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authorOlivier Fisette <ribosome@gentoo.org>2005-10-04 00:13:13 +0000
committerOlivier Fisette <ribosome@gentoo.org>2005-10-04 00:13:13 +0000
commita4337013d75a324818721f89f6d7ab4f8e2a0d07 (patch)
tree63be987fd445399b89737b6cc94c8b98cb77c5df /sci-biology/emboss
parentRemoving obsolete embassy packages (diff)
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Removing obsolete emboss packages
Package-Manager: portage-2.0.51.22-r2
Diffstat (limited to 'sci-biology/emboss')
-rw-r--r--sci-biology/emboss/ChangeLog5
-rw-r--r--sci-biology/emboss/emboss-2.10.0.ebuild60
-rw-r--r--sci-biology/emboss/files/digest-emboss-2.10.01
3 files changed, 4 insertions, 62 deletions
diff --git a/sci-biology/emboss/ChangeLog b/sci-biology/emboss/ChangeLog
index 78264b88bb47..aaf5b94ef8c8 100644
--- a/sci-biology/emboss/ChangeLog
+++ b/sci-biology/emboss/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/emboss
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.21 2005/10/03 21:57:27 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.22 2005/10/04 00:13:13 ribosome Exp $
+
+ 04 Oct 2005; Olivier Fisette <ribosome@gentoo.org> -emboss-2.10.0.ebuild:
+ Removed obsolete version.
03 Oct 2005; Olivier Fisette <ribosome@gentoo.org> emboss-3.0.0.ebuild:
Stable on ppc-macos (with j4rg0n's permission, bug #102420).
diff --git a/sci-biology/emboss/emboss-2.10.0.ebuild b/sci-biology/emboss/emboss-2.10.0.ebuild
deleted file mode 100644
index b4af1b89849f..000000000000
--- a/sci-biology/emboss/emboss-2.10.0.ebuild
+++ /dev/null
@@ -1,60 +0,0 @@
-# Copyright 1999-2005 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-2.10.0.ebuild,v 1.7 2005/08/13 02:55:35 ribosome Exp $
-
-DESCRIPTION="The European Molecular Biology Open Software Suite - A sequence analysis package"
-HOMEPAGE="http://emboss.sourceforge.net/"
-SRC_URI="ftp://ftp.uk.embnet.org/pub/EMBOSS/EMBOSS-${PV}.tar.gz"
-LICENSE="GPL-2 LGPL-2"
-
-SLOT="0"
-KEYWORDS="ppc ppc-macos ppc64 x86"
-IUSE="X png minimal"
-
-DEPEND="X? ( virtual/x11 )
- png? (
- sys-libs/zlib
- media-libs/libpng
- >=media-libs/gd-1.8
- )
- !minimal? (
- sci-biology/primer3
- sci-biology/clustalw
- )"
-
-PDEPEND="!minimal? (
- sci-biology/aaindex
- sci-biology/cutg
- sci-biology/prints
- <=sci-biology/prosite-19.6
- sci-biology/rebase
- sci-biology/transfac
- )"
-
-S=${WORKDIR}/EMBOSS-${PV}
-
-src_compile() {
- EXTRA_CONF="--includedir=${D}/usr/include/emboss"
- ! use X && EXTRA_CONF="${EXTRA_CONF} --without-x"
- ! use png && EXTRA_CONF="${EXTRA_CONF} --without-pngdriver"
-
- econf ${EXTRA_CONF} || die
- # Do not install the JEMBOSS component (the --without-java configure option
- # does not work). JEMBOSS will be available as a separate package.
- sed -i -e 's/SUBDIRS = plplot ajax nucleus emboss test doc jemboss/SUBDIRS = plplot ajax nucleus emboss test doc/' Makefile || die
- emake || die
-}
-
-src_install() {
- einstall || die
- dodoc AUTHORS ChangeLog FAQ NEWS README THANKS
-
- # Install env file for setting libplplot and acd files path.
- insinto /etc/env.d
- newins ${FILESDIR}/22emboss-r1 22emboss
-
- # Symlink preinstalled docs to /usr/share/doc.
- dosym /usr/share/EMBOSS/doc/manuals /usr/share/doc/${PF}/manuals
- dosym /usr/share/EMBOSS/doc/programs /usr/share/doc/${PF}/programs
- dosym /usr/share/EMBOSS/doc/tutorials /usr/share/doc/${PF}/tutorials
-}
diff --git a/sci-biology/emboss/files/digest-emboss-2.10.0 b/sci-biology/emboss/files/digest-emboss-2.10.0
deleted file mode 100644
index 7b973e38a9d7..000000000000
--- a/sci-biology/emboss/files/digest-emboss-2.10.0
+++ /dev/null
@@ -1 +0,0 @@
-MD5 4a48388ced7021a8ffece5166c40a364 EMBOSS-2.10.0.tar.gz 16262124