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authorBrandon Low <lostlogic@gentoo.org>2005-02-04 20:57:01 +0000
committerBrandon Low <lostlogic@gentoo.org>2005-02-04 20:57:01 +0000
commit76e70222f2658d0d93394e87da9d83c5b27685f2 (patch)
treec4a08092dc6128095612afa6b0eb75cc67673f28 /sci-biology
parentStable on alpha. (diff)
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Fix bug #79574. Add unitinfo target to initscript to get the status of each core on the system. Thanks to Yosef Meller <yosefm@gmail.com> for the idea and initial patch
Package-Manager: portage-2.0.51-r15
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/foldingathome/ChangeLog10
-rw-r--r--sci-biology/foldingathome/Manifest5
-rw-r--r--sci-biology/foldingathome/files/digest-foldingathome-5.0.2-r21
-rw-r--r--sci-biology/foldingathome/files/init-5.0.2-r255
-rw-r--r--sci-biology/foldingathome/foldingathome-5.0.2-r2.ebuild79
5 files changed, 148 insertions, 2 deletions
diff --git a/sci-biology/foldingathome/ChangeLog b/sci-biology/foldingathome/ChangeLog
index 225fc48ffdad..1a4b645d9f20 100644
--- a/sci-biology/foldingathome/ChangeLog
+++ b/sci-biology/foldingathome/ChangeLog
@@ -1,6 +1,14 @@
# ChangeLog for sci-biology/foldingathome
# Copyright 2002-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/foldingathome/ChangeLog,v 1.3 2005/02/03 17:14:46 lostlogic Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/foldingathome/ChangeLog,v 1.4 2005/02/04 20:57:01 lostlogic Exp $
+
+*foldingathome-5.0.2-r2 (04 Feb 2005)
+
+ 04 Feb 2005; Brandon Low <lostlogic@gentoo.org> +files/init-5.0.2-r2,
+ +foldingathome-5.0.2-r2.ebuild:
+ Fix bug #79574. Add unitinfo target to initscript to get the status of each
+ core on the system. Thanks to Yosef Meller <yosefm@gmail.com> for the idea
+ and initial patch
*foldingathome-5.0.2-r1 (03 Feb 2005)
diff --git a/sci-biology/foldingathome/Manifest b/sci-biology/foldingathome/Manifest
index 23e400835aff..186b00d4366b 100644
--- a/sci-biology/foldingathome/Manifest
+++ b/sci-biology/foldingathome/Manifest
@@ -1,12 +1,14 @@
MD5 0e1014eb4bdefeb4d6917bac1a827c2a foldingathome-4.0.0-r2.ebuild 1908
MD5 39f6c517e55816697980342d76e16838 foldingathome-5.0.2-r1.ebuild 2018
MD5 e5275a69ca715ca6a2fdddf88af0f01e foldingathome-4.0.0.ebuild 1452
-MD5 f6a7b8eee235ea661d3ffaf4d3641560 ChangeLog 4095
+MD5 3ff39fbdcf78b5fc7ac14160c9cafefb foldingathome-5.0.2-r2.ebuild 2020
+MD5 13e9c81cb0d4ff45adfc86352c3c3ca4 ChangeLog 4416
MD5 8c623e53daafa025137077c6b65815bd metadata.xml 156
MD5 27939420baefc20ad8e61e4a533aa7c6 foldingathome-5.0.2.ebuild 2014
MD5 a586f7af900f3c15982e59730e7e082a files/folding-conf.d 1125
MD5 91f88a421f87928d798002ede77fa8f9 files/initfolding 80
MD5 2f181dd626be0626fc9000536fd0d4c4 files/digest-foldingathome-5.0.2-r1 61
+MD5 2f181dd626be0626fc9000536fd0d4c4 files/digest-foldingathome-5.0.2-r2 61
MD5 76b9bbe1167870a4cd58351bc530cc87 files/folding-init.d 538
MD5 cd07557b5a0c08853562d0a5ae204d78 files/copy_client_config 756
MD5 9c93f287339458f575ee4c5d20fffdfe files/initfolding-r1 656
@@ -19,6 +21,7 @@ MD5 5c608b526b53375ad6003e76b9c8ba19 files/folding-init.d-r3 640
MD5 514c0c505246323c8abb6fa13a8671c7 files/folding-init.d-r4 1160
MD5 aec1f2de50cf95bf1797d61ae94b3b04 files/folding.sh 88
MD5 c4cfa6b5c8873285eda65eff62c0e26e files/init-5.0.2-r1 1188
+MD5 599d0e032a6eb16d6137a5fbcc1338e1 files/init-5.0.2-r2 1420
MD5 6c633c6cc20e087d9da4585c5d9563dc files/digest-foldingathome-4.0.0 66
MD5 2f181dd626be0626fc9000536fd0d4c4 files/digest-foldingathome-5.0.2 61
MD5 71ad6348b9f8b367f2417eddf75417c7 files/copy_client_config-5.0.2-r1 393
diff --git a/sci-biology/foldingathome/files/digest-foldingathome-5.0.2-r2 b/sci-biology/foldingathome/files/digest-foldingathome-5.0.2-r2
new file mode 100644
index 000000000000..44de62a3f7fd
--- /dev/null
+++ b/sci-biology/foldingathome/files/digest-foldingathome-5.0.2-r2
@@ -0,0 +1 @@
+MD5 4855e808fb94e6d2c5fde345aea0cdc3 FAH502-Linux.exe 249236
diff --git a/sci-biology/foldingathome/files/init-5.0.2-r2 b/sci-biology/foldingathome/files/init-5.0.2-r2
new file mode 100644
index 000000000000..a3bcf284448e
--- /dev/null
+++ b/sci-biology/foldingathome/files/init-5.0.2-r2
@@ -0,0 +1,55 @@
+#!/sbin/runscript
+# Copyright 1999-2004 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/foldingathome/files/init-5.0.2-r2,v 1.1 2005/02/04 20:57:01 lostlogic Exp $
+
+opts="${opts} unitinfo"
+
+unitinfo() {
+ do_config
+ for (($CPU; CPU > 0; CPU--)); do
+ einfo "CPU ${CPU} $(head -n1 /opt/foldingathome/client${CPU}/unitinfo.txt):"
+ sed -e '1,2d' /opt/foldingathome/client${CPU}/unitinfo.txt
+ done
+}
+
+do_config() {
+ if [ -z "${CPU}" ] || [ "${CPU}" == "0" ]; then
+ if [ -r /proc/cpuinfo ]; then
+ CPU=`grep processor </proc/cpuinfo | wc -l`
+ else
+ CPU=1
+ fi
+ fi
+}
+
+start() {
+ do_config
+ su foldingathome -c /opt/foldingathome/copy_client_config
+ for (($CPU; CPU > 0; CPU--)); do
+ ebegin "Starting Folding@Home on CPU ${CPU}"
+ cd /opt/foldingathome/client${CPU}/
+ nice -n 20 su foldingathome -c "/opt/foldingathome/client${CPU}/foldingathome ${FOLD_OPTS}" &>/dev/null &
+ eend $?
+ done
+}
+
+stop() {
+ do_config
+ for (($CPU; CPU > 0; CPU--)); do
+ ebegin "Stopping Folding@Home on CPU ${CPU}"
+ cd /opt/foldingathome/client${CPU}/
+ for I in FahCore*.exe; do
+ if ps ax|grep $I > /dev/null 2>&1; then
+ killall -q $I > /dev/null 2>&1
+ fi
+ done
+ sleep 1
+ if ps ax|grep '[/]opt[/]foldingathome/client${CPU}/' > /dev/null 2>&1; then
+ eend 1
+ else
+ eend 0
+ fi
+ done
+}
+
diff --git a/sci-biology/foldingathome/foldingathome-5.0.2-r2.ebuild b/sci-biology/foldingathome/foldingathome-5.0.2-r2.ebuild
new file mode 100644
index 000000000000..37d4ca8d0e95
--- /dev/null
+++ b/sci-biology/foldingathome/foldingathome-5.0.2-r2.ebuild
@@ -0,0 +1,79 @@
+# Copyright 1999-2005 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/foldingathome/foldingathome-5.0.2-r2.ebuild,v 1.1 2005/02/04 20:57:01 lostlogic Exp $
+
+# no version number on this install dir since upgrades will be using same dir
+# (data will be stored here too)
+I="/opt/foldingathome"
+
+inherit eutils
+
+DESCRIPTION="Help simulate protein folding at home"
+HOMEPAGE="http://folding.stanford.edu/"
+SRC_URI="http://www.stanford.edu/group/pandegroup/release/FAH502-Linux.exe"
+RESTRICT="nomirror"
+
+SLOT="0"
+IUSE=""
+LICENSE="as-is"
+KEYWORDS="~x86 ~amd64"
+
+DEPEND=">=sys-apps/baselayout-1.8.0
+ >=sys-libs/glibc-2.3.0
+ amd64? ( app-emulation/emul-linux-x86-baselibs )"
+
+S="${WORKDIR}"
+
+src_unpack() {
+ cp "${DISTDIR}/${A}" ${PN}
+}
+
+src_install() {
+ exeinto ${I}
+ newexe ${FILESDIR}/initfolding-r2 initfolding
+ newexe ${FILESDIR}/copy_client_config-${PV}-r1 copy_client_config
+
+ # Clients
+ exeinto ${I}/client1
+ doexe foldingathome
+ exeinto ${I}/client2
+ doexe foldingathome
+ exeinto ${I}/client3
+ doexe foldingathome
+ exeinto ${I}/client4
+ doexe foldingathome
+ exeinto ${I}/client5
+ doexe foldingathome
+ exeinto ${I}/client6
+ doexe foldingathome
+ exeinto ${I}/client7
+ doexe foldingathome
+ exeinto ${I}/client8
+ doexe foldingathome
+ exeinto /etc/init.d
+ newexe ${FILESDIR}/init-${PVR} foldingathome
+
+ insinto /etc/conf.d
+ newins ${FILESDIR}/folding-conf.d-r1 foldingathome
+}
+
+pkg_preinst() {
+ # the bash shell is important for "su -c" in init script
+ enewuser foldingathome -1 /bin/bash /opt/foldingathome
+}
+
+pkg_postinst() {
+ chown -R foldingathome:nogroup /opt/foldingathome
+ einfo "To run Folding@home in the background at boot:"
+ einfo " rc-update add foldingathome default"
+ einfo ""
+ einfo "Please run ${I}/initfolding to configure your client"
+ einfo "and edit /etc/conf.d/foldingathome for options"
+ einfo ""
+}
+
+pkg_postrm() {
+ einfo "Folding@home data files were not removed."
+ einfo " Remove them manually from ${I}"
+ einfo ""
+}