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authorJustin Lecher <jlec@gentoo.org>2013-04-26 10:06:04 +0000
committerJustin Lecher <jlec@gentoo.org>2013-04-26 10:06:04 +0000
commit30d6c045534679c65690863b2056f3dfab13105f (patch)
tree6d4df941dd913ed9790a729d279784503ad41d2b /sci-biology
parentVersion bump, respect LINGUAS (diff)
downloadhistorical-30d6c045534679c65690863b2056f3dfab13105f.tar.gz
historical-30d6c045534679c65690863b2056f3dfab13105f.tar.bz2
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sci-biology/clustal-omega: Version BUmp
Package-Manager: portage-2.2.0_alpha173/cvs/Linux x86_64 Manifest-Sign-Key: 0x8009D6F070EB7916
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/clustal-omega/ChangeLog7
-rw-r--r--sci-biology/clustal-omega/Manifest14
-rw-r--r--sci-biology/clustal-omega/clustal-omega-1.1.0.ebuild30
3 files changed, 44 insertions, 7 deletions
diff --git a/sci-biology/clustal-omega/ChangeLog b/sci-biology/clustal-omega/ChangeLog
index fa3d7b7733e5..168aee238b34 100644
--- a/sci-biology/clustal-omega/ChangeLog
+++ b/sci-biology/clustal-omega/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/clustal-omega
# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustal-omega/ChangeLog,v 1.2 2013/03/11 14:54:55 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustal-omega/ChangeLog,v 1.3 2013/04/26 10:06:03 jlec Exp $
+
+*clustal-omega-1.1.0 (26 Apr 2013)
+
+ 26 Apr 2013; Justin Lecher <jlec@gentoo.org> +clustal-omega-1.1.0.ebuild:
+ Version BUmp
11 Mar 2013; Justin Lecher <jlec@gentoo.org> metadata.xml:
Drop Andrey as maintainer so that bugs get assigned to sci-biology directly
diff --git a/sci-biology/clustal-omega/Manifest b/sci-biology/clustal-omega/Manifest
index 4dbe3cb6cfc1..d5f926eb1639 100644
--- a/sci-biology/clustal-omega/Manifest
+++ b/sci-biology/clustal-omega/Manifest
@@ -1,14 +1,16 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA256
+Hash: SHA512
-DIST clustal-omega-1.0.3.tar.gz 1146748 SHA256 b46821ed10439b7816f343e40e891ddae9b9ba0ee56f042037f3f6eabfa9b84c
+DIST clustal-omega-1.0.3.tar.gz 1146748 SHA256 b46821ed10439b7816f343e40e891ddae9b9ba0ee56f042037f3f6eabfa9b84c SHA512 7a32d58646597f266a58641dbba139d8d4308e4ecd1aac629f56915fde98b60147532665452b0f21647f194f2ee1e7a3c78a578f508b4ab1b41ba26bd7a4247b WHIRLPOOL 7c85aae2a71c4c4e150ada5870f89861d0a3de2d3593a5559024c0a74c230eaf686753dea6c686c4c340b61936d5667dc6fcbde86b7459b20897e07412740b50
+DIST clustal-omega-1.1.0.tar.gz 1149950 SHA256 6c2829a14037588b9e495dbe34b383bc4810809b82b745bad01692af7ee912fa SHA512 76b30fbb0a13a4d4fb91004d6c522f7fa09f9b3461e43255df05d1c72af5de049ff42cd28797a8f01fb8f5671a7f20a283ef61aac73650c8b5f5204d74dca910 WHIRLPOOL 0b7dcdbe05cc23ee3e2459a801a15e50668dab29581a9e07780c4de14ae1614103deeaef26a5c0eb38923c8a23435066fc6de9ec5dc43765bca7d3104253a6f0
EBUILD clustal-omega-1.0.3.ebuild 503 SHA256 e51e888558e1aff4e831bc59dc56458aa5390aa7937ddc4350921052e12697c5 SHA512 337157e4a60eb23f915854b153b34d3f8d4b6042ba0833e2db3e1fceba9061d9fc61144f753d9248656de1f4f7692e29b6deabaa26c29de9f23bd62d76fbf929 WHIRLPOOL 4a1fd413d480524d5ec29a5b986c75c36561cb444a8eea7a76404dfd9999e3af8b6a147124c584705dfc72cf2906ecb2a6db6a30d7d54cd55065f06569761890
-MISC ChangeLog 530 SHA256 a6581f487b3e9b45646e5f88c923b4683a388e861487b5d8b8ef42a5853aebfd SHA512 2ded03af8519a19a3f878b0534fb142f63e931f9ba477ca80c11e15368560899f1d2252f8efb696139f5b3308565bef3406858cf619a34432cc9a93e80c75dee WHIRLPOOL 453cb8068004dcd8a3b9666852564ed6d29c40a5ff3c18286f2bb96f2ab6d6fcc9cd60bbcbf8ed6af0ceaaf8b672f9c5a541953ee13257d9c82b28d9f9485925
+EBUILD clustal-omega-1.1.0.ebuild 680 SHA256 fa1a8502e10d07282635baf5f2f9b5bec308fa794240a610d9ecd11f3a36c50e SHA512 36b8e86a2ba9c612520a841d38c8de8d690cdb1b10dd75d6caf4f188fbd0e054580347e903e768c9936886ba01d60551a2ad38644398a33cb7c31462dd2437cb WHIRLPOOL 5052090752de175b379eb54008f8dbf885ec2ab67b9cabc09665388c981835223d7baa19e848e1d190910940b72ebb3a55cf6b86790eaf4f00502acb1b7fee42
+MISC ChangeLog 658 SHA256 c4418f8a1add6779f4ae3c381c8ee5ebbdff4b03b59a3761ab5701e9e1e827a2 SHA512 960312e3e920d8ef5166df05ffe4ea52f3cc822f69669ebba440251c0cca4f01d47cb71f5cde19420c4a224b05ea8d092cd65ce0504d15f0b81f0f500d1cc8ef WHIRLPOOL 34dbfefbdac93a9fc4acba5950bd2d4fe114b4ba6a9ab6e59977b49fd53c4f349df12644b8df1ec5762de479947b7674b417a5284b0796880cb2aba52b1400fa
MISC metadata.xml 166 SHA256 29b228f683c71345323d841414e410c929a320f34536eb30910498728260c8ac SHA512 51c5345bb1c4466b73e2feac8895c64fc119365e7f2c156702f4c93664d3aba028b3da9daaabf24f61a88220345fca7806771a252e8ae906cac5dec97862c7e0 WHIRLPOOL 211bf955d94fc1d93b12388a2c597a8d440fb5d78f84d59b2549569537098c3525b1fbab707441d62fabe20edcac2fd9ebe09c5d9870f1c9558d7ee90d5db5b3
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Version: GnuPG v2.0.19 (GNU/Linux)
-iEYEAREIAAYFAlE98EAACgkQgAnW8HDreRafZwCfU4wl/HIjlnAQd5XRpN1vNARf
-llEAoI0LSPVCTldmmRPN+w5Azpf69USo
-=l/Ds
+iEYEAREKAAYFAlF6UYwACgkQgAnW8HDreRa9cQCgmiMvNPdWduNyv9SfjIes+8Uv
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diff --git a/sci-biology/clustal-omega/clustal-omega-1.1.0.ebuild b/sci-biology/clustal-omega/clustal-omega-1.1.0.ebuild
new file mode 100644
index 000000000000..baff3d570e0d
--- /dev/null
+++ b/sci-biology/clustal-omega/clustal-omega-1.1.0.ebuild
@@ -0,0 +1,30 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustal-omega/clustal-omega-1.1.0.ebuild,v 1.1 2013/04/26 10:06:03 jlec Exp $
+
+EAPI=5
+
+AUTOTOOLS_AUTORECONF=true
+
+inherit autotools-utils
+
+DESCRIPTION="Scalable multiple alignment of protein sequences"
+HOMEPAGE="http://www.clustal.org/omega/"
+SRC_URI="http://www.clustal.org/omega/${P}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND="dev-libs/argtable"
+RDEPEND="${DEPEND}"
+
+AUTOTOOLS_IN_SOURCE_BUILD=1
+
+src_prepare() {
+ sed \
+ -e "s:-O3::g" \
+ -i configure.ac || die
+ autotools-utils_src_prepare
+}