/RNApdist.man RNApdist.man.1
+	newman Subopt/RNAsubopt.man RNAsubopt.man.1
+	dohtml man/RNAlib.html
+	insinto /usr/share/doc/${P}/pdf
+	doins man/RNAlib.pdf
+
+	if use perl; then
+		cd Perl
+		make install DESTDIR=${D} || die
+		dodoc RNA_wrap.doc
+		cd ${S}
+	fi
+
+	if ! use no-utils; then
+		dobin Utils/{b2ct,ct2b.pl,dpzoom.pl,mountain.pl,b2mt.pl,Fold,RNAplot}
+		newdoc Utils/README README.utils
+		newman Utils/RNAplot.man RNAplot.man.1
+	fi
+
+	if ! use no-readseq; then
+		newbin Readseq/readseq readseq-vienna
+		newdoc Readseq/Readme README.readseq
+		newdoc Readseq/Formats FORMATS.readseq
+		newdoc Readseq/README README.readseq-vienna
+	fi
+}