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authorOlivier Fisette <ribosome@gentoo.org>2005-01-30 16:50:04 +0000
committerOlivier Fisette <ribosome@gentoo.org>2005-01-30 16:50:04 +0000
commite749e3d35e3df046b96234c2b92fdc6544fdbcbf (patch)
treec10b8129ee37cd023bf83bd749e67cff74999c4e /sci-biology
parentadded ~amd64 to KEYWORDS. fixes #79892 (diff)
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Ebuild cleanup
Package-Manager: portage-2.0.51-r15
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/ncbi-tools/ChangeLog6
-rw-r--r--sci-biology/ncbi-tools/Manifest4
-rw-r--r--sci-biology/ncbi-tools/ncbi-tools-20041020.ebuild52
3 files changed, 36 insertions, 26 deletions
diff --git a/sci-biology/ncbi-tools/ChangeLog b/sci-biology/ncbi-tools/ChangeLog
index bd3ddbd3feef..d388436387a7 100644
--- a/sci-biology/ncbi-tools/ChangeLog
+++ b/sci-biology/ncbi-tools/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/ncbi-tools
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.5 2005/01/19 00:16:44 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.6 2005/01/30 16:50:04 ribosome Exp $
+
+ 30 Jan 2005; Olivier Fisette <ribosome@gentoo.org>
+ ncbi-tools-20041020.ebuild:
+ Ebuild cleanup.
*ncbi-tools-20041020 (18 Jan 2005)
diff --git a/sci-biology/ncbi-tools/Manifest b/sci-biology/ncbi-tools/Manifest
index e2966f1d1385..435a00a9115a 100644
--- a/sci-biology/ncbi-tools/Manifest
+++ b/sci-biology/ncbi-tools/Manifest
@@ -1,6 +1,6 @@
-MD5 52d088f2cc0348c255592c64225edbe7 ncbi-tools-20041020.ebuild 5784
+MD5 1d68ef6c4e8e4e1cf7a9f8debba9d35f ncbi-tools-20041020.ebuild 5656
MD5 dd68eeb2bba477966094fa5262d31bb2 ncbi-tools-20040616.ebuild 5783
-MD5 925e80381abdba82df43a942366f1e7b ChangeLog 4497
+MD5 5f6d23cf3c3cfc01f923f160eba7bfbf ChangeLog 4599
MD5 e8b4df3df76800c376905734d8043cfa metadata.xml 216
MD5 23986a001c85eb8c2c319aacfa9cb40c files/ncbirc 33
MD5 6e3486cc782a091aa528a3e3f01192fc files/digest-ncbi-tools-20040616 144
diff --git a/sci-biology/ncbi-tools/ncbi-tools-20041020.ebuild b/sci-biology/ncbi-tools/ncbi-tools-20041020.ebuild
index f6a3ec44fe93..b3cb0537f496 100644
--- a/sci-biology/ncbi-tools/ncbi-tools-20041020.ebuild
+++ b/sci-biology/ncbi-tools/ncbi-tools-20041020.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20041020.ebuild,v 1.1 2005/01/19 00:16:44 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20041020.ebuild,v 1.2 2005/01/30 16:50:04 ribosome Exp $
inherit flag-o-matic toolchain-funcs
@@ -40,8 +40,9 @@ src_unpack() {
if ! use X; then
cd ${S}/make
- sed -e "s:\#set HAVE_OGL=0:set HAVE_OGL=0:" -i makedis.csh
- sed -e "s:\#set HAVE_MOTIF=0:set HAVE_MOTIF=0:" -i makedis.csh
+ sed -e "s:\#set HAVE_OGL=0:set HAVE_OGL=0:" \
+ -e "s:\#set HAVE_MOTIF=0:set HAVE_MOTIF=0:" \
+ -i makedis.csh || die
else
if use x86; then
# X applications segfault on startup on x86 with -O3.
@@ -52,40 +53,45 @@ src_unpack() {
# Apply user C flags...
cd ${S}/platform
# ... on x86...
- sed -i -e "s/NCBI_CFLAGS1 = -c/NCBI_CFLAGS1 = -c ${CFLAGS}/" linux-x86.ncbi.mk
- sed -i -e "s/NCBI_LDFLAGS1 = -O3 -mcpu=pentiumpro/NCBI_LDFLAGS1 = ${CFLAGS}/" linux-x86.ncbi.mk
- sed -i -e "s/NCBI_OPTFLAG = -O3 -mcpu=pentiumpro/NCBI_OPTFLAG = ${CFLAGS}/" linux-x86.ncbi.mk
+ sed -e "s/NCBI_CFLAGS1 = -c/NCBI_CFLAGS1 = -c ${CFLAGS}/" \
+ -e "s/NCBI_LDFLAGS1 = -O3 -mcpu=pentiumpro/NCBI_LDFLAGS1 = ${CFLAGS}/" \
+ -e "s/NCBI_OPTFLAG = -O3 -mcpu=pentiumpro/NCBI_OPTFLAG = ${CFLAGS}/" \
+ -i linux-x86.ncbi.mk || die
# ... on alpha...
- sed -i -e "s/NCBI_CFLAGS1 = -c/NCBI_CFLAGS1 = -c ${CFLAGS}/" linux-alpha.ncbi.mk
- sed -i -e "s/NCBI_LDFLAGS1 = -O3 -mieee/NCBI_LDFLAGS1 = -mieee ${CFLAGS}/" linux-alpha.ncbi.mk
- sed -i -e "s/NCBI_OPTFLAG = -O3 -mieee/NCBI_OPTFLAG = -mieee ${CFLAGS}/" linux-alpha.ncbi.mk
+ sed -e "s/NCBI_CFLAGS1 = -c/NCBI_CFLAGS1 = -c ${CFLAGS}/" \
+ -e "s/NCBI_LDFLAGS1 = -O3 -mieee/NCBI_LDFLAGS1 = -mieee ${CFLAGS}/" \
+ -e "s/NCBI_OPTFLAG = -O3 -mieee/NCBI_OPTFLAG = -mieee ${CFLAGS}/" \
+ -i linux-alpha.ncbi.mk || die
# ... on hppa...
- sed -i -e "s/NCBI_CFLAGS1 = -c/NCBI_CFLAGS1 = -c ${CFLAGS}/" hppalinux.ncbi.mk
- sed -i -e "s/NCBI_LDFLAGS1 = -O2/NCBI_LDFLAGS1 = ${CFLAGS}/" hppalinux.ncbi.mk
- sed -i -e "s/NCBI_OPTFLAG = -O2/NCBI_OPTFLAG = ${CFLAGS}/" hppalinux.ncbi.mk
+ sed -e "s/NCBI_CFLAGS1 = -c/NCBI_CFLAGS1 = -c ${CFLAGS}/" \
+ -e "s/NCBI_LDFLAGS1 = -O2/NCBI_LDFLAGS1 = ${CFLAGS}/" \
+ -e "s/NCBI_OPTFLAG = -O2/NCBI_OPTFLAG = ${CFLAGS}/" \
+ -i hppalinux.ncbi.mk || die
# ... on ppc...
- sed -i -e "s/NCBI_CFLAGS1 = -c/NCBI_CFLAGS1 = -c ${CFLAGS}/" ppclinux.ncbi.mk
- sed -i -e "s/NCBI_LDFLAGS1 = -O2/NCBI_LDFLAGS1 = ${CFLAGS}/" ppclinux.ncbi.mk
- sed -i -e "s/NCBI_OPTFLAG = -O2/NCBI_OPTFLAG = ${CFLAGS}/" ppclinux.ncbi.mk
+ sed -e "s/NCBI_CFLAGS1 = -c/NCBI_CFLAGS1 = -c ${CFLAGS}/" \
+ -e "s/NCBI_LDFLAGS1 = -O2/NCBI_LDFLAGS1 = ${CFLAGS}/" \
+ -e "s/NCBI_OPTFLAG = -O2/NCBI_OPTFLAG = ${CFLAGS}/" \
+ -i ppclinux.ncbi.mk || die
# ... on generic Linux.
- sed -i -e "s/NCBI_CFLAGS1 = -c/NCBI_CFLAGS1 = -c ${CFLAGS}/" linux.ncbi.mk
- sed -i -e "s/NCBI_LDFLAGS1 = -O3/NCBI_LDFLAGS1 = ${CFLAGS}/" linux.ncbi.mk
- sed -i -e "s/NCBI_OPTFLAG = -O3/NCBI_OPTFLAG = ${CFLAGS}/" linux.ncbi.mk
+ sed -e "s/NCBI_CFLAGS1 = -c/NCBI_CFLAGS1 = -c ${CFLAGS}/" \
+ -e "s/NCBI_LDFLAGS1 = -O3/NCBI_LDFLAGS1 = ${CFLAGS}/" \
+ -e "s/NCBI_OPTFLAG = -O3/NCBI_OPTFLAG = ${CFLAGS}/" \
+ -i linux.ncbi.mk || die
# Put in our MAKEOPTS (doesn't work).
# sed -e "s:make \$MFLG:make ${MAKEOPTS}:" -i ncbi/make/makedis.csh
# Set C compiler...
# ... on x86...
- sed -i -e "s/NCBI_CC = gcc/NCBI_CC = $(tc-getCC)/" linux-x86.ncbi.mk
+ sed -i -e "s/NCBI_CC = gcc/NCBI_CC = $(tc-getCC)/" linux-x86.ncbi.mk || die
# ... on alpha...
- sed -i -e "s/NCBI_CC = gcc/NCBI_CC = $(tc-getCC)/" linux-alpha.ncbi.mk
+ sed -i -e "s/NCBI_CC = gcc/NCBI_CC = $(tc-getCC)/" linux-alpha.ncbi.mk || die
# ... on hppa...
- sed -i -e "s/NCBI_CC = gcc/NCBI_CC = $(tc-getCC)/" hppalinux.ncbi.mk
+ sed -i -e "s/NCBI_CC = gcc/NCBI_CC = $(tc-getCC)/" hppalinux.ncbi.mk || die
# ... on ppc...
- sed -i -e "s/NCBI_CC = gcc/NCBI_CC = $(tc-getCC)/" ppclinux.ncbi.mk
+ sed -i -e "s/NCBI_CC = gcc/NCBI_CC = $(tc-getCC)/" ppclinux.ncbi.mk || die
# ... on generic Linux.
- sed -i -e "s/NCBI_CC = gcc/NCBI_CC = $(tc-getCC)/" linux.ncbi.mk
+ sed -i -e "s/NCBI_CC = gcc/NCBI_CC = $(tc-getCC)/" linux.ncbi.mk || die
}
src_compile() {