Moving to sci-biology/seaview

6 files changed, 0 insertions, 87 deletions

diff --git a/app-sci/seaview/ChangeLog b/app-sci/seaview/ChangeLog
deleted file mode 100644
index 384b303b78ce..000000000000
--- a/app-sci/seaview/ChangeLog
+++ /dev/null
@@ -1,29 +0,0 @@
-# ChangeLog for app-sci/seaview
-# Copyright 2000-2004 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/seaview/ChangeLog,v 1.6 2004/11/22 19:38:18 sekretarz Exp $
-
-  22 Nov 2004; Karol Wojtaszek <sekretarz@gentoo.org> seaview-1-r1.ebuild:
-  Added to ~amd64, bug #72078
-
-  31 Oct 2004; Olivier Fisette <ribosome@gentoo.org> seaview-1-r1.ebuild:
-  Added to x86.
-
-*seaview-1 (24 Jun 2004)
-
-  24 Jun 2004; Olivier Fisette <ribosome@gentoo.org>
-  seaview-1-r1.ebuild, metedata.xml:
-  Added app-sci/clustalw as a mandatory dependency.
-  Set maintainer (ribosome).
-
-*seaview-1 (24 Jun 2004)
-
-  24 Jun 2004; David Holm <dholm@gentoo.org> seaview-1.ebuild:
-  Added to ~ppc.
-
-*seaview-1 (23 Jun 2004)
-
-  23 Jun 2004; Olivier Fisette <ribosome@gentoo.org>
-  seaview-1.ebuild, metadata.xml, files/29seaview :
-  Initial import.  Ebuild submitted by Olivier Fisette <ribosome@gentoo.org>.
-  Reference: Gentoo Bugzilla, bug #54055
-
diff --git a/app-sci/seaview/Manifest b/app-sci/seaview/Manifest
deleted file mode 100644
index 0dad7588f900..000000000000
--- a/app-sci/seaview/Manifest
+++ /dev/null
@@ -1,5 +0,0 @@
-MD5 8d176cb069d21ce4a4cac1fc2fb727f9 ChangeLog 959
-MD5 1a46ccdd45f25abe962e4f46d7c7ee7d seaview-1-r1.ebuild 916
-MD5 7b87a6c33de5295e356b67218bd4fba9 metadata.xml 614
-MD5 81acca7fe3c919d7be4ef27307d9ce7d files/29seaview 26
-MD5 ee3d2374f6b28744f1b282577c0dcb38 files/digest-seaview-1-r1 56
diff --git a/app-sci/seaview/files/29seaview b/app-sci/seaview/files/29seaview
deleted file mode 100644
index 64f2831dcaee..000000000000
--- a/app-sci/seaview/files/29seaview
+++ /dev/null
@@ -1 +0,0 @@
-PATH="/usr/share/seaview"
diff --git a/app-sci/seaview/files/digest-seaview-1-r1 b/app-sci/seaview/files/digest-seaview-1-r1
deleted file mode 100644
index 1b50df5638af..000000000000
--- a/app-sci/seaview/files/digest-seaview-1-r1
+++ /dev/null
@@ -1 +0,0 @@
-MD5 48db16486992fed35dad053fed0734e0 seaview.tar 560640
diff --git a/app-sci/seaview/metadata.xml b/app-sci/seaview/metadata.xml
deleted file mode 100644
index 29c4ec7801fc..000000000000
--- a/app-sci/seaview/metadata.xml
+++ /dev/null
@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<herd>sci</herd>
-	<maintainer>
-		<email>ribosome@gentoo.org</email>
-		<name>Olivier Fisette</name>
-	</maintainer>
-	<longdescription>
-		SeaView is a graphical multiple sequence alignment editor developped by
-		Manolo Gouy. SeaView is able to read and write various alignment
-		formats (NEXUS, MSF, CLUSTAL, FASTA, PHYLIP, MASE). It allows to
-		manually edit the alignment, and also to run DOT-PLOT or CLUSTALW
-		programs to locally improve the alignment.
-	</longdescription>
-</pkgmetadata>
diff --git a/app-sci/seaview/seaview-1-r1.ebuild b/app-sci/seaview/seaview-1-r1.ebuild
deleted file mode 100644
index 203cd5d17921..000000000000
--- a/app-sci/seaview/seaview-1-r1.ebuild
+++ /dev/null
@@ -1,35 +0,0 @@
-# Copyright 1999-2004 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/seaview/seaview-1-r1.ebuild,v 1.5 2004/12/23 18:58:39 ribosome Exp $
-
-DESCRIPTION="A graphical multiple sequence alignment editor"
-HOMEPAGE="http://pbil.univ-lyon1.fr/software/${PN}.html"
-SRC_URI="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/${PN}/${PN}.tar"
-LICENSE="public-domain"
-
-SLOT="0"
-KEYWORDS="x86 ~ppc ~amd64"
-IUSE=""
-
-DEPEND="x11-libs/fltk
-	sci-biology/clustalw"
-
-S=${WORKDIR}
-
-src_compile() {
-	# Corrects location of libfltk.
-	CFLAGS="${CFLAGS} -c -I/usr/include/fltk-1.1"
-	sed -ie 's:-L$(FLTK)/lib:-L/usr/lib/fltk-1.1:' Makefile
-
-	emake -e || die
-}
-
-src_install() {
-	dobin seaview seaview_align.sh
-	insinto /usr/share/${PN}
-	doins protein.mase seaview.help
-
-	# Sets the path for the package's help file.
-	insinto /etc/env.d
-	doins ${FILESDIR}/29seaview
-}