diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2010-07-06 12:07:57 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2010-07-06 12:07:57 +0000 |
| commit | 3756f890dc1e78d9fc957efefeeac866b248bc17 (patch) | |
| tree | 8a5fb55191c5d7fa72f2927303039bd677fb9f8b /sci-chemistry | |
| parent | ppc64 stable wrt #322631 (diff) | |
| download | historical-3756f890dc1e78d9fc957efefeeac866b248bc17.tar.gz historical-3756f890dc1e78d9fc957efefeeac866b248bc17.tar.bz2 historical-3756f890dc1e78d9fc957efefeeac866b248bc17.zip | |
Version Bump
Package-Manager: portage-2.2_rc67/cvs/Linux x86_64
Diffstat (limited to 'sci-chemistry')
| -rw-r--r-- | sci-chemistry/mustang/ChangeLog | 9 | ||||
| -rw-r--r-- | sci-chemistry/mustang/Manifest | 14 | ||||
| -rw-r--r-- | sci-chemistry/mustang/mustang-3.2.1.ebuild | 44 |
3 files changed, 64 insertions, 3 deletions
diff --git a/sci-chemistry/mustang/ChangeLog b/sci-chemistry/mustang/ChangeLog index befb97d8315e..761ecc12aa11 100644 --- a/sci-chemistry/mustang/ChangeLog +++ b/sci-chemistry/mustang/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-chemistry/mustang -# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/ChangeLog,v 1.5 2008/12/19 20:22:42 loki_val Exp $ +# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/ChangeLog,v 1.6 2010/07/06 12:07:57 jlec Exp $ + +*mustang-3.2.1 (06 Jul 2010) + + 06 Jul 2010; Justin Lecher <jlec@gentoo.org> +mustang-3.2.1.ebuild: + Version Bump 19 Dec 2008; Peter Alfredsen <loki_val@gentoo.org> +files/mustang-3-gcc43.patch, mustang-3.ebuild: diff --git a/sci-chemistry/mustang/Manifest b/sci-chemistry/mustang/Manifest index 47ceffa2d591..2eb36519bbdc 100644 --- a/sci-chemistry/mustang/Manifest +++ b/sci-chemistry/mustang/Manifest @@ -1,5 +1,17 @@ +-----BEGIN PGP SIGNED MESSAGE----- +Hash: SHA1 + AUX mustang-3-gcc43.patch 2262 RMD160 d2f9d6de98f679af3b15507b42a410f1e0ba7e08 SHA1 532517644ceaaa0e4263cb04e78f3f47df450592 SHA256 2d9ec5f36d069e51909d56a58003c51bcd409c78946712753d313192c48558b2 +DIST mustang-3.2.1.tar 788480 RMD160 15de074d928aa09dda1543778f33b4b82dcc4c28 SHA1 11e47f853374d9ebd6c3a8187cb01f8e9f401bfe SHA256 29987d88eacc29e772ebf3d41eeac8b2d160e715f35b1a1a0eff462ea462042d DIST mustang_v.3.tgz 164752 RMD160 e90e55a0cf31955277a68e51f91bc1e00417dacb SHA1 d6e34ecc3094ec1f2c1dbce703a572bf75f406dc SHA256 6d35597930c456d03bb05d644408fd00b1e060d9c8f83353f33b06a42654f552 +EBUILD mustang-3.2.1.ebuild 1081 RMD160 7d7688473e00a0222002a513d9fc7d29555580f3 SHA1 3348ac0cfeaa795dcf294fe954f2cff6738bc0d7 SHA256 fde8b498c991e6eaf77486eebdc265eaf46d1caac3affc43b825eff3110195db EBUILD mustang-3.ebuild 1126 RMD160 e7346977f2dd6b295021c7508b9572cb4438ccea SHA1 b1b0f9443f4d61a3fcb0b2a264769fcf73881421 SHA256 7153751c03d8d4506c37424de8d09c27e36d9a9c1320f44e1531c2244df5a178 -MISC ChangeLog 1011 RMD160 58e24b4585bf7bfabee3572aae147f1ae9112b7f SHA1 77d8d59f960271506afcbb3e673b6270062de0fd SHA256 c4ff86829ae8bf7bcc93118e7f5f9ab01bb48ed8f1d7614218d1f0a132c6deea +MISC ChangeLog 1123 RMD160 0f6c77509794497ac5e383e289800c1a2dde51aa SHA1 ad7aacb695ab4f471e61f21d7a659bf85f2007da SHA256 54bf7f8da60265f16242902d65a5067a0d765c2e9ab52ddc356bf243631a21a5 MISC metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 SHA1 cb0b513473c0348f4f6f6cd9a132e4884155fddb SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852 +-----BEGIN PGP SIGNATURE----- +Version: GnuPG v2.0.15 (GNU/Linux) + +iEYEARECAAYFAkwzHKMACgkQgAnW8HDreRYz/gCggD9RQS0sZ8yJOxJiUsGHJ7yG +5ccAoM8T9KE3NopAwN8c1XH9QylDlRUk +=BluN +-----END PGP SIGNATURE----- diff --git a/sci-chemistry/mustang/mustang-3.2.1.ebuild b/sci-chemistry/mustang/mustang-3.2.1.ebuild new file mode 100644 index 000000000000..b0dc9ec7c9e4 --- /dev/null +++ b/sci-chemistry/mustang/mustang-3.2.1.ebuild @@ -0,0 +1,44 @@ +# Copyright 1999-2010 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/mustang-3.2.1.ebuild,v 1.1 2010/07/06 12:07:57 jlec Exp $ + +EAPI="3" + +inherit base toolchain-funcs + +MY_PN="MUSTANG" +SRC_P="${PN}_v${PV}" +MY_P="${MY_PN}_v${PV}" + +DESCRIPTION="MUltiple STructural AligNment AlGorithm." +HOMEPAGE="http://www.cs.mu.oz.au/~arun/mustang/" +SRC_URI="http://www.csse.unimelb.edu.au/~arun/${PN}/${SRC_P}.tgz -> ${P}.tar" + +LICENSE="BSD" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +S="${WORKDIR}/${MY_P}" + +src_compile() { + emake \ + CPP=$(tc-getCXX) \ + CPPFLAGS="${CXXFLAGS}" \ + LDFLAGS="${LDFLAGS}" \ + || die "emake failed" +} + +src_test() { + ./bin/${P} -f ./data/test/test_zf-CCHH || die +} + +src_install() { + newbin bin/${P} mustang || die +} + +pkg_postinst() { + elog "If you use this program for an academic paper, please cite:" + elog "Arun S. Konagurthu, James C. Whisstock, Peter J. Stuckey, and Arthur M. Lesk" + elog "Proteins: Structure, Function, and Bioinformatics. 64(3):559-574, Aug. 2006" +} |