Version bump. Set SUPPORT_PYTHON_ABIS.

Package-Manager: portage-15123-svn/cvs/Linux x86_64

3 files changed, 69 insertions, 12 deletions

diff --git a/sci-biology/biopython/ChangeLog b/sci-biology/biopython/ChangeLog
index e05ced52d1f6..f9a198987706 100644
--- a/sci-biology/biopython/ChangeLog
+++ b/sci-biology/biopython/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/biopython
 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v 1.38 2009/10/31 17:56:54 maekke Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v 1.39 2009/12/21 03:29:14 arfrever Exp $
+
+*biopython-1.53 (21 Dec 2009)
+
+  21 Dec 2009; Arfrever Frehtes Taifersar Arahesis <arfrever@gentoo.org>
+  +biopython-1.53.ebuild:
+  Version bump. Set SUPPORT_PYTHON_ABIS.
 
   31 Oct 2009; Markus Meier <maekke@gentoo.org> biopython-1.52.ebuild:
   amd64/x86 stable, bug #290931
diff --git a/sci-biology/biopython/Manifest b/sci-biology/biopython/Manifest
index bd0c8eb618cc..0e0fac77396a 100644
--- a/sci-biology/biopython/Manifest
+++ b/sci-biology/biopython/Manifest
@@ -1,20 +1,12 @@
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 AUX biopython-1.49-flex.patch 782 RMD160 a69deb13b97f80ec6aed7ec7975e0de4846fe2fa SHA1 dad1c962a632efeccbbec61b79feb71abccbe030 SHA256 ad957b435fc70b218a7a65eb492b0eae5f82b7c6371d2f1451c9dd714fa056dc
 AUX biopython-1.51-flex.patch 782 RMD160 a69deb13b97f80ec6aed7ec7975e0de4846fe2fa SHA1 dad1c962a632efeccbbec61b79feb71abccbe030 SHA256 ad957b435fc70b218a7a65eb492b0eae5f82b7c6371d2f1451c9dd714fa056dc
 DIST biopython-1.49.tar.gz 4148803 RMD160 3d6893cd788c39512a314345bb2ea441c715c17d SHA1 f2ea7f3b8985facdf8f4d4c86ee300e4a8f1a5fb SHA256 0d8876bef579dde2f53063b486bdbde62fc272bf33d1463753f27c5d31651236
 DIST biopython-1.51.tar.gz 5557548 RMD160 9136c75a8451af5f7576a63f11655353c38639c8 SHA1 1d48208fc0fd5549958fea3eac40d12f032a6473 SHA256 0ebf44e6376d7b44fb2857e751d388f30402d6a81798821e40a7f7b92a4b036b
 DIST biopython-1.52.tar.gz 5616821 RMD160 fbb1c58d90b9c6743f48148fde7a4762e9ba2036 SHA1 6dd295164a4cc0ff886e61bf29c798887c37f50c SHA256 670f9f2f73a98e87ba749b08671f46586b73f97d1f1af1df349ac849dc504df6
+DIST biopython-1.53.tar.gz 4284683 RMD160 9f49df8031cf2d60f4a77624dd6c188fb5c63418 SHA1 182c71358396261d86f8534b4a24f5d33673f80e SHA256 0db8bf8d37641fdfc6a8aac248de3d8cb4111e55484deb43f67e8d7ad082013f
 EBUILD biopython-1.49.ebuild 1331 RMD160 0605df9299d7330e18479fee64ecdaabeec20838 SHA1 2d4470d85e66d23ab6ab28751d22b5bbcfcd4181 SHA256 26dc2867b099275abb45e4663a2e742a7414066596c306a0137da864abb89c21
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+EBUILD biopython-1.53.ebuild 1491 RMD160 6deec7721f8c033a3fb5a4824a86341d7c9291b5 SHA1 cddb61c42ef986cc889d0683dcfeede12eac2edc SHA256 6593790171af908520d0d060c262f097292b17e741631650282aee9585fcd2fb
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diff --git a/sci-biology/biopython/biopython-1.53.ebuild b/sci-biology/biopython/biopython-1.53.ebuild
new file mode 100644
index 000000000000..9c53a58fc9c6
--- /dev/null
+++ b/sci-biology/biopython/biopython-1.53.ebuild
@@ -0,0 +1,59 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/biopython-1.53.ebuild,v 1.1 2009/12/21 03:29:14 arfrever Exp $
+
+EAPI="2"
+SUPPORT_PYTHON_ABIS="1"
+
+inherit base distutils eutils
+
+DESCRIPTION="Biopython - Python modules for computational molecular biology"
+HOMEPAGE="http://www.biopython.org http://pypi.python.org/pypi/biopython"
+SRC_URI="http://www.biopython.org/DIST/${P}.tar.gz"
+
+LICENSE="as-is"
+SLOT="0"
+KEYWORDS="~alpha ~amd64 ~ppc ~sparc ~x86"
+IUSE="mysql postgres"
+
+RDEPEND="dev-python/numpy
+	>=dev-python/reportlab-2.0
+	mysql? ( dev-python/mysql-python )
+	postgres? ( dev-python/psycopg )"
+DEPEND="${RDEPEND}
+	sys-devel/flex"
+RESTRICT_PYTHON_ABIS="3.*"
+
+PATCHES=(
+	"${FILESDIR}/${PN}-1.51-flex.patch"
+)
+
+DISTUTILS_USE_SEPARATE_SOURCE_DIRECTORIES="1"
+DOCS="CONTRIB DEPRECATED NEWS README"
+PYTHON_MODNAME="Bio BioSQL"
+
+src_compile() {
+	distutils_src_compile
+}
+
+src_test() {
+	cd Tests
+
+	testing() {
+		PYTHONPATH="$(ls -d ../build/lib.*)" "$(PYTHON)" run_tests.py
+	}
+	python_execute_function -s testing
+}
+
+src_install() {
+	distutils_src_install
+
+	dodir "/usr/share/doc/${PF}"
+	cp -r Doc/* "${D}/usr/share/doc/${PF}/" || \
+			die "Failed to install documentation."
+	dodir "/usr/share/${PN}"
+	rm -f Tests/*.pyc || \
+			die "Failed to remove precompiled test files."
+	cp -r --preserve=mode Scripts Tests "${D}/usr/share/${PN}/" || \
+			die "Failed to install shared files."
+}