Removing sci-libs/rcsb-data; broken since ages #296755

5 files changed, 0 insertions, 131 deletions

diff --git a/sci-libs/rcsb-data/ChangeLog b/sci-libs/rcsb-data/ChangeLog
deleted file mode 100644
index b351abf2a532..000000000000
--- a/sci-libs/rcsb-data/ChangeLog
+++ /dev/null
@@ -1,40 +0,0 @@
-# ChangeLog for sci-libs/rcsb-data
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/rcsb-data/ChangeLog,v 1.9 2009/12/13 17:37:24 flameeyes Exp $
-
-  13 Dec 2009; Diego E. Pettenò <flameeyes@gentoo.org>
-  rcsb-data-1.700.ebuild:
-  Add die clauses to install since emake does not die on failure.
-
-  08 Apr 2008; Donnie Berkholz <dberkholz@gentoo.org>;
-  rcsb-data-1.700.ebuild:
-  Keyword ~amd64, fix quoting.
-
-  15 Mar 2007; Danny van Dyk <kugelfang@gentoo.org> rcsb-data-1.700.ebuild:
-  QA: Removed illegal use of ${ROOT}. Bug #168043
-
-  26 Sep 2006; Donnie Berkholz <dberkholz@gentoo.org>;
-  rcsb-data-1.700.ebuild:
-  Stable on x86/ppc.
-
-  26 Sep 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
-  Change herd to sci-chemistry from sci.
-
-  05 Aug 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
-  Remove myself as maintainer, anyone feel free to work on this, although I'll
-  continue to do so as well.
-
-  07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
-  Update to my new email address.
-
-  26 Apr 2006; Donnie Berkholz <dberkholz@gentoo.org>;
-  rcsb-data-1.700.ebuild:
-  Keyword ~ppc.
-
-*rcsb-data-1.700 (20 Dec 2005)
-
-  20 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
-  +files/respect-bindir.patch, +metadata.xml, +rcsb-data-1.700.ebuild:
-  Part of the RCSB Protein Data Bank tools. Provides the data necessary to run
-  the other applications.
-
diff --git a/sci-libs/rcsb-data/Manifest b/sci-libs/rcsb-data/Manifest
deleted file mode 100644
index 039bbfe79815..000000000000
--- a/sci-libs/rcsb-data/Manifest
+++ /dev/null
@@ -1,15 +0,0 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
-AUX respect-bindir.patch 798 RMD160 99f8aad7a654d8c29bbf72b8fc79cfcf7d0afdc7 SHA1 62a6d90c9e9fe9907dcf03a9c2d166605ea0a795 SHA256 b375266abbf7fd0fe7de9f453b02e786c45a596da201d0139b325a3f2872437e
-DIST pdb-extract-v1.700-prod-src.tar.gz 9081548 RMD160 c565de9af1cea09ccf0bd59527191fc76a4b7aa1 SHA1 27eedd1d46e95e7006c90694e379bdcb4f20fd92 SHA256 b35d2bf5d7f96580782a3645ab288aec1be21926bf52969f4de74d4f514a471c
-EBUILD rcsb-data-1.700.ebuild 1055 RMD160 e89900898b259e9682adf31dbcc03d7cbf9e4c1e SHA1 ba313d7c92eb7d470494bd20408e3ef86420d506 SHA256 c145daa080531d6c439ce59a8bfb8d5d504cbb3e54c0ffd79956a7c71e5dcb7d
-MISC ChangeLog 1459 RMD160 5b4c6fe4b76245bcb7eb97d989e9edffe865887a SHA1 ed0620552fab0021792844cf5b9b5b6234ee5713 SHA256 e2a1250e574b04c06cd3eda06e1f859128f0e5f9f19f17ff959196d8a349256c
-MISC metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 SHA1 cb0b513473c0348f4f6f6cd9a132e4884155fddb SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852
------BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.13 (GNU/Linux)
-
-iEYEARECAAYFAkslJjoACgkQAiZjviIA2Xg5GACfXS82TmWkqm92wJp4AVjeKB2z
-oUkAn0OyLPtT1HJs/KszAewt5rICUD8j
-=jcra
------END PGP SIGNATURE-----
diff --git a/sci-libs/rcsb-data/files/respect-bindir.patch b/sci-libs/rcsb-data/files/respect-bindir.patch
deleted file mode 100644
index a7925c489591..000000000000
--- a/sci-libs/rcsb-data/files/respect-bindir.patch
+++ /dev/null
@@ -1,30 +0,0 @@
-diff -urN pdb-extract-v1.700-prod-src.orig/etc/binary.sh pdb-extract-v1.700-prod-src/etc/binary.sh
---- pdb-extract-v1.700-prod-src.orig/etc/binary.sh	2005-12-18 23:53:45.000000000 -0800
-+++ pdb-extract-v1.700-prod-src/etc/binary.sh	2005-12-18 23:55:49.000000000 -0800
-@@ -6,6 +6,8 @@
- #
- #  Assumptions: Script is started from within the etc directory.
- 
-+BINDIR="/usr/bin"
-+
- # Change mode of data directory recursively to allow full access.
- chmod -R 777 ../data
-  
-@@ -31,7 +33,7 @@
- 
- # Create component.odb
- 
--./bin/connect -all
-+${BINDIR}/connect -all
- 
- # Move the result to the binary directory
- mv component_new.odb data/binary/component.odb
-@@ -44,7 +46,7 @@
- 
- 
- # Start main binary production
--./bin/binary_main -dic -path .
-+${BINDIR}/binary_main -dic -path .
- 
- 
- # Cleanup all files
diff --git a/sci-libs/rcsb-data/metadata.xml b/sci-libs/rcsb-data/metadata.xml
deleted file mode 100644
index 9ac9ffdb3a41..000000000000
--- a/sci-libs/rcsb-data/metadata.xml
+++ /dev/null
@@ -1,5 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-<herd>sci-chemistry</herd>
-</pkgmetadata>
diff --git a/sci-libs/rcsb-data/rcsb-data-1.700.ebuild b/sci-libs/rcsb-data/rcsb-data-1.700.ebuild
deleted file mode 100644
index cc2fb105ab4d..000000000000
--- a/sci-libs/rcsb-data/rcsb-data-1.700.ebuild
+++ /dev/null
@@ -1,41 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/rcsb-data/rcsb-data-1.700.ebuild,v 1.6 2009/12/13 17:37:24 flameeyes Exp $
-
-inherit eutils
-
-MY_PN="pdb-extract"
-MY_P="${MY_PN}-v${PV}-prod-src"
-DESCRIPTION="Data required to run RCSB PDB applications"
-HOMEPAGE="http://sw-tools.pdb.org/apps/PDB_EXTRACT/index.html"
-SRC_URI="http://sw-tools.pdb.org/apps/PDB_EXTRACT/${MY_P}.tar.gz"
-LICENSE="PDB"
-SLOT="0"
-KEYWORDS="~amd64 ppc x86"
-IUSE=""
-RDEPEND=""
-DEPEND="${RDEPEND}
-	sci-chemistry/pdb-extract"
-S="${WORKDIR}/${MY_P}"
-
-src_unpack() {
-	unpack ${A}
-	epatch "${FILESDIR}"/respect-bindir.patch
-	sed -i \
-		-e "s:^\(BINDIR=\).*:\1/usr/bin:g" \
-		"${S}"/etc/binary.sh
-}
-
-src_compile() {
-	emake binary || die "make binary failed"
-}
-
-src_install() {
-	insinto /usr/lib/rcsb/data/binary
-	doins data/binary/* || die
-	insinto /usr/lib/rcsb/data/ascii
-	doins data/ascii/* || die
-
-	echo "RCSBROOT=\"/usr/lib/rcsb\"" > "${T}"/env.d
-	newenvd "${T}"/env.d 50validation
-}