diff options
| -rw-r--r-- | dev-lang/R/Manifest | 1 | ||||
| -rw-r--r-- | dev-lang/R/R-3.3.1.ebuild | 200 |
2 files changed, 0 insertions, 201 deletions
diff --git a/dev-lang/R/Manifest b/dev-lang/R/Manifest index 9403f0b02c95..075c16f710d3 100644 --- a/dev-lang/R/Manifest +++ b/dev-lang/R/Manifest @@ -1,6 +1,5 @@ DIST R-20130129.bash_completion.bz2 4209 SHA256 487e969b94563fec98ec58de7e6142e9361d4219088add0fca282b482a9e01b1 SHA512 910b26e16cfebe677f438abfa5f2652e582db143d91dbf0e7d4b1ea33462c7e5c89c3a3619c63ae98bba26b11a5adb16eda9d344f8cdbe4f0feabc546993c1a5 WHIRLPOOL 2368efaed37fcb6e010f6a234864631f68549bd8e3f733561170cc5b28f5557e546d8561246fb265a481a47991a262fec3acf6abc1dc3929a9357405e0d3c6fc DIST R-3.2.2.tar.gz 29772864 SHA256 9c9152e74134b68b0f3a1c7083764adc1cb56fd8336bec003fd0ca550cd2461d SHA512 71ba470875262b9f00fb6970f209788df4dad30e0a28373b824b60d8bc6401afb7786e65387663c6490c7ddcd2bfd7f808a270a3e63238f3d7565d5f93607138 WHIRLPOOL fea59929ada1d67dafc6ad89409d18ad173af7990384033f490a00e0f794d9919aecf7cd37089d105fe03b9cf64d079e5d148622571cec3eb924c1c5bd00081e -DIST R-3.3.1.tar.gz 29848329 SHA256 3dc59ae5831f5380f83c169bac2103ad052efe0ecec4ffa74bde4d85a0fda9e2 SHA512 d0ff85e99b9ec9cac672aa30d7d1a854778c6a610bcc5336e8c60c8c74f20856f2bfeae085af793fad646ff45cb4677d9d6dcbaa18212591f72f00a02339f4cd WHIRLPOOL 6e2edb60173a54c8b25d16201c24176b3ea837287e6d306c9d2e2c4578764b0d469d9c17228b6be67dda646a4272f30b331dbbc6238a6e851eb5320f04c7f151 DIST R-3.3.2.tar.gz 29440670 SHA256 d294ad21e9f574fb4828ebb3a94b8cb34f4f304a41687a994be00dd41a4e514c SHA512 06a98687c0b180cb0bfd57440ea26088212d9f48948d503136475bf54b42d72cfec5bea7e333c0cedd60733bd614dd0f8c2eced7e24478b6c89f48e8d0c43482 WHIRLPOOL a68112df87552cc6ca8cd6b78b99dda2a22b8f4cfcd87a4512d541d25ef21358ede1ba71b4d7e9f274bf4e4340de18355a777d9af2ed41c0a498fa11d91cf0d8 DIST R-3.4.1.tar.gz 30200109 SHA256 02b1135d15ea969a3582caeb95594a05e830a6debcdb5b85ed2d5836a6a3fc78 SHA512 19bd50c87dc001ef947c15c1760f27ac8986ff6b43c6d90d3093ae184e42963027ef06faf31ec57ac9e519af7a35a2f53f8ea23ef75d800ebbd02945cedc4651 WHIRLPOOL 1396303a7ef7a0e8920af867e6b68e171152578231c9a7ad5020b494124922aae634c1ce6d0f2b2f8441481736b93c3abffe142f2af78dbb0dbc754c4faec3f1 DIST R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion 13596 SHA256 7e452a23e0bd96b1076280448d130adab229b8ea37cd4531db77391868a31e97 SHA512 9ccd19bb1b0c18a2f13035ccd6809447429e197e298fb4d1df808ef345d723b42f75a1b91c349f6dbb46e4a82e59ef33e11300c495d79b63d670d0c0f2b16a06 WHIRLPOOL 49fd55e6a52d55f0aa15d3a117394793b6fba6f1b69a26911a2b2d7c40a65c8ec2246851edc3abb52849930c48e817ee62319ae8bc1db0a9b802c95fcb1554e0 diff --git a/dev-lang/R/R-3.3.1.ebuild b/dev-lang/R/R-3.3.1.ebuild deleted file mode 100644 index 05155cdb3cae..000000000000 --- a/dev-lang/R/R-3.3.1.ebuild +++ /dev/null @@ -1,200 +0,0 @@ -# Copyright 1999-2016 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit bash-completion-r1 autotools eutils flag-o-matic fortran-2 multilib versionator toolchain-funcs - -BCP=${PN}-20130129.bash_completion -DESCRIPTION="Language and environment for statistical computing and graphics" -HOMEPAGE="http://www.r-project.org/" -SRC_URI=" - mirror://cran/src/base/R-3/${P}.tar.gz - https://dev.gentoo.org/~bicatali/distfiles/${BCP}.bz2" - -LICENSE="|| ( GPL-2 GPL-3 ) LGPL-2.1" -SLOT="0" -KEYWORDS="~amd64 ~hppa ~ia64 ~ppc ~ppc64 ~sparc ~x86 ~x86-fbsd ~amd64-linux ~x86-linux ~x64-macos" -IUSE="cairo doc icu java jpeg lapack minimal nls openmp perl png prefix profile readline static-libs tiff tk X" -REQUIRED_USE="png? ( || ( cairo X ) ) jpeg? ( || ( cairo X ) ) tiff? ( || ( cairo X ) )" - -CDEPEND=" - app-arch/bzip2:0= - app-arch/xz-utils:0= - app-text/ghostscript-gpl - >=dev-libs/libpcre-8.35:3= - virtual/blas:0 - || ( >=sys-apps/coreutils-8.15 sys-freebsd/freebsd-bin app-misc/realpath ) - cairo? ( x11-libs/cairo:0=[X] x11-libs/pango:0= ) - icu? ( dev-libs/icu:= ) - jpeg? ( virtual/jpeg:0 ) - lapack? ( virtual/lapack:0 ) - perl? ( dev-lang/perl ) - png? ( media-libs/libpng:0= ) - readline? ( sys-libs/readline:0= ) - tiff? ( media-libs/tiff:0= ) - tk? ( dev-lang/tk:0= ) - X? ( x11-libs/libXmu:0= x11-misc/xdg-utils )" - -DEPEND="${CDEPEND} - virtual/pkgconfig - doc? ( - virtual/latex-base - dev-texlive/texlive-fontsrecommended - )" - -RDEPEND="${CDEPEND} - >=sys-libs/zlib-1.2.5.1-r2:0[minizip] - java? ( >=virtual/jre-1.5 )" - -RESTRICT="minimal? ( test )" - -pkg_setup() { - if use openmp; then - if [[ $(tc-getCC) == *gcc ]] && ! tc-has-openmp; then - ewarn "OpenMP is not available in your current selected gcc" - die "need openmp capable gcc" - fi - FORTRAN_NEED_OPENMP=1 - fi - fortran-2_pkg_setup - filter-ldflags -Wl,-Bdirect -Bdirect - # avoid using existing R installation - unset R_HOME - # Temporary fix for bug #419761 - if [[ ($(tc-getCC) == *gcc) && ($(gcc-version) == 4.7) ]]; then - append-flags -fno-ipa-cp-clone - fi -} - -src_prepare() { - epatch \ - "${FILESDIR}"/${PN}-2.11.1-parallel.patch \ - "${FILESDIR}"/${PN}-2.13.1-zlib_header_fix.patch \ - "${FILESDIR}"/${PN}-3.0.0-rmath-shared.patch - - # fix packages.html for doc (gentoo bug #205103) - sed -i \ - -e "s:../../../library:../../../../$(get_libdir)/R/library:g" \ - src/library/tools/R/Rd.R || die - - # fix Rscript path when installed (gentoo bug #221061) - sed -i \ - -e "s:-DR_HOME='\"\$(rhome)\"':-DR_HOME='\"${EROOT%/}/usr/$(get_libdir)/${PN}\"':" \ - src/unix/Makefile.in || die "sed unix Makefile failed" - - # fix HTML links to manual (gentoo bug #273957) - sed -i \ - -e 's:\.\./manual/:manual/:g' \ - $(grep -Flr ../manual/ doc) || die "sed for HTML links failed" - - use lapack && \ - export LAPACK_LIBS="$($(tc-getPKG_CONFIG) --libs lapack)" - - if use X; then - export R_BROWSER="$(type -p xdg-open)" - export R_PDFVIEWER="$(type -p xdg-open)" - fi - use perl && \ - export PERL5LIB="${S}/share/perl:${PERL5LIB:+:}${PERL5LIB}" - - # don't search /usr/local - sed -i -e '/FLAGS=.*\/local\//c\: # removed by ebuild' configure.ac || die - # Fix for Darwin (OS X) - if use prefix; then - if [[ ${CHOST} == *-darwin* ]] ; then - sed -i \ - -e 's:-install_name libR.dylib:-install_name ${libdir}/R/lib/libR.dylib:' \ - -e 's:-install_name libRlapack.dylib:-install_name ${libdir}/R/lib/libRlapack.dylib:' \ - -e 's:-install_name libRblas.dylib:-install_name ${libdir}/R/lib/libRblas.dylib:' \ - -e "/SHLIB_EXT/s/\.so/.dylib/" \ - configure.ac || die - # sort of "undo" 2.14.1-rmath-shared.patch - sed -i \ - -e "s:-Wl,-soname=libRmath.so:-install_name ${EROOT%/}/usr/$(get_libdir)/libRmath.dylib:" \ - src/nmath/standalone/Makefile.in || die - else - append-ldflags -Wl,-rpath="${EROOT%/}/usr/$(get_libdir)/R/lib" - fi - fi - AT_M4DIR=m4 eaclocal - eautoconf -} - -src_configure() { - # --with-system-tre \ - # tre is patched from upstream - econf \ - --enable-byte-compiled-packages \ - --enable-R-shlib \ - --disable-R-framework \ - --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" \ - --docdir="${EPREFIX}/usr/share/doc/${PF}" \ - rdocdir="${EPREFIX}/usr/share/doc/${PF}" \ - $(use_enable java) \ - $(use_enable nls) \ - $(use_enable openmp) \ - $(use_enable profile R-profiling) \ - $(use_enable profile memory-profiling) \ - $(use_enable static-libs static) \ - $(use_enable static-libs R-static-lib) \ - $(use_with cairo) \ - $(use_with icu ICU) \ - $(use_with jpeg jpeglib) \ - $(use_with lapack) \ - $(use_with !minimal recommended-packages) \ - $(use_with png libpng) \ - $(use_with readline) \ - $(use_with tiff libtiff) \ - $(use_with tk tcltk) \ - $(use_with tk tk-config "${EPREFIX}"/usr/lib/tkConfig.sh) \ - $(use_with tk tcl-config "${EPREFIX}"/usr/lib/tclConfig.sh) \ - $(use_with X x) -} - -src_compile() { - export VARTEXFONTS="${T}/fonts" - emake AR="$(tc-getAR)" - emake -C src/nmath/standalone \ - shared $(use static-libs && echo static) AR="$(tc-getAR)" - use doc && emake info pdf -} - -src_install() { - default - emake -j1 -C src/nmath/standalone DESTDIR="${D}" install - - if use doc; then - emake DESTDIR="${D}" install-info install-pdf - dosym ../manual /usr/share/doc/${PF}/html/manual - fi - - cat > 99R <<-EOF - LDPATH=${EROOT%/}/usr/$(get_libdir)/${PN}/lib - R_HOME=${EROOT%/}/usr/$(get_libdir)/${PN} - EOF - doenvd 99R - newbashcomp "${WORKDIR}"/${BCP} ${PN} - # The buildsystem has a different understanding of install_names than - # we require. Since it builds modules like shared objects (wrong), many - # objects (all modules) get an incorrect install_name. Fixing the build - # system here is not really trivial. - if [[ ${CHOST} == *-darwin* ]] ; then - local mod - pushd "${ED}"/usr/lib/R > /dev/null - for mod in $(find . -name "*.dylib") ; do - mod=${mod#./} - install_name_tool -id "${EPREFIX}/usr/lib/R/${mod}" \ - "${mod}" - done - popd > /dev/null - fi - docompress -x /usr/share/doc/${PF}/{BioC_mirrors.csv,CRAN_mirrors.csv,KEYWORDS.db,NEWS.rds} -} - -pkg_postinst() { - if use java; then - einfo "Re-initializing java paths for ${P}" - R CMD javareconf - fi -} |