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authorMarkos Chandras <hwoarang@gentoo.org>2011-02-11 19:47:08 +0000
committerMarkos Chandras <hwoarang@gentoo.org>2011-02-11 19:47:08 +0000
commit969853f03e5dd06f80a7fc4b03064bb99f4672b1 (patch)
tree977051635dcdbbf56568c9ba78781ab6fdc7a75d /sci-biology
parentRemove unnecessary gnome-base/libgnomeui depend. (diff)
downloadhistorical-969853f03e5dd06f80a7fc4b03064bb99f4672b1.tar.gz
historical-969853f03e5dd06f80a7fc4b03064bb99f4672b1.tar.bz2
historical-969853f03e5dd06f80a7fc4b03064bb99f4672b1.zip
Stable on amd64 wrt bug #353566
Package-Manager: portage-2.1.9.39/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/eugene/Manifest24
-rw-r--r--sci-biology/samtools/ChangeLog7
-rw-r--r--sci-biology/samtools/Manifest24
-rw-r--r--sci-biology/samtools/samtools-0.1.12.ebuild6
-rw-r--r--sci-biology/vaal/Manifest24
5 files changed, 74 insertions, 11 deletions
diff --git a/sci-biology/eugene/Manifest b/sci-biology/eugene/Manifest
index b0e088999b48..4cdbc1ef4a44 100644
--- a/sci-biology/eugene/Manifest
+++ b/sci-biology/eugene/Manifest
@@ -1,8 +1,28 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA512
+
AUX eugene-3.6-overflow.patch 252 RMD160 7fc29f8e454ade0a9df101a57d8958599ba456f3 SHA1 9e6cf67741f09c2bff73c3201b0baec0a749ee05 SHA256 cc8795d5f4525a299bc3e17da1e26c1e5fe3ef0c2371c5bf9de36b5037972fc7
AUX eugene-3.6-plugins.patch 1784 RMD160 750e439ac0b42659bb333882123e6e43a3f6f4f8 SHA1 b906b029f4892cd8686894877905be6c804b3709 SHA256 0ec9c0d2bf6009e89612c3d95711b211aefc267d3eb6b75bc6279318256bc46d
DIST eugene-3.5g.tar.gz 5439002 RMD160 30ea0a7862e2d8c4a52a2526d00e1e5002fec244 SHA1 d8575c499f70db83782ace40e6f7412410c35a4d SHA256 7837619bcd03b89123e4a03c43fa74060251d98f7bc503de0d92ba78e9efefac
DIST eugene-3.6.tar.gz 5589654 RMD160 337c492ab0b407cf0c80238d5a04f3816f982536 SHA1 7cb66bcf64b0f532f38b666bd6a03ed17c512986 SHA256 731757d65f182e2eb2a18ee1fb2e710519a705aa91ef268136053698e07cb227
EBUILD eugene-3.5g.ebuild 967 RMD160 c4e15d607702d93cdd4c6b9738bc33145a2c16a2 SHA1 6824a87444222b550d6f345e9d10c61abd802ad3 SHA256 2dfb0351ce49e4078d985228461082ed2504baf72cf0260bbf8ed45a5f3a3a78
-EBUILD eugene-3.6-r1.ebuild 1136 RMD160 d0c28ab52f363e810049400d6271e90c0be408ff SHA1 bc1df74408834c975b212ab6dd4419f7f04e3643 SHA256 c6d977c22ea50fd5948a61b8f7a228b4158c9ce9c9c80c1f652c2a01701118f2
-MISC ChangeLog 1240 RMD160 33b61d761019a9b988231378c2ca35342f8b65b1 SHA1 92e99484a6b9761865abda1ee71f3fb7042b0ada SHA256 03074b48dae8fe8ab0701307b63d1f039a6e97117e38612bf526e1abf339baf9
+EBUILD eugene-3.6-r1.ebuild 1133 RMD160 9a7186c7e7559ae2b9de029b578161277a1a0d16 SHA1 b058dcf27f6b357509e1c33b5ae1d985cb94633c SHA256 fac2a87e98ac975beb46dc1062bfa16462272cf6fadd946fce2a6c5a302a5cca
+MISC ChangeLog 1348 RMD160 f2b8e78f9e40c6f542ae21b8fbd6a7d0756643fd SHA1 1b71b483351e69c74ec7229dcdc132d32179f697 SHA256 56b713ca173008dcfbf5623878d843878089e8dd29e195bc4c44df7172497ddc
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.17 (GNU/Linux)
+
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+o9HYd2y2lJdARLWMNTNS
+=eMW3
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/samtools/ChangeLog b/sci-biology/samtools/ChangeLog
index 2cff1cfd087f..3b4f55f9d8f4 100644
--- a/sci-biology/samtools/ChangeLog
+++ b/sci-biology/samtools/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/samtools
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/samtools/ChangeLog,v 1.1 2010/12/21 17:05:50 weaver Exp $
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/samtools/ChangeLog,v 1.2 2011/02/11 19:47:08 hwoarang Exp $
+
+ 11 Feb 2011; Markos Chandras <hwoarang@gentoo.org> samtools-0.1.12.ebuild:
+ Stable on amd64 wrt bug #353566
*samtools-0.1.12 (21 Dec 2010)
diff --git a/sci-biology/samtools/Manifest b/sci-biology/samtools/Manifest
index d095dfc996c8..5c2d8862dbc7 100644
--- a/sci-biology/samtools/Manifest
+++ b/sci-biology/samtools/Manifest
@@ -1,4 +1,24 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA512
+
DIST samtools-0.1.12a.tar.bz2 355633 RMD160 e2732e61b216bc2d8e6a1c81aa91c34f296cef29 SHA1 d517cd189aa714251a0e43cb83dea3ae0f29bffa SHA256 377ed5cd2a4bb2b1ad572ca6fcafdd8ed644b67f01ab00fa020618fac11e59ac
-EBUILD samtools-0.1.12.ebuild 828 RMD160 32f223f4ee5a3f57300be416522d4f5118bb156d SHA1 7616b45e8b8cd4881334c2d194e4eb97d25a9bb9 SHA256 203ee24b6fd32451e8beeaa95f7a2c5019ccf3fda3d1a30f2c71e8a7e990f027
-MISC ChangeLog 535 RMD160 3a7ec204c640c3a6fb781569cc4274baa8c3e848 SHA1 d117e756226ba370173ccd3cc436af68ae5e8adf SHA256 ec6cc5727894f7b2045648945a590c4bc8deac5efe9b6c2e7dac382c702a594f
+EBUILD samtools-0.1.12.ebuild 829 RMD160 4054bbfe088aef41fe0d236c3f13fccbdd1a2ef7 SHA1 eb18357b6d033555f77f46b3c960b308f2eede4b SHA256 48e8d9c3bb975c56db7bce010f8bcad068427ed155860678b250aadbbd1e34b0
+MISC ChangeLog 649 RMD160 026efba7933afc497717778ea622ade75b62654a SHA1 5e1d07c1d55083fec4ca5e17bdd256a5f1c1c9f2 SHA256 54a9ce2a197c94e9eb39af44901b542d9424e81539fe7414ed498994acb11312
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.17 (GNU/Linux)
+
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+-----END PGP SIGNATURE-----
diff --git a/sci-biology/samtools/samtools-0.1.12.ebuild b/sci-biology/samtools/samtools-0.1.12.ebuild
index 632208936242..39927a936ebc 100644
--- a/sci-biology/samtools/samtools-0.1.12.ebuild
+++ b/sci-biology/samtools/samtools-0.1.12.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2010 Gentoo Foundation
+# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/samtools/samtools-0.1.12.ebuild,v 1.1 2010/12/21 17:05:50 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/samtools/samtools-0.1.12.ebuild,v 1.2 2011/02/11 19:47:08 hwoarang Exp $
EAPI="2"
@@ -13,7 +13,7 @@ SRC_URI="mirror://sourceforge/${PN}/${MY_P}.tar.bz2"
LICENSE="MIT"
SLOT="0"
IUSE=""
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="amd64 ~x86"
DEPEND=""
RDEPEND=""
diff --git a/sci-biology/vaal/Manifest b/sci-biology/vaal/Manifest
index 96d83f5f1a91..64d7b6c874a1 100644
--- a/sci-biology/vaal/Manifest
+++ b/sci-biology/vaal/Manifest
@@ -1,3 +1,6 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA512
+
AUX vaal-1.2-as-needed.patch 905 RMD160 5daf6a4603fb729bac33ad54cbf5a79be65860bd SHA1 ffae4e00b6cb0497e87cd09857c62ebe19449c79 SHA256 6d097b3b72d394753e194974acf98a347e7e7046aaf865949aa551f0ee08a1f2
AUX vaal-1.2-gcc-x86-no-autocast.patch 1877 RMD160 dbcac734c896600c89c7c2ab73abeb03374a0bad SHA1 607371fad2443a65151b15ad6f08d4462056415b SHA256 a365d038dffdf6ea1ece2a0e55426c436f457b3cb0e640345decb00f2849a285
AUX vaal-1.2-respect-flags.patch 1838 RMD160 fe1464f977dfd1abe34c736e19990eab5f413655 SHA1 a4b83b2896e3c92bba6182e173f204f374dcd433 SHA256 42a1435657533c39ef9011be722ee217d0823c0f5802aaf2365136fddae49866
@@ -6,6 +9,23 @@ DIST VAAL.1.2.tgz 978333 RMD160 f81c1a33348e7c2ef2a6b07c1ceeeda564b9b521 SHA1 f5
DIST VAAL.1.6.tgz 1096114 RMD160 d12115fe558831533e48570e7dd4c583e8ea4924 SHA1 ae490f7488374c468df1724b1a3eac64879c3e0c SHA256 4bfcd0825b14438ad72b9dbacc1e324d960bd25fc56b0d492bad59c9ff4205e6
DIST VAAL_manual.doc 48128 RMD160 08d809c847f1842483ed653df9bb6ed5ee1d10a8 SHA1 836f8be0f0200358131c23174eeca5d2d7454a68 SHA256 08b662105e8db41b33ea5d6626b58d5a5d793b1dd40fdc663a7068d9abacdc83
EBUILD vaal-1.2-r1.ebuild 1097 RMD160 67eef005074040c7c9e0192147cbbeff02c865c4 SHA1 67e80bb076583cd173b87c0c5028fad4cad47e59 SHA256 ca425d9f49cc25f8837a058cc760ecf27a892fe7cb702ba53171ec333c69e75a
-EBUILD vaal-1.6.ebuild 904 RMD160 3fc757f0a613ccc4854c307fa399e9dab70837de SHA1 8ead2f68bf14e1cc6079fc88597d35ac649127d6 SHA256 36bf8340e212afcc3b36c599e477a4dc5ef1c95da6825fab6f2b7f43b74ed155
-MISC ChangeLog 1141 RMD160 9af9fd226f926ccc1d6a436e7f484478debf499e SHA1 ec002f96b1adb1990ac902f1e2bb5a8921ba7bd5 SHA256 c37ee1a69ad38e7630eb57510e10bad5fff970f553aa6e84e7601eac12d743f6
+EBUILD vaal-1.6.ebuild 905 RMD160 b672c186c876061ca737893f24eaa0b890914fb9 SHA1 742d6f4b992602d81344b8a644412e95b2e34993 SHA256 d27c2df308c50e2c8e9b4ff3440ab986514576bb1be002a4d1adf8224319ee65
+MISC ChangeLog 1248 RMD160 779293e368d0af13f222aa8f23ca12779f08fcb4 SHA1 42458231c8deb4cb6afbe6b6c82d00ff8a69ce82 SHA256 8c0e918fcccd948f2985bbf1380164820ebc4a227e8b4cb42e45524d4b68d431
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.17 (GNU/Linux)
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