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authorDonnie Berkholz <dberkholz@gentoo.org>2006-03-08 00:11:55 +0000
committerDonnie Berkholz <dberkholz@gentoo.org>2006-03-08 00:11:55 +0000
commit72557c2cc43c0e5bc87fad35931e419a285a3198 (patch)
tree62f6b3801c5ac70c019a112ab3cd8bff303b63bb /sci-biology
parentVersion bump. (diff)
downloadhistorical-72557c2cc43c0e5bc87fad35931e419a285a3198.tar.gz
historical-72557c2cc43c0e5bc87fad35931e419a285a3198.tar.bz2
historical-72557c2cc43c0e5bc87fad35931e419a285a3198.zip
Bump to most recent modification date on upstream's unversioned tarball. Fixes problem with file-open dialog not finding files, among others.
Package-Manager: portage-2.1_pre5-r2
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/seaview/ChangeLog11
-rw-r--r--sci-biology/seaview/Manifest26
-rw-r--r--sci-biology/seaview/files/digest-seaview-200602133
-rw-r--r--sci-biology/seaview/seaview-20060213.ebuild31
4 files changed, 65 insertions, 6 deletions
diff --git a/sci-biology/seaview/ChangeLog b/sci-biology/seaview/ChangeLog
index 14bd747e3087..42299581ebbf 100644
--- a/sci-biology/seaview/ChangeLog
+++ b/sci-biology/seaview/ChangeLog
@@ -1,6 +1,13 @@
# ChangeLog for sci-biology/seaview
-# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.6 2005/08/07 14:41:58 ribosome Exp $
+# Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.7 2006/03/08 00:11:54 spyderous Exp $
+
+*seaview-20060213 (08 Mar 2006)
+
+ 08 Mar 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ +seaview-20060213.ebuild:
+ Bump to most recent modification date on upstream's unversioned tarball.
+ Fixes problem with file-open dialog not finding files, among others.
*seaview-20050713 (07 Aug 2005)
diff --git a/sci-biology/seaview/Manifest b/sci-biology/seaview/Manifest
index 472192170961..44096a1570bb 100644
--- a/sci-biology/seaview/Manifest
+++ b/sci-biology/seaview/Manifest
@@ -1,6 +1,24 @@
-MD5 ad474bbfb4b096697e33e22e150fd489 seaview-20050713.ebuild 911
-MD5 680ece30974abad6f113a0f92824ea23 seaview-20041220.ebuild 882
-MD5 55363db428f3719eb3bcfd88b01297b5 ChangeLog 1712
-MD5 7b87a6c33de5295e356b67218bd4fba9 metadata.xml 614
+MD5 361b20fd81d45294aa70693a60901993 ChangeLog 1976
+RMD160 fd061fc389e260c4deebb91bd726b61a02290406 ChangeLog 1976
+SHA256 2c57e828bab77e0ac417b7c18f73f5cc59255885f3cac38d753af781081c6098 ChangeLog 1976
MD5 d13f3abed50e95fdd7a2ced7815ebdc3 files/digest-seaview-20041220 69
+RMD160 572bdb6fce1d9265b330e23fe16b2351dd1aca73 files/digest-seaview-20041220 69
+SHA256 55c596b8feb348ae50763670f4e7a341f0f4d235a01f5bc0fc208e71a927f23c files/digest-seaview-20041220 69
MD5 fa0046ff72f7bee09dbf48f79280345d files/digest-seaview-20050713 69
+RMD160 695a44e972f0524d00734f9ed7192c80ae8356ba files/digest-seaview-20050713 69
+SHA256 50541ce3f1c006c1c6f25483381cbedd521d7e568105708666eab1a2f935a61d files/digest-seaview-20050713 69
+MD5 12f7be8bda68958f3fd458149b5cdb6a files/digest-seaview-20060213 253
+RMD160 2c5874f5e8f1e778044c4f1c462ae158c9aaaf25 files/digest-seaview-20060213 253
+SHA256 b91aecb8cac59c15a14b1e5f925c8b065f3a929f636adbea74e5331fbe4153e5 files/digest-seaview-20060213 253
+MD5 7b87a6c33de5295e356b67218bd4fba9 metadata.xml 614
+RMD160 2d85f3408f8dc02063c111c5e41a149f637ef6b0 metadata.xml 614
+SHA256 ad0460ad24070f0337367a8dd91c16959e8f8ad3b739121c9772a25ef78ea4bf metadata.xml 614
+MD5 680ece30974abad6f113a0f92824ea23 seaview-20041220.ebuild 882
+RMD160 76a5d3e970c20d034ac831a7b01c7665e4450bc8 seaview-20041220.ebuild 882
+SHA256 bfd3296f1250f436767fe8ab774d9e4de08febd201e61fe7515f120fff98fc3d seaview-20041220.ebuild 882
+MD5 ad474bbfb4b096697e33e22e150fd489 seaview-20050713.ebuild 911
+RMD160 c4a662fb8b4f13bd7e9bccfa0bd65e56792a5bdc seaview-20050713.ebuild 911
+SHA256 696f69974a42e99a1f60080bbac4d19f80d94034fc29b47a026c4f77c8b1a521 seaview-20050713.ebuild 911
+MD5 bb7e5c881522e18af3c3376bed076d10 seaview-20060213.ebuild 912
+RMD160 c9f5472b0b098ebcd7a4984fbb90c00eb886478e seaview-20060213.ebuild 912
+SHA256 5a60af1cf1603a3054362ee031bb6844b49a7af9a5a0d2e52f4140c547055af9 seaview-20060213.ebuild 912
diff --git a/sci-biology/seaview/files/digest-seaview-20060213 b/sci-biology/seaview/files/digest-seaview-20060213
new file mode 100644
index 000000000000..331a45c8c96d
--- /dev/null
+++ b/sci-biology/seaview/files/digest-seaview-20060213
@@ -0,0 +1,3 @@
+MD5 f44a1ea1ef0922e97fb26cbfeb80ca9d seaview-20060213.tar.bz2 114995
+RMD160 c3409b5e06f15e983db4912812381ee5d5894ea9 seaview-20060213.tar.bz2 114995
+SHA256 be058f53f07cec46978f10ddad8794bbe79762cf089d18b5cbe7cb6ed15c54fc seaview-20060213.tar.bz2 114995
diff --git a/sci-biology/seaview/seaview-20060213.ebuild b/sci-biology/seaview/seaview-20060213.ebuild
new file mode 100644
index 000000000000..2d9708b03041
--- /dev/null
+++ b/sci-biology/seaview/seaview-20060213.ebuild
@@ -0,0 +1,31 @@
+# Copyright 1999-2006 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20060213.ebuild,v 1.1 2006/03/08 00:11:54 spyderous Exp $
+
+DESCRIPTION="A graphical multiple sequence alignment editor"
+HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html"
+SRC_URI="mirror://gentoo/${P}.tar.bz2"
+LICENSE="public-domain"
+
+SLOT="0"
+KEYWORDS="~x86 ~ppc ~amd64"
+IUSE=""
+
+DEPEND="x11-libs/fltk
+ =media-libs/pdflib-6.0*
+ sci-biology/clustalw"
+
+src_compile() {
+ # Corrects location of libfltk.
+ CFLAGS="${CFLAGS} -c -I/usr/include/fltk-1.1"
+ sed -i -e "s%\"seaview.help\", %\"/usr/share/${PN}/seaview.help\", %" seaview.cxx || die
+ sed -i -e 's:-L$(FLTK)/lib:-L/usr/lib/fltk-1.1:' Makefile || die
+
+ emake -e || die
+}
+
+src_install() {
+ dobin seaview seaview_align.sh
+ insinto /usr/share/${PN}
+ doins protein.mase seaview.help
+}