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authorJeremy Olexa <darkside@gentoo.org>2009-09-06 05:00:38 +0000
committerJeremy Olexa <darkside@gentoo.org>2009-09-06 05:00:38 +0000
commit245f8c404521aa24c4b1599e68bf8eea22f398a2 (patch)
treeb066f6a6368141854fdafa6d07729258cfde801c /sci-biology
parentamd64 stable, bug 283678. As requested, compile tested only due to complexity (diff)
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amd64 stable, bug 282107
Package-Manager: portage-2.1.6.13/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/bowtie/Manifest4
-rw-r--r--sci-biology/clustalw/Manifest4
-rw-r--r--sci-biology/glimmerhmm/ChangeLog5
-rw-r--r--sci-biology/glimmerhmm/glimmerhmm-3.0.1.ebuild4
-rw-r--r--sci-biology/infernal/Manifest4
5 files changed, 12 insertions, 9 deletions
diff --git a/sci-biology/bowtie/Manifest b/sci-biology/bowtie/Manifest
index 04ab030a346c..f50a3b1d97ba 100644
--- a/sci-biology/bowtie/Manifest
+++ b/sci-biology/bowtie/Manifest
@@ -2,7 +2,7 @@ DIST bowtie-0.10.0-src.zip 10255341 RMD160 33218e30da716cf358ca0df68e5dfedb16948
DIST bowtie-0.10.1-src.zip 10258866 RMD160 99628de52fda58ee358f1ac629634210be24cf3e SHA1 f509f442d824a7b2b0650f29d2b3625aea1a1466 SHA256 71a64c08eee4147f670d52a8e9f61d28d9c67fa595ece93d55d9524e15fed809
DIST bowtie-0.9.9.2-src.zip 10234128 RMD160 ad728d8f23742ece2d9d2bfe708b76cdcabf32b0 SHA1 f1d2afd5391d08f7481fe0eb5f38e9d3878e9598 SHA256 c002647a0412ed736cfbd879b3a3194286d2973c6e3e32b2f7d749bebbd96228
EBUILD bowtie-0.10.0.ebuild 861 RMD160 cd67e587879e0f019d5b3a74b15c365aebc4eaed SHA1 bf86360991819d2bebbe89d0bbefc01b3e13a30d SHA256 1ccb7b06831dd21d88325ca4d527d5e0848e6453130db4cbdeced5db00c3bfe9
-EBUILD bowtie-0.10.1.ebuild 861 RMD160 7b0d689a3388463e56b345060aa38c8bf489d218 SHA1 b637c90c0456d644c2e267d5255c0d4d7d720ed7 SHA256 90a0c3fa0cc001d23ee497b8b5cbd1b2c69569f2c87511774308aad016a2ee45
+EBUILD bowtie-0.10.1.ebuild 862 RMD160 eb433669a8e77e17ae13fbf69abe61399cdee631 SHA1 b64830c9b5826efed9300b8aa6328a06cdc559c2 SHA256 83b4877816fef8c59e28e9ad76b520f172431dbbc242af39f711cee056011f2d
EBUILD bowtie-0.9.9.2.ebuild 803 RMD160 02b3cc8d5fc424b1ab859ca3b5556f59c09cbfa4 SHA1 5a910d97e8112e54ed8bb52346f3834498c22b7d SHA256 837f262ce03aeda12bf4a63d833fde9ce2e43eb633c9fd58ab3835c38467690b
-MISC ChangeLog 961 RMD160 c2b6ee8352f34d5dc37a91ecc26b7f4285860001 SHA1 d954a6e2bf2bca7706f7a1ff4ebec65f251ce56f SHA256 34e81bc1a18a8e9798489e3460c0a9fe3104d069f9ed12990017ad1b21357475
+MISC ChangeLog 1063 RMD160 3759a9cabff11ab4543cd9ecf21fc57196dd1671 SHA1 421c3bce059348c95f74a213f28ebb0f5458ad52 SHA256 29f1c7858192f53f322e5dbd657cbfe4533ee104e2756c2e3b2ce6a890ab7df4
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
diff --git a/sci-biology/clustalw/Manifest b/sci-biology/clustalw/Manifest
index 8782988e8a25..0e54a08a40f4 100644
--- a/sci-biology/clustalw/Manifest
+++ b/sci-biology/clustalw/Manifest
@@ -3,6 +3,6 @@ DIST clustalw-2.0.11.tar.gz 325936 RMD160 ea65bcda9ca1006ab498cd967ae82cc1409332
DIST clustalw1.83.UNIX.tar.gz 166863 RMD160 20c0ec7739be6747ae08220e5abf2bae412f039e SHA1 801ce911749171471b7964a1cff93c53c876c282 SHA256 8b757e02ae95ac0a0dd37db640497aa90f7a13a11784ce2a17f41b64e3059c60
EBUILD clustalw-1.83-r2.ebuild 1030 RMD160 af7d00ff23a5e449cae83c30c3b10b4eb40d5725 SHA1 395eaf26bf20191e4c7c48638656fe4bd26ae438 SHA256 e70cc91d973bcf2ff70ccb39c2cdee36f804edfbec9ed89e8fb128bcd90d14c9
EBUILD clustalw-1.83-r3.ebuild 965 RMD160 77e30c7efa37f2e4fce05dd18939de8e9f3b8f98 SHA1 0d4d736660df3362259f1041bcf754d9e158eb06 SHA256 340538bf07b91bc115a05cd1196a3e873be72b703aef9a99ee29d28fd7c829b7
-EBUILD clustalw-2.0.11.ebuild 528 RMD160 2c2c6b6166ef72cb6b7f69454ed8e949d84255b8 SHA1 c5e223dc30a3cad0be35743a4f1094e4908c8a5b SHA256 a4f06cc608a8185e0e01a41535585e2086279f6eb8147a496da555b158c35192
-MISC ChangeLog 3775 RMD160 b3ac773b925e25b1b9cc4d207048e4c47f782732 SHA1 854d983640434a3ed08f8b04b49356c49ddd982f SHA256 ccc122e78dedb83d28a98ec2c1cd211067da6e927c9f5504dc1da68503516059
+EBUILD clustalw-2.0.11.ebuild 529 RMD160 f30c1348ea43fe1f0b12c9bf8089277bd4d07f42 SHA1 e79603f4e640a0d5708211d1bad7b7ac2ec01407 SHA256 749be03b5d988421eecd39f5f138ae6fc6ad16413cdec8600cee759f54055562
+MISC ChangeLog 3879 RMD160 851e33312bfa05aa3ece9dba4e6e03d55bf36147 SHA1 7ad5f45cab9dfc57c841310425a9347d2f9d48f8 SHA256 036816d3f6e27dfa7be36b9e8ff907d99160cc56ec4a1b5b31297ac147c55352
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
diff --git a/sci-biology/glimmerhmm/ChangeLog b/sci-biology/glimmerhmm/ChangeLog
index 4cef94853e51..c3d3fea9c7d2 100644
--- a/sci-biology/glimmerhmm/ChangeLog
+++ b/sci-biology/glimmerhmm/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/glimmerhmm
# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/glimmerhmm/ChangeLog,v 1.2 2009/03/19 15:12:35 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/glimmerhmm/ChangeLog,v 1.3 2009/09/06 05:00:38 darkside Exp $
+
+ 06 Sep 2009; Jeremy Olexa <darkside@gentoo.org> glimmerhmm-3.0.1.ebuild:
+ amd64 stable, bug 282107
19 Mar 2009; Andrey Kislyuk <weaver@gentoo.org> ChangeLog:
QA, keyword ~amd64
diff --git a/sci-biology/glimmerhmm/glimmerhmm-3.0.1.ebuild b/sci-biology/glimmerhmm/glimmerhmm-3.0.1.ebuild
index a0a78a26e487..14fbef8e6736 100644
--- a/sci-biology/glimmerhmm/glimmerhmm-3.0.1.ebuild
+++ b/sci-biology/glimmerhmm/glimmerhmm-3.0.1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/glimmerhmm/glimmerhmm-3.0.1.ebuild,v 1.3 2009/03/19 15:12:35 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/glimmerhmm/glimmerhmm-3.0.1.ebuild,v 1.4 2009/09/06 05:00:38 darkside Exp $
inherit toolchain-funcs
@@ -13,7 +13,7 @@ SRC_URI="ftp://ftp.cbcb.umd.edu/pub/software/glimmerhmm/${MY_P}-${PV}.tar.gz"
LICENSE="Artistic"
SLOT="0"
IUSE=""
-KEYWORDS="~amd64 ~x86"
+KEYWORDS="amd64 ~x86"
DEPEND=""
RDEPEND=""
diff --git a/sci-biology/infernal/Manifest b/sci-biology/infernal/Manifest
index 20e01c631dfa..fc1dbcb9a512 100644
--- a/sci-biology/infernal/Manifest
+++ b/sci-biology/infernal/Manifest
@@ -1,4 +1,4 @@
DIST infernal-1.0.tar.gz 15032429 RMD160 3438e28ed0cd895a34d6eacc230c34f58b3f95ce SHA1 19c16b32c11fdcfd21a7ff7c5c127c0f9ead08fd SHA256 099d322c1aa1434f9a37379375f24e02cf4eceb102b12690ba1c65958a73999f
-EBUILD infernal-1.0.ebuild 817 RMD160 1a60a1a27bf66772e8b4d702c03670d34cf95a4f SHA1 5af02fcac039911df1d5b96a82ed2762678cbe0d SHA256 05d45e97829a5f03699e38f33dca8d95a0d998f0740c9257fada4332e276d9dc
-MISC ChangeLog 567 RMD160 42595b334a49e73b57dcdda89eb00ff36c5adcab SHA1 0759ea5b9335592512d96a82b163931cf26dcd12 SHA256 a20d6995b5b07450296db15729286573cc00fb22a2c54aaa439b253efd85e54c
+EBUILD infernal-1.0.ebuild 818 RMD160 b53952645e684c34ba8b72fc80531e63ee82020f SHA1 5d718898232e2c31e47340d52d31065372242df9 SHA256 edb0277ee38c72acb430ff10ddc27e2dbaf681075c386ee83c2590135814fa84
+MISC ChangeLog 668 RMD160 a42a3421a77994330a013a8f0c9f45e4065730d4 SHA1 a6804fb312240d3d14a974978c23173b1d157c3f SHA256 407cad2b874ecb47d837f516e0f96d7fadf8d1f75c052653d75524d3291906e4
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110