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authorBrian Evans <grknight@gentoo.org>2014-07-30 01:13:01 +0000
committerBrian Evans <grknight@gentoo.org>2014-07-30 01:13:01 +0000
commit54a111f7f2fc5b6ad1e0a9caba801dcf2a875a4c (patch)
tree599d9de1b86c2c25855e5818873bd6fb326c5f2d /sci-biology
parentNon-maintainer commit. Update to use virtual/mysql for bug 505870 (diff)
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Non-maintainer commit. Update to use virtual/mysql wrt bug 508802
Package-Manager: portage-2.2.8-r1/cvs/Linux x86_64 Manifest-Sign-Key: 0x67C78E1D
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/emboss/ChangeLog9
-rw-r--r--sci-biology/emboss/Manifest24
-rw-r--r--sci-biology/emboss/emboss-6.0.1.ebuild4
-rw-r--r--sci-biology/emboss/emboss-6.1.0-r1.ebuild4
-rw-r--r--sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild6
-rw-r--r--sci-biology/emboss/emboss-6.3.1_p4.ebuild6
6 files changed, 30 insertions, 23 deletions
diff --git a/sci-biology/emboss/ChangeLog b/sci-biology/emboss/ChangeLog
index c9d8129d2fa4..b4243f3ae59d 100644
--- a/sci-biology/emboss/ChangeLog
+++ b/sci-biology/emboss/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/emboss
-# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.68 2012/11/19 10:36:45 jlec Exp $
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.69 2014/07/30 01:12:51 grknight Exp $
+
+ 30 Jul 2014; Brian Evans <grknight@gentoo.org> emboss-6.0.1.ebuild,
+ emboss-6.1.0-r1.ebuild, emboss-6.3.1_p4-r1.ebuild, emboss-6.3.1_p4.ebuild:
+ Non-maintainer commit. Update to use virtual/mysql wrt bug 508802
*emboss-6.3.1_p4-r1 (19 Nov 2012)
@@ -327,4 +331,3 @@
03 Sep 2003; <sediener@gentoo.org> emboss-2.7.1.ebuild:
Initial ebuild
-
diff --git a/sci-biology/emboss/Manifest b/sci-biology/emboss/Manifest
index bc6a1b11e25d..9e416a263085 100644
--- a/sci-biology/emboss/Manifest
+++ b/sci-biology/emboss/Manifest
@@ -1,5 +1,5 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA512
+Hash: SHA256
AUX 22emboss 110 SHA256 cf3bd3b8d2638a0cd14e57839033d63c855114a0e12883bbc7a5106b0cfc01ad SHA512 4ba3f49ac2dbe3cb80c39d15674d7437261341fb445c13ac46da8fb9d679948bf5883a99a0ef90bd6dc7f870547c245b61a8e0d88266af4edd260b69eb741df7 WHIRLPOOL d6cf646af57301b94c377701e19978cbe693aa10f5b9357027a1f4a63e0bab6870818c7ce9fde5d644c2c508607ff44603c1cdc9c22eb73435f3e25778f73cff
AUX 6.3.1_p4-unbundle-libs.patch 18988 SHA256 1f6170a8f4182792d145fd21b6b23d817ea9f5ea39ba77721947ae67a6b6927d SHA512 c11383cca08adbb597c45fd0c86106fa8c051e31807e8afc2daa428f44c023efa9bde0ae093c8711b7de650144c2511e8db67c627cb02d926b1ebb4ffc56a013 WHIRLPOOL a43a09086f08ce7fda67b155720eb0776ee79dc41fc4e4894f1b3e27fa05665e5b75a16066d238f661f7fefa4944b6cb107ade6eb3d8c6700d023d7fd55276e8
@@ -12,16 +12,20 @@ DIST EMBOSS-6.0.1.tar.gz 20204153 SHA256 3e352902aa9dab88bf486457ff23794f19398df
DIST EMBOSS-6.1.0.tar.gz 21968220 SHA256 033d205c108e10e314b1ca61ec026a4a7fec2780e8781da67b0e16825b63af41
DIST EMBOSS-6.3.1.tar.gz 23572243 SHA256 4f3290600a970c2a23a7e47f884d1fc8156ec40538f7191a6e83e23680d27a8d
DIST emboss-6.3.1_p4.patch.gz 4070 SHA256 61d1b62e3148541d496103711db6526ba76488a0899af2c98264b03bf8d6e24c
-EBUILD emboss-6.0.1.ebuild 3464 SHA256 07d3de4ae0a90d0603ad922d7ca6f5a6ecf702980c9ae10ae1b1cb62faac1fc2 SHA512 1f976edc01f212fb86c8622ed76c70669bfbfe10ad7616e7cc644f62696a336e95b0e79620a687dc48e7d97afa4c57b26f098b80f4845711c7f80076cceb8640 WHIRLPOOL 522962459273491ba22e3ea7e2cb7fe110d9a482c7fda96362f3a8aef19f7814fa43d061244b08e3dcbafccab3338eca5da91286368c3044a997b5fb8076806e
-EBUILD emboss-6.1.0-r1.ebuild 3699 SHA256 033af6abb3945862fd2d925435287a70a1b446e370cb5d1d38dc4913fc713517 SHA512 efc8a1178ce1a1115d6d67d9e000d4f435c3005940dc9c7e63aa3a0ae6074f71ae1aec7f6d234b5cfdbbc5510ae8e58341a81af09f9665d9f99b33c6ce9110d4 WHIRLPOOL bd60f5a4f729b0f8c73ca856b350d7cdd4ae1a232a14b1f220ce1deaf66aa52affe9480636074d3320fc841cfe942750c14f3a39acb262d6d6488e552206a328
-EBUILD emboss-6.3.1_p4-r1.ebuild 3550 SHA256 556d78a42f8a7a541e4d3bcb880ace4e4739dd3a9643830edf70c075a113c6f3 SHA512 607a571e9e676911cc20cb36f3fc2f6f6cb29956c0c12c87b6f9b16232f4d8d75802fe3091a92a7e4702eeb1b64e21b9543fe95d1f377993863b8ace419b1b19 WHIRLPOOL d8848bf40b36203e069cc825cf12dc96ea9864053fa54830dd23416f494848492e6e4b3667d7720eccee987d196f48141a900d7c0b3212195c2d92b8736a28b8
-EBUILD emboss-6.3.1_p4.ebuild 3517 SHA256 23c6b2823dc03d96699776293c045dc095e577bea903bb431de63bf800722dd5 SHA512 a9bacf64f26c63e5ff473e048fd72cdd554cfe4835bf3639b0dccb89f44547c5dca5a256da01c0f0f69da0fae53425b7162f2b945b433fb4e40bf6f413aa77a2 WHIRLPOOL f4ca3a13311f7956c3ef561bfd6f583dc0cfef2dcb4c0d6b61e1c944dab0238556d436940e21b40eb83e3fd207d0b8814a37f5c83c7a43f768008958dfbc8763
-MISC ChangeLog 11750 SHA256 526a0a624d9dad7a11b3d48053c4f431320ed514df23539f77c8cb9c3802b770 SHA512 ac2938824c32a983d76f823f4a8005ba21a9736df0abed3c51993c049de6abd729e24681aa45756d993a020809ea8bd7ab916eed9d92d69da8e9896d81d2e6ce WHIRLPOOL 65d8e358df5c34e8155282e5cbc8ea7cfc3daa9793d7592c66be66b762dfb4f63406afbcfa335febcbdfc0e070377bbff3941f702c68c51e1322e9592fe0fa62
+EBUILD emboss-6.0.1.ebuild 3462 SHA256 e0b2cc3fa1d46fce803a3054e5a7a37f3e8f532822fe5c4e27c5f13988f3bdfd SHA512 60f0b43ab3377791dd44553a4bbd9817fa498afa7ac1a11c334f20ae3d431aef4e35b9a1b38a572bd185ecb5cd29e69de24f13c90c36b689299bc5b2d2194932 WHIRLPOOL 2fe9a606dc570e8236898fbde67dac4b05ba19eb6c65bbfd13fefb11e6bc2e0fab19c39555cccbcdab734636b9f058f88529816e0878a3db8e40548610cceb0d
+EBUILD emboss-6.1.0-r1.ebuild 3697 SHA256 599e0cda62759ffe7eee70380f38535c3b293caeaba42e7d71e57f29dc562d05 SHA512 76e8d983d40f22932ff927b3ee4795d4fc960c8f9af51915a8015c1f2e5af8a8546025befbbe98482fbf07eb72b74259f6d3cfda9983fa2df4aee73319f38d3d WHIRLPOOL ffbc015fdae4041d27a238888e0bb432618014cf6aadbd736526d7f6d0413b72c78bca4efd991294bcd78879c289e4524906fcd1a41a5a2427dc9c537600e02b
+EBUILD emboss-6.3.1_p4-r1.ebuild 3555 SHA256 093103bed3e83fc957b70ac001ff9a6d7af0cff46a80ddbf1899f134fb61cf6d SHA512 9b1ba02ab3d3b56b34026a87fce697df55a64f73860596afcc2596deca95a94031a68a6119d5cc1d90d93616d05fcd4fefad07e129c5213dfb77acb0b6df3bbb WHIRLPOOL f78b7393667946a8d0ad7d16a85e14ef3f56ac7768ce39ba94856392d21a0fb4bbcf205080ea301cb2fdc8443354a31f713815cddfe89e205f098433aa1fe9f3
+EBUILD emboss-6.3.1_p4.ebuild 3516 SHA256 11a701f04f6995a337ea081330cd1fd57deb493ff169d27ff6b62ee8d4e3c869 SHA512 03a17c315963830f63a01e66bcd8f91a39cc37ebb9ea7be57e5e6cfdd42eaa4030555dfc5921545eadef8c31d9a0e5e76067881c16149b49f25809e186933caa WHIRLPOOL d70bd736c0e5bc99a8f593903355f3b2475aeb41e2eb42d4c4259d8c9bbe2f44935b7d572a15cc56b662332084cf97834c96a691b7b239e29586c5c09f1f5a2e
+MISC ChangeLog 11969 SHA256 69a91454ccbefebd531b6af9f73fc2f38c36b2db1dc90c2e40ada9bea27b2a14 SHA512 28c2677fb768f027cefd628f1e10528c6afc4d36e803bb10d00fa6452330ca07904f13b854025e954ee54a65312040c855847694c0996ced131bb51cd426c83a WHIRLPOOL 62d7283db5767f0c9b28153850782ef55e5c7723ddd18e3e63d6975956cf72dcd54552190314b88fba25d86ff5f7a03c73449c1f6ce21ca0adb40f64d1b34ece
MISC metadata.xml 924 SHA256 9a25a29f9ad98792903c439ad7dd4ec485e44e60e23beaf1fa4c209ea89be49b SHA512 1373628f4293e287705092d8d3dea2b44fed318d52d4171704f0b4199469eee45cf59f49155d12650f8081557bba4253f7266f61b5cb295c80f37fb940fd5156 WHIRLPOOL b5546eeac598092b59ca7f9734bfef77110b3ff21a541db3906e8915a1893c8d7189848ef0dd643e065b273c5034cdc441535ad1ffc21bc504c3566979a6a037
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+Version: GnuPG v2
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diff --git a/sci-biology/emboss/emboss-6.0.1.ebuild b/sci-biology/emboss/emboss-6.0.1.ebuild
index 31130037d520..c6979dcf971e 100644
--- a/sci-biology/emboss/emboss-6.0.1.ebuild
+++ b/sci-biology/emboss/emboss-6.0.1.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.0.1.ebuild,v 1.11 2011/10/20 08:46:56 xarthisius Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.0.1.ebuild,v 1.12 2014/07/30 01:12:51 grknight Exp $
EAPI=1
diff --git a/sci-biology/emboss/emboss-6.1.0-r1.ebuild b/sci-biology/emboss/emboss-6.1.0-r1.ebuild
index a8805ce34d6a..243f94a2bb37 100644
--- a/sci-biology/emboss/emboss-6.1.0-r1.ebuild
+++ b/sci-biology/emboss/emboss-6.1.0-r1.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.1.0-r1.ebuild,v 1.6 2011/10/20 08:46:56 xarthisius Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.1.0-r1.ebuild,v 1.7 2014/07/30 01:12:51 grknight Exp $
EAPI="3"
diff --git a/sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild b/sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild
index 119009d24004..21f1381bd5f4 100644
--- a/sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild
+++ b/sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2012 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild,v 1.1 2012/11/19 10:36:45 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.3.1_p4-r1.ebuild,v 1.2 2014/07/30 01:12:51 grknight Exp $
EAPI="4"
@@ -24,7 +24,7 @@ DEPEND="
dev-libs/libpcre:3
sci-libs/plplot
sys-libs/zlib
- mysql? ( dev-db/mysql )
+ mysql? ( virtual/mysql )
pdf? ( media-libs/libharu )
png? (
sys-libs/zlib
diff --git a/sci-biology/emboss/emboss-6.3.1_p4.ebuild b/sci-biology/emboss/emboss-6.3.1_p4.ebuild
index 382712c6ee1b..46c61f2a05fa 100644
--- a/sci-biology/emboss/emboss-6.3.1_p4.ebuild
+++ b/sci-biology/emboss/emboss-6.3.1_p4.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.3.1_p4.ebuild,v 1.6 2011/10/20 08:46:56 xarthisius Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.3.1_p4.ebuild,v 1.7 2014/07/30 01:12:51 grknight Exp $
EAPI="4"
@@ -24,7 +24,7 @@ DEPEND="
dev-libs/libpcre:3
sci-libs/plplot
sys-libs/zlib
- mysql? ( dev-db/mysql )
+ mysql? ( virtual/mysql )
pdf? ( media-libs/libharu )
png? (
sys-libs/zlib