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authorDonnie Berkholz <dberkholz@gentoo.org>2006-07-07 05:40:26 +0000
committerDonnie Berkholz <dberkholz@gentoo.org>2006-07-07 05:40:26 +0000
commit9423b550027f112bbab8aea71f751259e1d90ede (patch)
tree7b4b957c9871bab945169001613b37b0e75d212e
parent+# Added back mask for dev-util/netbeans-4 until tomcat is fixed up (diff)
downloadhistorical-9423b550027f112bbab8aea71f751259e1d90ede.tar.gz
historical-9423b550027f112bbab8aea71f751259e1d90ede.tar.bz2
historical-9423b550027f112bbab8aea71f751259e1d90ede.zip
Update to my new email address.
Package-Manager: portage-2.1.1_pre2-r4
-rw-r--r--sci-chemistry/apbs/ChangeLog7
-rw-r--r--sci-chemistry/caver/ChangeLog9
-rw-r--r--sci-chemistry/caver/metadata.xml2
-rw-r--r--sci-chemistry/ccp4/ChangeLog7
-rw-r--r--sci-chemistry/ccp4/metadata.xml2
-rw-r--r--sci-chemistry/cns/ChangeLog7
-rw-r--r--sci-chemistry/cns/metadata.xml2
-rw-r--r--sci-chemistry/coot/ChangeLog9
-rw-r--r--sci-chemistry/coot/metadata.xml2
-rw-r--r--sci-chemistry/easychem/ChangeLog7
-rw-r--r--sci-chemistry/eden/ChangeLog9
-rw-r--r--sci-chemistry/eden/metadata.xml2
-rw-r--r--sci-chemistry/gopenmol/ChangeLog9
-rw-r--r--sci-chemistry/gopenmol/files/digest-gopenmol-3.002
-rw-r--r--sci-chemistry/gopenmol/metadata.xml2
-rw-r--r--sci-chemistry/gromacs/ChangeLog23
-rw-r--r--sci-chemistry/gromacs/metadata.xml2
-rw-r--r--sci-chemistry/maid/ChangeLog17
-rw-r--r--sci-chemistry/maid/metadata.xml2
-rw-r--r--sci-chemistry/maxit/ChangeLog9
-rw-r--r--sci-chemistry/maxit/metadata.xml2
-rw-r--r--sci-chemistry/mead/ChangeLog9
-rw-r--r--sci-chemistry/mead/metadata.xml2
-rw-r--r--sci-chemistry/molden/ChangeLog35
-rw-r--r--sci-chemistry/molden/metadata.xml2
-rw-r--r--sci-chemistry/moldy/ChangeLog15
-rw-r--r--sci-chemistry/moldy/metadata.xml2
-rw-r--r--sci-chemistry/molmol/ChangeLog17
-rw-r--r--sci-chemistry/molmol/metadata.xml2
-rw-r--r--sci-chemistry/molscript/ChangeLog9
-rw-r--r--sci-chemistry/molscript/metadata.xml2
-rw-r--r--sci-chemistry/mopac7/ChangeLog17
-rw-r--r--sci-chemistry/mopac7/metadata.xml2
-rw-r--r--sci-chemistry/ortep3/ChangeLog9
-rw-r--r--sci-chemistry/ortep3/metadata.xml2
-rw-r--r--sci-chemistry/pdb-extract/ChangeLog11
-rw-r--r--sci-chemistry/pdb-extract/metadata.xml2
-rw-r--r--sci-chemistry/platon/ChangeLog11
-rw-r--r--sci-chemistry/platon/metadata.xml2
-rw-r--r--sci-chemistry/probe/ChangeLog7
-rw-r--r--sci-chemistry/probe/metadata.xml2
-rw-r--r--sci-chemistry/psi/ChangeLog7
-rw-r--r--sci-chemistry/psi/metadata.xml2
-rw-r--r--sci-chemistry/reduce/ChangeLog7
-rw-r--r--sci-chemistry/reduce/metadata.xml2
-rw-r--r--sci-chemistry/shelx/ChangeLog9
-rw-r--r--sci-chemistry/shelx/metadata.xml2
-rw-r--r--sci-chemistry/sparky/ChangeLog13
-rw-r--r--sci-chemistry/sparky/metadata.xml2
-rw-r--r--sci-chemistry/tinker/ChangeLog13
-rw-r--r--sci-chemistry/tinker/metadata.xml2
-rw-r--r--sci-chemistry/validation/ChangeLog15
-rw-r--r--sci-chemistry/validation/metadata.xml2
-rw-r--r--sci-chemistry/viewmol/ChangeLog11
-rw-r--r--sci-chemistry/viewmol/metadata.xml2
-rw-r--r--sci-chemistry/webmo/ChangeLog21
-rw-r--r--sci-chemistry/webmo/metadata.xml2
57 files changed, 247 insertions, 158 deletions
diff --git a/sci-chemistry/apbs/ChangeLog b/sci-chemistry/apbs/ChangeLog
index 2cd215db378c..25b68def9759 100644
--- a/sci-chemistry/apbs/ChangeLog
+++ b/sci-chemistry/apbs/ChangeLog
@@ -1,8 +1,11 @@
# ChangeLog for sci-chemistry/apbs
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.6 2006/05/31 07:41:09 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.7 2006/07/07 05:28:48 dberkholz Exp $
- 31 May 2006; Donnie Berkholz <spyderous@gentoo.org>; apbs-0.4.0.ebuild:
+ 07 Jul 2006; Donnie Berkholz <spyderous@gentoo.org>; ChangeLog:
+ Update to my new email address.
+
+ 31 May 2006; Donnie Berkholz <dberkholz@gentoo.org>; apbs-0.4.0.ebuild:
Fix crackrock SRC_URI, reported by Brian Harring.
23 May 2006; Markus Dittrich <markusle@gentoo.org>
diff --git a/sci-chemistry/caver/ChangeLog b/sci-chemistry/caver/ChangeLog
index ac3376e5cbd3..270f8ec500c9 100644
--- a/sci-chemistry/caver/ChangeLog
+++ b/sci-chemistry/caver/ChangeLog
@@ -1,16 +1,19 @@
# ChangeLog for sci-chemistry/caver
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/caver/ChangeLog,v 1.2 2006/05/14 06:12:45 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/caver/ChangeLog,v 1.3 2006/07/07 05:29:17 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <spyderous@gentoo.org>; metadata.xml:
+ Update to my new email address.
*caver-0.99.2 (14 May 2006)
- 14 May 2006; Donnie Berkholz <spyderous@gentoo.org>; +caver-0.99.2.ebuild:
+ 14 May 2006; Donnie Berkholz <dberkholz@gentoo.org>; +caver-0.99.2.ebuild:
Bump. This version does a much better job of finding stuff, and the pymol
plugin's a lot more capable.
*caver-0.99.1 (20 Dec 2005)
- 20 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; +metadata.xml,
+ 20 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; +metadata.xml,
+caver-0.99.1.ebuild:
New package providing rapid, accurate and fully automated calculation of
pathways leading from buried cavities to outside solvent in static and
diff --git a/sci-chemistry/caver/metadata.xml b/sci-chemistry/caver/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/caver/metadata.xml
+++ b/sci-chemistry/caver/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/ccp4/ChangeLog b/sci-chemistry/ccp4/ChangeLog
index d379184f709c..6eb57f4274f1 100644
--- a/sci-chemistry/ccp4/ChangeLog
+++ b/sci-chemistry/ccp4/ChangeLog
@@ -1,10 +1,13 @@
# ChangeLog for sci-chemistry/ccp4
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/ccp4/ChangeLog,v 1.1 2006/06/16 20:46:02 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/ccp4/ChangeLog,v 1.2 2006/07/07 05:30:22 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <spyderous@gentoo.org>; metadata.xml:
+ Update to my new email address.
*ccp4-6.0.1 (16 Jun 2006)
- 16 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 16 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>;
+files/6.0.1-dont-make-dirs-in-configure.patch,
+files/6.0.1-ppc-double-define-gerror.patch,
+files/ccp4i-default-to-firefox.patch,
diff --git a/sci-chemistry/ccp4/metadata.xml b/sci-chemistry/ccp4/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/ccp4/metadata.xml
+++ b/sci-chemistry/ccp4/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/cns/ChangeLog b/sci-chemistry/cns/ChangeLog
index e551299ef8d1..484d7cdfcc1a 100644
--- a/sci-chemistry/cns/ChangeLog
+++ b/sci-chemistry/cns/ChangeLog
@@ -1,10 +1,13 @@
# ChangeLog for sci-chemistry/cns
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/cns/ChangeLog,v 1.1 2006/06/10 07:28:49 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/cns/ChangeLog,v 1.2 2006/07/07 05:30:48 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <spyderous@gentoo.org>; metadata.xml:
+ Update to my new email address.
*cns-1.1 (10 Jun 2006)
- 10 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 10 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>;
+files/1.1-time-length-10.patch, +metadata.xml, +cns-1.1.ebuild:
Add CNS, an important package in X-ray crystallography and nuclear magnetic
resonance (NMR).
diff --git a/sci-chemistry/cns/metadata.xml b/sci-chemistry/cns/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/cns/metadata.xml
+++ b/sci-chemistry/cns/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/coot/ChangeLog b/sci-chemistry/coot/ChangeLog
index 6cfac84cb708..2fba996834ae 100644
--- a/sci-chemistry/coot/ChangeLog
+++ b/sci-chemistry/coot/ChangeLog
@@ -1,14 +1,17 @@
# ChangeLog for sci-chemistry/coot
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/ChangeLog,v 1.2 2006/06/28 08:24:00 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/ChangeLog,v 1.3 2006/07/07 05:31:23 dberkholz Exp $
- 28 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 07 Jul 2006; Donnie Berkholz <spyderous@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 28 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>;
coot-0.1.2_pre1.ebuild:
Add missing dep on x11-libs/gtkglext.
*coot-0.1.2_pre1 (16 Jun 2006)
- 16 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>; +metadata.xml,
+ 16 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>; +metadata.xml,
+coot-0.1.2_pre1.ebuild:
Add the Crystallographic Object-Oriented Toolkit for model building,
completion and validation.
diff --git a/sci-chemistry/coot/metadata.xml b/sci-chemistry/coot/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/coot/metadata.xml
+++ b/sci-chemistry/coot/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/easychem/ChangeLog b/sci-chemistry/easychem/ChangeLog
index d3b01dd82231..bb44be7885e0 100644
--- a/sci-chemistry/easychem/ChangeLog
+++ b/sci-chemistry/easychem/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-chemistry/easychem
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/easychem/ChangeLog,v 1.8 2006/06/25 19:15:45 cryos Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/easychem/ChangeLog,v 1.9 2006/07/07 05:31:46 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <spyderous@gentoo.org>; ChangeLog:
+ Update to my new email address.
13 Apr 2006; Patrick McLean <chutzpah@gentoo.org> easychem-0.6.ebuild:
Remove amd64 keyword, this deps on media-gfx/pstoedit which deps on
@@ -14,7 +17,7 @@
26 Jul 2005; Marcus D. Hanwell <cryos@gentoo.org> easychem-0.6.ebuild:
Stable on amd64 and x86.
- 13 Jul 2005; Donnie Berkholz <spyderous@gentoo.org>; easychem-0.6.ebuild:
+ 13 Jul 2005; Donnie Berkholz <dberkholz@gentoo.org>; easychem-0.6.ebuild:
Use a little trickery to allow virtual/ghostscript instead of just
>=app-text/ghostscript-7.07.1-r2 but retain the dependency by blocking lower
versions.
diff --git a/sci-chemistry/eden/ChangeLog b/sci-chemistry/eden/ChangeLog
index fd169f9bb4c0..57c1c59dc77a 100644
--- a/sci-chemistry/eden/ChangeLog
+++ b/sci-chemistry/eden/ChangeLog
@@ -1,10 +1,13 @@
# ChangeLog for sci-chemistry/eden
-# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/eden/ChangeLog,v 1.1 2005/12/16 06:46:21 spyderous Exp $
+# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/eden/ChangeLog,v 1.2 2006/07/07 05:33:00 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*eden-5.3 (16 Dec 2005)
- 16 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 16 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/makefile-fixes.patch, +metadata.xml, +eden-5.3.ebuild:
A crystallographic real-space electron-density refinement and optimization
program.
diff --git a/sci-chemistry/eden/metadata.xml b/sci-chemistry/eden/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/eden/metadata.xml
+++ b/sci-chemistry/eden/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/gopenmol/ChangeLog b/sci-chemistry/gopenmol/ChangeLog
index 3a5f75572a71..33de5c45a69d 100644
--- a/sci-chemistry/gopenmol/ChangeLog
+++ b/sci-chemistry/gopenmol/ChangeLog
@@ -1,16 +1,19 @@
# ChangeLog for sci-chemistry/gopenmol
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gopenmol/ChangeLog,v 1.2 2006/02/21 16:58:18 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gopenmol/ChangeLog,v 1.3 2006/07/07 05:33:21 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*gopenmol-3.00-r1 (21 Feb 2006)
- 21 Feb 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 21 Feb 2006; Donnie Berkholz <dberkholz@gentoo.org>;
+gopenmol-3.00-r1.ebuild:
(#123573) Build and install utilities; fix by hodak@nemo.physics.ncsu.edu.
*gopenmol-3.00 (03 Dec 2005)
- 03 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 03 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/3.00-include-config-for-plugins.patch, +metadata.xml,
+gopenmol-3.00.ebuild:
(#53333) New molecular graphics package for visualizing and analyzing
diff --git a/sci-chemistry/gopenmol/files/digest-gopenmol-3.00 b/sci-chemistry/gopenmol/files/digest-gopenmol-3.00
index 8669525a5f7b..516dc395dd1e 100644
--- a/sci-chemistry/gopenmol/files/digest-gopenmol-3.00
+++ b/sci-chemistry/gopenmol/files/digest-gopenmol-3.00
@@ -1 +1,3 @@
MD5 4e12ee6680c093a3bf056dde1d28fea2 gopenmol-3.00-linux.tar.gz 29615195
+RMD160 8ed743925bf2c8583228fa19d8afbdc37c0af8de gopenmol-3.00-linux.tar.gz 29615195
+SHA256 314494a751f65c28d015fee854d2ee347fecbca6ccf31bb7e04db7eda6a16a23 gopenmol-3.00-linux.tar.gz 29615195
diff --git a/sci-chemistry/gopenmol/metadata.xml b/sci-chemistry/gopenmol/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/gopenmol/metadata.xml
+++ b/sci-chemistry/gopenmol/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/gromacs/ChangeLog b/sci-chemistry/gromacs/ChangeLog
index 2ae777166369..c18b1521b846 100644
--- a/sci-chemistry/gromacs/ChangeLog
+++ b/sci-chemistry/gromacs/ChangeLog
@@ -1,8 +1,11 @@
# ChangeLog for sci-chemistry/gromacs
# Copyright 2002-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/ChangeLog,v 1.8 2006/06/25 00:28:25 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/gromacs/ChangeLog,v 1.9 2006/07/07 05:33:46 dberkholz Exp $
- 25 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>; gromacs-3.2.1.ebuild,
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 25 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>; gromacs-3.2.1.ebuild,
gromacs-3.2.1-r1.ebuild, gromacs-3.3.ebuild:
(#116346) Change xml2 USE flag to xml.
@@ -11,7 +14,7 @@
*gromacs-3.3 (14 Oct 2005)
- 14 Oct 2005; Donnie Berkholz <spyderous@gentoo.org>; +gromacs-3.3.ebuild:
+ 14 Oct 2005; Donnie Berkholz <dberkholz@gentoo.org>; +gromacs-3.3.ebuild:
(#109184) Bump. Main change in ebuild is adding a check for fftw built w/
mpi if trying to build w/ mpi. One of the more interesting upstream changes
is the addition of x86-64 and ia64 assembly.
@@ -33,12 +36,12 @@
06 Jun 2004; Danny van Dyk <kugelfang@gentoo.org> gromacs-3.2.1.ebuild:
Marked stable on amd64.
- 22 Apr 2004; Donnie Berkholz <spyderous@gentoo.org>;
+ 22 Apr 2004; Donnie Berkholz <dberkholz@gentoo.org>;
-files/gromacs-3.2-all-static-fix.patch, -gromacs-3.1.4-r1.ebuild,
-gromacs-3.1.4-r2.ebuild, gromacs-3.2.1.ebuild, -gromacs-3.2.ebuild:
Mark 3.2.1 stable on x86. Remove old versions.
- 22 Apr 2004; Donnie Berkholz <spyderous@gentoo.org>;
+ 22 Apr 2004; Donnie Berkholz <dberkholz@gentoo.org>;
gromacs-3.1.4-r1.ebuild, gromacs-3.2.1.ebuild:
Add app-shells/tcsh to dependencies (#48691).
@@ -47,28 +50,28 @@
*gromacs-3.2.1 (02 Apr 2004)
- 02 Apr 2004; Donnie Berkholz <spyderous@gentoo.org>; gromacs-3.2.1.ebuild:
+ 02 Apr 2004; Donnie Berkholz <dberkholz@gentoo.org>; gromacs-3.2.1.ebuild:
Version bump, closes #44377.
*gromacs-3.2 (29 Feb 2004)
- 29 Feb 2004; Donnie Berkholz <spyderous@gentoo.org>; gromacs-3.2.ebuild,
+ 29 Feb 2004; Donnie Berkholz <dberkholz@gentoo.org>; gromacs-3.2.ebuild,
files/gromacs-3.2-all-static-fix.patch:
Version bump. New xml2 USE flag.
*gromacs-3.1.4-r2 (28 Feb 2004)
- 28 Feb 2004; Donnie Berkholz <spyderous@gentoo.org>;
+ 28 Feb 2004; Donnie Berkholz <dberkholz@gentoo.org>;
gromacs-3.1.4-r2.ebuild:
Closing bug #42989 by installing binaries to /usr/bin. Also discovered libs
needed to be installed to /usr/lib. Enabled assembly for Alphas too, if any
Alpha user ever tries this.
- 04 Oct 2003; Donnie Berkholz <spyderous@gentoo.org>; gromacs-3.1.3.ebuild,
+ 04 Oct 2003; Donnie Berkholz <dberkholz@gentoo.org>; gromacs-3.1.3.ebuild,
gromacs-3.1.4.ebuild:
Pulling old versions.
- 04 Oct 2003; Donnie Berkholz <spyderous@gentoo.org>;
+ 04 Oct 2003; Donnie Berkholz <dberkholz@gentoo.org>;
gromacs-3.1.4-r1.ebuild:
Fixing fftw dep. Won't compile against fftw-3 yet, in part because it looks
for fftw3.h instead of fftw.h, and in part because MPI doesn't work in fftw-3
diff --git a/sci-chemistry/gromacs/metadata.xml b/sci-chemistry/gromacs/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/gromacs/metadata.xml
+++ b/sci-chemistry/gromacs/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/maid/ChangeLog b/sci-chemistry/maid/ChangeLog
index aaee70dd4d45..3f8a19c5a40d 100644
--- a/sci-chemistry/maid/ChangeLog
+++ b/sci-chemistry/maid/ChangeLog
@@ -1,27 +1,30 @@
# ChangeLog for sci-chemistry/maid
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/maid/ChangeLog,v 1.6 2006/02/23 23:15:53 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/maid/ChangeLog,v 1.7 2006/07/07 05:34:06 dberkholz Exp $
- 23 Feb 2006; Donnie Berkholz <spyderous@gentoo.org>; maid-20011112.ebuild:
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 23 Feb 2006; Donnie Berkholz <dberkholz@gentoo.org>; maid-20011112.ebuild:
Remove redundant src_compile(), reported by ciaranm.
- 23 Feb 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 23 Feb 2006; Donnie Berkholz <dberkholz@gentoo.org>;
-files/fix-compilation.patch:
Forgot to cvs rm it.
- 23 Feb 2006; Donnie Berkholz <spyderous@gentoo.org>; maid-20011112.ebuild:
+ 23 Feb 2006; Donnie Berkholz <dberkholz@gentoo.org>; maid-20011112.ebuild:
(#123634) Push big patch to mirrors.
- 15 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; maid-20011112.ebuild:
+ 15 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; maid-20011112.ebuild:
Fix SRC_URI.
- 15 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; maid-20011112.ebuild:
+ 15 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; maid-20011112.ebuild:
Fix license. The author informed me by email that it's intended to be freely
distributed, modified and redistributed.
*maid-20011112 (15 Dec 2005)
- 15 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 15 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/fix-compilation.patch, +files/fix-warnings.patch, +metadata.xml,
+maid-20011112.ebuild:
MAID does automatic fitting of protein X-ray crystallography electron
diff --git a/sci-chemistry/maid/metadata.xml b/sci-chemistry/maid/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/maid/metadata.xml
+++ b/sci-chemistry/maid/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/maxit/ChangeLog b/sci-chemistry/maxit/ChangeLog
index 4d1c60a084a3..a93968634a21 100644
--- a/sci-chemistry/maxit/ChangeLog
+++ b/sci-chemistry/maxit/ChangeLog
@@ -1,13 +1,16 @@
# ChangeLog for sci-chemistry/maxit
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/maxit/ChangeLog,v 1.2 2006/02/23 23:16:35 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/maxit/ChangeLog,v 1.3 2006/07/07 05:34:25 dberkholz Exp $
- 23 Feb 2006; Donnie Berkholz <spyderous@gentoo.org>; maxit-8.2.ebuild:
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 23 Feb 2006; Donnie Berkholz <dberkholz@gentoo.org>; maxit-8.2.ebuild:
Remove redundant src_compile(), reported by ciaranm.
*maxit-8.2 (20 Dec 2005)
- 20 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; +files/README,
+ 20 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; +files/README,
+files/README-source, +files/respect-cflags-and-fix-install.patch,
+metadata.xml, +maxit-8.2.ebuild:
An application for processing and curation of macromolecular structure data.
diff --git a/sci-chemistry/maxit/metadata.xml b/sci-chemistry/maxit/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/maxit/metadata.xml
+++ b/sci-chemistry/maxit/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/mead/ChangeLog b/sci-chemistry/mead/ChangeLog
index 6c1d7e3a399b..6e159d65c140 100644
--- a/sci-chemistry/mead/ChangeLog
+++ b/sci-chemistry/mead/ChangeLog
@@ -1,10 +1,13 @@
# ChangeLog for sci-chemistry/mead
-# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mead/ChangeLog,v 1.1 2005/12/17 21:02:40 spyderous Exp $
+# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mead/ChangeLog,v 1.2 2006/07/07 05:34:44 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*mead-2.2.5 (17 Dec 2005)
- 17 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 17 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/respect-cflags.patch, +metadata.xml, +mead-2.2.5.ebuild:
New electrostatic potential package: Macroscopic Electrostatics with Atomic
Detail.
diff --git a/sci-chemistry/mead/metadata.xml b/sci-chemistry/mead/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/mead/metadata.xml
+++ b/sci-chemistry/mead/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/molden/ChangeLog b/sci-chemistry/molden/ChangeLog
index 070dd077654f..751e7943c8ef 100644
--- a/sci-chemistry/molden/ChangeLog
+++ b/sci-chemistry/molden/ChangeLog
@@ -1,8 +1,11 @@
# ChangeLog for sci-chemistry/molden
# Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/molden/ChangeLog,v 1.14 2006/04/08 17:59:12 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/molden/ChangeLog,v 1.15 2006/07/07 05:35:03 dberkholz Exp $
- 08 Apr 2006; Donnie Berkholz <spyderous@gentoo.org>; -molden-3.9.ebuild,
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 08 Apr 2006; Donnie Berkholz <dberkholz@gentoo.org>; -molden-3.9.ebuild,
-molden-4.0.ebuild, -molden-4.1.ebuild:
Pull old versions, everyone's stabilized on 4.3.
@@ -18,10 +21,10 @@
20 Jan 2006; Joshua Jackson <tsunam@gentoo.org> molden-4.3.ebuild:
Stable on x86 for bug #119378
- 18 Jan 2006; Donnie Berkholz <spyderous@gentoo.org>; molden-4.3.ebuild:
+ 18 Jan 2006; Donnie Berkholz <dberkholz@gentoo.org>; molden-4.3.ebuild:
Fix dependencies for modular X.
- 18 Jan 2006; Donnie Berkholz <spyderous@gentoo.org>; molden-4.3.ebuild:
+ 18 Jan 2006; Donnie Berkholz <dberkholz@gentoo.org>; molden-4.3.ebuild:
Parallel build sporadically dies.
14 May 2005; Bryan Østergaard <kloeri@gentoo.org> molden-4.3.ebuild:
@@ -32,7 +35,7 @@
*molden-4.3 (05 Feb 2005)
- 05 Feb 2005; Donnie Berkholz <spyderous@gentoo.org>; +molden-4.3.ebuild:
+ 05 Feb 2005; Donnie Berkholz <dberkholz@gentoo.org>; +molden-4.3.ebuild:
(#79047) New version, supports gromacs file format and some other stuff.
29 Dec 2004; Ciaran McCreesh <ciaranm@gentoo.org> :
@@ -43,27 +46,27 @@
+molden-4.1.ebuild:
Moved from app-sci/molden to sci-chemistry/molden.
- 23 Dec 2004; Donnie Berkholz <spyderous@gentoo.org>; molden-4.1.ebuild:
+ 23 Dec 2004; Donnie Berkholz <dberkholz@gentoo.org>; molden-4.1.ebuild:
x86.
20 Nov 2004; Danny van Dyk <kugelfang@gentoo.org> molden-4.1.ebuild:
Marked ~amd64.
- 26 Oct 2004; Donnie Berkholz <spyderous@gentoo.org>; molden-3.9.ebuild,
+ 26 Oct 2004; Donnie Berkholz <dberkholz@gentoo.org>; molden-3.9.ebuild,
molden-4.0.ebuild, molden-4.1.ebuild:
Move eclasses from gcc to toolchain-funcs. Get rid of ${CC} use (#68990).
- 28 Jul 2004; Donnie Berkholz <spyderous@gentoo.org>; molden-3.9.ebuild,
+ 28 Jul 2004; Donnie Berkholz <dberkholz@gentoo.org>; molden-3.9.ebuild,
molden-4.0.ebuild, molden-4.1.ebuild:
Search for a fortran compiler, since gcc doesn't compile one by default
anymore (#58628).
- 27 Jul 2004; Donnie Berkholz <spyderous@gentoo.org>; molden-4.0.ebuild:
+ 27 Jul 2004; Donnie Berkholz <dberkholz@gentoo.org>; molden-4.0.ebuild:
x86.
*molden-4.1 (27 Jul 2004)
- 27 Jul 2004; Donnie Berkholz <spyderous@gentoo.org>; +molden-4.1.ebuild:
+ 27 Jul 2004; Donnie Berkholz <dberkholz@gentoo.org>; +molden-4.1.ebuild:
Version bump (#57960). Add virtual/libc and virtual/x11 to DEPEND. Upstream
changes include bugfixes and addition of interactive docking.
@@ -76,10 +79,10 @@
05 May 2004; Bryan Østergaard <kloeri@gentoo.org> molden-4.0.ebuild:
Stable on alpha.
- 21 Apr 2004; Donnie Berkholz <spyderous@gentoo.org>; molden-4.0.ebuild:
+ 21 Apr 2004; Donnie Berkholz <dberkholz@gentoo.org>; molden-4.0.ebuild:
~alpha for agriffis.
- 21 Apr 2004; Donnie Berkholz <spyderous@gentoo.org>; molden-4.0.ebuild:
+ 21 Apr 2004; Donnie Berkholz <dberkholz@gentoo.org>; molden-4.0.ebuild:
Some wizardly bash replacements for sed by Aron Griffis <agriffis@gentoo.org>
(#46816).
@@ -87,20 +90,20 @@
molden-4.0.ebuild:
Add ia64 keywords for bug 46559
- 13 Mar 2004; Donnie Berkholz <spyderous@gentoo.org>; :
+ 13 Mar 2004; Donnie Berkholz <dberkholz@gentoo.org>; :
Upstream changed the tarball. Fixing digest.
*molden-4.0 (28 Feb 2004)
- 28 Feb 2004; Donnie Berkholz <spyderous@gentoo.org>; molden-4.0.ebuild:
+ 28 Feb 2004; Donnie Berkholz <dberkholz@gentoo.org>; molden-4.0.ebuild:
Version bump. Uses 3.9 patch, so don't remove that when dropping 3.9.
- 28 Feb 2004; Donnie Berkholz <spyderous@gentoo.org>; molden-3.9.ebuild:
+ 28 Feb 2004; Donnie Berkholz <dberkholz@gentoo.org>; molden-3.9.ebuild:
Add missing glut dep for opengl USE.
*molden-3.9 (10 Nov 2003)
- 10 Nov 2003; Donnie Berkholz <spyderous@gentoo.org>; molden-3.9.ebuild,
+ 10 Nov 2003; Donnie Berkholz <dberkholz@gentoo.org>; molden-3.9.ebuild,
files/molden-3.9-fixMakefile.patch:
Thanks to Rossen Apostolov <rossen@protein.osaka-u.ac.jp> on bug #33001 for
the initial ebuild, with further modifications by me.
diff --git a/sci-chemistry/molden/metadata.xml b/sci-chemistry/molden/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/molden/metadata.xml
+++ b/sci-chemistry/molden/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/moldy/ChangeLog b/sci-chemistry/moldy/ChangeLog
index 9b9a574ee823..60b04baa75d4 100644
--- a/sci-chemistry/moldy/ChangeLog
+++ b/sci-chemistry/moldy/ChangeLog
@@ -1,14 +1,17 @@
# ChangeLog for sci-chemistry/moldy
# Copyright 2002-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/moldy/ChangeLog,v 1.7 2006/01/18 05:46:30 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/moldy/ChangeLog,v 1.8 2006/07/07 05:35:30 dberkholz Exp $
- 18 Jan 2006; Donnie Berkholz <spyderous@gentoo.org>; moldy-2.16e.ebuild:
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 18 Jan 2006; Donnie Berkholz <dberkholz@gentoo.org>; moldy-2.16e.ebuild:
Fix for modular X.
- 18 Jan 2006; Donnie Berkholz <spyderous@gentoo.org>; moldy-2.16e.ebuild:
+ 18 Jan 2006; Donnie Berkholz <dberkholz@gentoo.org>; moldy-2.16e.ebuild:
Fix SRC_URI.
- 25 May 2005; Donnie Berkholz <spyderous@gentoo.org>; moldy-2.16e.ebuild:
+ 25 May 2005; Donnie Berkholz <dberkholz@gentoo.org>; moldy-2.16e.ebuild:
Fix HOMEPAGE.
23 Jan 2005; <gongloo@gentoo.org> moldy-2.16e.ebuild:
@@ -27,13 +30,13 @@
18 May 2004; Mamoru KOMACHI <usata@gentoo.org> moldy-2.16e.ebuild:
Changed app-text/tetex to virutal/tetex.
- 30 Mar 2004; Donnie Berkholz <spyderous@gentoo.org>; moldy-2.16e.ebuild:
+ 30 Mar 2004; Donnie Berkholz <dberkholz@gentoo.org>; moldy-2.16e.ebuild:
Change x11-base/xfree dependency to virtual/x11.
27 Oct 2003; Patrick Kursawe <phosphan@gentoo.org> moldy-2.16e.ebuild:
Fixing sandbox issue from bug 20657
- 04 Oct 2003; Donnie Berkholz <spyderous@gentoo.org>; moldy-2.16e.ebuild:
+ 04 Oct 2003; Donnie Berkholz <dberkholz@gentoo.org>; moldy-2.16e.ebuild:
Adding what appears to be a non-optional tetex dependency. However there are
sandbox issues at present (bug #20657).
diff --git a/sci-chemistry/moldy/metadata.xml b/sci-chemistry/moldy/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/moldy/metadata.xml
+++ b/sci-chemistry/moldy/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/molmol/ChangeLog b/sci-chemistry/molmol/ChangeLog
index b35d21554a2b..47632d4ec6f9 100644
--- a/sci-chemistry/molmol/ChangeLog
+++ b/sci-chemistry/molmol/ChangeLog
@@ -1,33 +1,36 @@
# ChangeLog for sci-chemistry/molmol
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/molmol/ChangeLog,v 1.8 2006/02/20 22:25:03 metalgod Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/molmol/ChangeLog,v 1.9 2006/07/07 05:35:52 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
20 Feb 2006; Luis Medinas <metalgod@gentoo.org> molmol-2k_p2.ebuild:
Added ~amd64 keyword.
- 12 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; molmol-2k_p2.ebuild:
+ 12 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; molmol-2k_p2.ebuild:
Add modular X dependencies.
- 14 Jul 2005; Donnie Berkholz <spyderous@gentoo.org>; molmol-2k_p2.ebuild:
+ 14 Jul 2005; Donnie Berkholz <dberkholz@gentoo.org>; molmol-2k_p2.ebuild:
(#99001) Parallel build broken.
14 Jul 2005; David Holm <dholm@gentoo.org> molmol-2k_p2.ebuild:
Added to ~ppc.
- 13 Jul 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 13 Jul 2005; Donnie Berkholz <dberkholz@gentoo.org>;
files/pjf_RH9_molmol2k2.diff:
-L/usr/X11R6/lib is pointless.
- 13 Jul 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 13 Jul 2005; Donnie Berkholz <dberkholz@gentoo.org>;
files/pjf_RH9_molmol2k2.diff:
Link against libXpm, not libXp.
- 13 Jul 2005; Donnie Berkholz <spyderous@gentoo.org>; molmol-2k_p2.ebuild:
+ 13 Jul 2005; Donnie Berkholz <dberkholz@gentoo.org>; molmol-2k_p2.ebuild:
Missed one use of lib instead of get_libdir().
*molmol-2k_p2 (13 Jul 2005)
- 13 Jul 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 13 Jul 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/pjf_RH9_molmol2k2.diff, +metadata.xml, +molmol-2k_p2.ebuild:
Initial commit.
diff --git a/sci-chemistry/molmol/metadata.xml b/sci-chemistry/molmol/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/molmol/metadata.xml
+++ b/sci-chemistry/molmol/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/molscript/ChangeLog b/sci-chemistry/molscript/ChangeLog
index 6510e759bf75..4f1a1d51fa85 100644
--- a/sci-chemistry/molscript/ChangeLog
+++ b/sci-chemistry/molscript/ChangeLog
@@ -1,10 +1,13 @@
# ChangeLog for sci-chemistry/molscript
-# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/molscript/ChangeLog,v 1.1 2005/11/21 20:44:37 spyderous Exp $
+# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/molscript/ChangeLog,v 1.2 2006/07/07 05:36:11 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*molscript-2.1.2 (21 Nov 2005)
- 21 Nov 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 21 Nov 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/fix-makefile-shared.patch, +files/glutbitmap.h, +metadata.xml,
+molscript-2.1.2.ebuild:
New molecular graphics package. GLUT license is for files/glutbitmap.h.
diff --git a/sci-chemistry/molscript/metadata.xml b/sci-chemistry/molscript/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/molscript/metadata.xml
+++ b/sci-chemistry/molscript/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/mopac7/ChangeLog b/sci-chemistry/mopac7/ChangeLog
index 9fabea0e95f8..202ea452efb0 100644
--- a/sci-chemistry/mopac7/ChangeLog
+++ b/sci-chemistry/mopac7/ChangeLog
@@ -1,17 +1,20 @@
# ChangeLog for sci-chemistry/mopac7
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mopac7/ChangeLog,v 1.7 2006/05/13 22:14:08 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mopac7/ChangeLog,v 1.8 2006/07/07 05:36:30 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*mopac7-1.10-r1 (13 May 2006)
- 13 May 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 13 May 2006; Donnie Berkholz <dberkholz@gentoo.org>;
+mopac7-1.10-r1.ebuild:
Fix parallel build. Remove the really ugly LDFLAGS hack, it's no longer
needed. Cleaner installation of executable and wrapper.
*mopac7-1.10 (06 Dec 2005)
- 06 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; -mopac7-1.00.ebuild,
+ 06 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; -mopac7-1.00.ebuild,
+mopac7-1.10.ebuild:
New version. GCC-4 and 64-bit fixes, as well as new libmopac7.h
@@ -20,20 +23,20 @@
*mopac7-1.00-r1 (05 Aug 2005)
- 05 Aug 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 05 Aug 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+mopac7-1.00-r1.ebuild:
(#101288) Fix run_mopac7 shell script, courtesy of Mathias Weigt
<m.weigt@uni-bonn.de>.
- 10 Jul 2005; Donnie Berkholz <spyderous@gentoo.org>; mopac7-1.00.ebuild:
+ 10 Jul 2005; Donnie Berkholz <dberkholz@gentoo.org>; mopac7-1.00.ebuild:
(#98457) Parallel build broken.
- 10 Jul 2005; Donnie Berkholz <spyderous@gentoo.org>; mopac7-1.00.ebuild:
+ 10 Jul 2005; Donnie Berkholz <dberkholz@gentoo.org>; mopac7-1.00.ebuild:
Fix f2c dep to libf2c.
*mopac7-1.00 (08 Jul 2005)
- 08 Jul 2005; Donnie Berkholz <spyderous@gentoo.org>; +metadata.xml,
+ 08 Jul 2005; Donnie Berkholz <dberkholz@gentoo.org>; +metadata.xml,
+mopac7-1.00.ebuild:
Initial commit, ebuild by me. This will be useful for the new ghemical. It's
a quite solid semi-empirical package.
diff --git a/sci-chemistry/mopac7/metadata.xml b/sci-chemistry/mopac7/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/mopac7/metadata.xml
+++ b/sci-chemistry/mopac7/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/ortep3/ChangeLog b/sci-chemistry/ortep3/ChangeLog
index 952b0826118d..4f5968757ade 100644
--- a/sci-chemistry/ortep3/ChangeLog
+++ b/sci-chemistry/ortep3/ChangeLog
@@ -1,10 +1,13 @@
# ChangeLog for sci-chemistry/ortep3
-# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/ortep3/ChangeLog,v 1.1 2005/12/16 05:36:57 spyderous Exp $
+# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/ortep3/ChangeLog,v 1.2 2006/07/07 05:36:48 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*ortep3-1.0.3 (16 Dec 2005)
- 16 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; +metadata.xml,
+ 16 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; +metadata.xml,
+ortep3-1.0.3.ebuild:
Thermal ellipsoid plot program for crystal structure illustrations.
diff --git a/sci-chemistry/ortep3/metadata.xml b/sci-chemistry/ortep3/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/ortep3/metadata.xml
+++ b/sci-chemistry/ortep3/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/pdb-extract/ChangeLog b/sci-chemistry/pdb-extract/ChangeLog
index 0d0ce919e9d2..4a907c619ced 100644
--- a/sci-chemistry/pdb-extract/ChangeLog
+++ b/sci-chemistry/pdb-extract/ChangeLog
@@ -1,17 +1,20 @@
# ChangeLog for sci-chemistry/pdb-extract
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog,v 1.3 2006/04/26 03:53:20 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pdb-extract/ChangeLog,v 1.4 2006/07/07 05:37:05 dberkholz Exp $
- 26 Apr 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 26 Apr 2006; Donnie Berkholz <dberkholz@gentoo.org>;
pdb-extract-1.700.ebuild:
Keyword ~ppc.
- 24 Apr 2006; Donnie Berkholz <spyderous@gentoo.org>; ChangeLog:
+ 24 Apr 2006; Donnie Berkholz <dberkholz@gentoo.org>; ChangeLog:
Keyword ~ppc.
*pdb-extract-1.700 (20 Dec 2005)
- 20 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 20 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/respect-cflags-and-fix-install.patch, +metadata.xml,
+pdb-extract-1.700.ebuild:
Extract lots of information from Protein Data Bank files.
diff --git a/sci-chemistry/pdb-extract/metadata.xml b/sci-chemistry/pdb-extract/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/pdb-extract/metadata.xml
+++ b/sci-chemistry/pdb-extract/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/platon/ChangeLog b/sci-chemistry/platon/ChangeLog
index 84e667ce962a..1a12a47a7c43 100644
--- a/sci-chemistry/platon/ChangeLog
+++ b/sci-chemistry/platon/ChangeLog
@@ -1,23 +1,26 @@
# ChangeLog for sci-chemistry/platon
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/platon/ChangeLog,v 1.3 2006/06/23 15:58:56 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/platon/ChangeLog,v 1.4 2006/07/07 05:37:22 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*platon-20060621 (23 Jun 2006)
- 23 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 23 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>;
-platon-20051215.ebuild, -platon-20060530.ebuild, +platon-20060621.ebuild:
(#137734) Bump -- old versions no longer accessible.
*platon-20060530 (03 Jun 2006)
- 03 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 03 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>;
+platon-20060530.ebuild:
Bump to latest. Fix for gcc4 by linking against libf2c in the non-gcc3 case.
Keyword ~ppc.
*platon-20051215 (16 Dec 2005)
- 16 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; +metadata.xml,
+ 16 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; +metadata.xml,
+platon-20051215.ebuild:
Another crystallography package. This one considers itself a versatile,
SHELX-97 compatible, multipurpose tool.
diff --git a/sci-chemistry/platon/metadata.xml b/sci-chemistry/platon/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/platon/metadata.xml
+++ b/sci-chemistry/platon/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/probe/ChangeLog b/sci-chemistry/probe/ChangeLog
index 6382b84b9a19..29ecc536b850 100644
--- a/sci-chemistry/probe/ChangeLog
+++ b/sci-chemistry/probe/ChangeLog
@@ -1,10 +1,13 @@
# ChangeLog for sci-chemistry/probe
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/probe/ChangeLog,v 1.1 2006/06/04 09:03:48 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/probe/ChangeLog,v 1.2 2006/07/07 05:37:40 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*probe-2.11.050121 (04 Jun 2006)
- 04 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>; +metadata.xml,
+ 04 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>; +metadata.xml,
+probe-2.11.050121.ebuild:
New program that evaluates atomic packing within or between molecules.
diff --git a/sci-chemistry/probe/metadata.xml b/sci-chemistry/probe/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/probe/metadata.xml
+++ b/sci-chemistry/probe/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/psi/ChangeLog b/sci-chemistry/psi/ChangeLog
index c3f49b038a80..c9a0b01f2ac1 100644
--- a/sci-chemistry/psi/ChangeLog
+++ b/sci-chemistry/psi/ChangeLog
@@ -1,10 +1,13 @@
# ChangeLog for sci-chemistry/psi
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v 1.1 2006/02/12 06:04:10 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/psi/ChangeLog,v 1.2 2006/07/07 05:37:58 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*psi-3.2.3 (12 Feb 2006)
- 12 Feb 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 12 Feb 2006; Donnie Berkholz <dberkholz@gentoo.org>;
+files/add-libint-error-message.patch, +files/dont-build-libint.patch,
+files/try-more-compilers.patch, +files/try-pthread-for-blas-lapack.patch,
+files/use-external-libint.patch, +metadata.xml, +psi-3.2.3.ebuild:
diff --git a/sci-chemistry/psi/metadata.xml b/sci-chemistry/psi/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/psi/metadata.xml
+++ b/sci-chemistry/psi/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/reduce/ChangeLog b/sci-chemistry/reduce/ChangeLog
index c8c894d1aeaa..b77b810ec576 100644
--- a/sci-chemistry/reduce/ChangeLog
+++ b/sci-chemistry/reduce/ChangeLog
@@ -1,10 +1,13 @@
# ChangeLog for sci-chemistry/reduce
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/reduce/ChangeLog,v 1.1 2006/06/04 09:05:46 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/reduce/ChangeLog,v 1.2 2006/07/07 05:38:15 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*reduce-2.21.030604 (04 Jun 2006)
- 04 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 04 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>;
+files/2.21.030604-gcc4.patch, +metadata.xml, +reduce-2.21.030604.ebuild:
New package to add hydrogens to a Protein Data Bank (PDB) molecule structure
file.
diff --git a/sci-chemistry/reduce/metadata.xml b/sci-chemistry/reduce/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/reduce/metadata.xml
+++ b/sci-chemistry/reduce/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/shelx/ChangeLog b/sci-chemistry/shelx/ChangeLog
index e26e1e9e22ea..812a41d76a21 100644
--- a/sci-chemistry/shelx/ChangeLog
+++ b/sci-chemistry/shelx/ChangeLog
@@ -1,15 +1,18 @@
# ChangeLog for sci-chemistry/shelx
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/shelx/ChangeLog,v 1.2 2006/06/17 00:56:16 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/shelx/ChangeLog,v 1.3 2006/07/07 05:38:33 dberkholz Exp $
- 17 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 17 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>;
shelx-20060317.ebuild:
(#75384) Add the dosformat USE flag, useful for mixed Linux/Windows
environments.
*shelx-20060317 (05 Jun 2006)
- 05 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 05 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>;
+files/20060317-autotool.patch, +metadata.xml, +shelx-20060317.ebuild:
New program for X-ray crystallographic structure determination.
diff --git a/sci-chemistry/shelx/metadata.xml b/sci-chemistry/shelx/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/shelx/metadata.xml
+++ b/sci-chemistry/shelx/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/sparky/ChangeLog b/sci-chemistry/sparky/ChangeLog
index fb0040061e34..8cccae3c2a50 100644
--- a/sci-chemistry/sparky/ChangeLog
+++ b/sci-chemistry/sparky/ChangeLog
@@ -1,16 +1,19 @@
# ChangeLog for sci-chemistry/sparky
-# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/sparky/ChangeLog,v 1.3 2005/12/18 20:42:32 spyderous Exp $
+# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/sparky/ChangeLog,v 1.4 2006/07/07 05:39:01 dberkholz Exp $
- 18 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; sparky-3.111.ebuild:
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 18 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; sparky-3.111.ebuild:
Prefer RESTRICT=mirror over nomirror, as portage code does.
- 18 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; sparky-3.111.ebuild:
+ 18 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; sparky-3.111.ebuild:
We can't mirror this.
*sparky-3.111 (18 Dec 2005)
- 18 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 18 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/fix-install.patch, +metadata.xml, +sparky-3.111.ebuild:
A new graphical NMR assignment and integration program for proteins, nucleic
acids, and other polymers. Very strange build system; takes lots of hacking
diff --git a/sci-chemistry/sparky/metadata.xml b/sci-chemistry/sparky/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/sparky/metadata.xml
+++ b/sci-chemistry/sparky/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/tinker/ChangeLog b/sci-chemistry/tinker/ChangeLog
index 2adda0e4f758..30bc06605886 100644
--- a/sci-chemistry/tinker/ChangeLog
+++ b/sci-chemistry/tinker/ChangeLog
@@ -1,23 +1,26 @@
# ChangeLog for sci-chemistry/tinker
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/tinker/ChangeLog,v 1.4 2006/06/21 14:17:21 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/tinker/ChangeLog,v 1.5 2006/07/07 05:39:20 dberkholz Exp $
+
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
*tinker-4.2-r1 (21 Jun 2006)
- 21 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>; -tinker-4.2.ebuild,
+ 21 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>; -tinker-4.2.ebuild,
+tinker-4.2-r1.ebuild:
(#119142) Make Java frontend work (Josh Nichols).
- 21 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>; tinker-4.2.ebuild:
+ 21 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>; tinker-4.2.ebuild:
Port to gcc4.
- 03 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; tinker-4.2.ebuild:
+ 03 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; tinker-4.2.ebuild:
Note that tinker script has hardcoded blackdown in it. This is needed
because java-config's exit codes return 0, even on failure.
*tinker-4.2 (03 Dec 2005)
- 03 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; +metadata.xml,
+ 03 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; +metadata.xml,
+tinker-4.2.ebuild:
(#35945) New molecular mechanics package. Heavily modified ebuild based on
that of Jeremy Warren <jwarren@cheesefoam.dyndns.org>.
diff --git a/sci-chemistry/tinker/metadata.xml b/sci-chemistry/tinker/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/tinker/metadata.xml
+++ b/sci-chemistry/tinker/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/validation/ChangeLog b/sci-chemistry/validation/ChangeLog
index 78c98d6724a2..1f7c31b8b77a 100644
--- a/sci-chemistry/validation/ChangeLog
+++ b/sci-chemistry/validation/ChangeLog
@@ -1,30 +1,33 @@
# ChangeLog for sci-chemistry/validation
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/validation/ChangeLog,v 1.5 2006/06/15 02:34:38 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/validation/ChangeLog,v 1.6 2006/07/07 05:39:38 dberkholz Exp $
- 15 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 15 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>;
validation-6.2.ebuild:
Drop acronym in description.
- 23 Feb 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 23 Feb 2006; Donnie Berkholz <dberkholz@gentoo.org>;
validation-6.2.ebuild:
Remove redundant src_compile(), reported by ciaranm.
*validation-6.2 (20 Dec 2005)
- 20 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; +files/README,
+ 20 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; +files/README,
+files/README-source, +files/respect-cflags-and-fix-install.patch,
-files/respect-flags-and-add-gcc4.patch, +validation-6.2.ebuild,
-validation-8.061.ebuild:
Add a fixed version; works with other RCSB apps and libraries.
- 19 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 19 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
validation-8.061.ebuild:
Remove commented-out sections.
*validation-8.061 (19 Dec 2005)
- 19 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 19 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/respect-flags-and-add-gcc4.patch, +metadata.xml,
+validation-8.061.ebuild:
Add a set of tools used by the PDB for processing and checking structure data.
diff --git a/sci-chemistry/validation/metadata.xml b/sci-chemistry/validation/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/validation/metadata.xml
+++ b/sci-chemistry/validation/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/viewmol/ChangeLog b/sci-chemistry/viewmol/ChangeLog
index 5a435424440e..0aacd2a2d9f3 100644
--- a/sci-chemistry/viewmol/ChangeLog
+++ b/sci-chemistry/viewmol/ChangeLog
@@ -1,14 +1,17 @@
# ChangeLog for sci-chemistry/viewmol
-# Copyright 1999-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/viewmol/ChangeLog,v 1.2 2005/12/02 19:49:40 spyderous Exp $
+# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/viewmol/ChangeLog,v 1.3 2006/07/07 05:39:55 dberkholz Exp $
- 02 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; viewmol-2.4.1.ebuild:
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 02 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; viewmol-2.4.1.ebuild:
Fix up modular X deps -- add libXp and libXi, remove libX11 and libXt as
redundant.
*viewmol-2.4.1 (02 Dec 2005)
- 02 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 02 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/2.4.1-change-default-path-to-usr.patch,
+files/2.4.1-look-for-python-in-right-place.patch,
+files/2.4.1-remove-icc-check.patch,
diff --git a/sci-chemistry/viewmol/metadata.xml b/sci-chemistry/viewmol/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/viewmol/metadata.xml
+++ b/sci-chemistry/viewmol/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>
diff --git a/sci-chemistry/webmo/ChangeLog b/sci-chemistry/webmo/ChangeLog
index a8a3b91472be..e366032a81c9 100644
--- a/sci-chemistry/webmo/ChangeLog
+++ b/sci-chemistry/webmo/ChangeLog
@@ -1,31 +1,34 @@
# ChangeLog for sci-chemistry/webmo
# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/webmo/ChangeLog,v 1.8 2006/06/20 15:14:24 spyderous Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/webmo/ChangeLog,v 1.9 2006/07/07 05:40:26 dberkholz Exp $
- 20 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>; webmo-6.1.010.ebuild:
+ 07 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
+ Update to my new email address.
+
+ 20 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>; webmo-6.1.010.ebuild:
Add a warning about overwriting info with etc-update.
- 20 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>;
+ 20 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>;
-webmo-6.0.003.ebuild:
Pull old version.
*webmo-6.1.010 (20 Jun 2006)
- 20 Jun 2006; Donnie Berkholz <spyderous@gentoo.org>; files/reconfig,
+ 20 Jun 2006; Donnie Berkholz <dberkholz@gentoo.org>; files/reconfig,
+webmo-6.1.010.ebuild:
Bump. Significant enhancements to reconfig script to handle webapp-config
upgrades properly via etc-update.
- 23 Feb 2006; Donnie Berkholz <spyderous@gentoo.org>; webmo-6.0.003.ebuild:
+ 23 Feb 2006; Donnie Berkholz <dberkholz@gentoo.org>; webmo-6.0.003.ebuild:
Remove redundant src_compile(), reported by ciaranm.
- 04 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; files/reconfig:
+ 04 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; files/reconfig:
Don't overwrite the actual .int file, copy into ._cfg* for etc-update.
- 04 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>; +files/reconfig:
+ 04 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>; +files/reconfig:
Add hook script, to be run when installing to live host.
- 04 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 04 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
-files/dont-be-interactive-if-root.patch,
+files/dont-be-interactive-or-diagnose.patch,
-files/dont-check-unneeded-things.patch, webmo-6.0.003.ebuild:
@@ -33,7 +36,7 @@
*webmo-6.0.003 (04 Dec 2005)
- 04 Dec 2005; Donnie Berkholz <spyderous@gentoo.org>;
+ 04 Dec 2005; Donnie Berkholz <dberkholz@gentoo.org>;
+files/add-gamess-data-directory.patch,
+files/dont-be-interactive-if-root.patch,
+files/dont-check-unneeded-things.patch, +files/gentoo-locations.patch,
diff --git a/sci-chemistry/webmo/metadata.xml b/sci-chemistry/webmo/metadata.xml
index 211b8bd0f0a4..0051059a6ec9 100644
--- a/sci-chemistry/webmo/metadata.xml
+++ b/sci-chemistry/webmo/metadata.xml
@@ -3,7 +3,7 @@
<pkgmetadata>
<herd>sci</herd>
<maintainer>
-<email>spyderous@gentoo.org</email>
+<email>dberkholz@gentoo.org</email>
<name>Donnie Berkholz</name>
</maintainer>
</pkgmetadata>