diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2016-04-02 12:09:36 +0200 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2016-04-02 12:09:56 +0200 |
| commit | e9cac45475fccd02e6d40c58fd876ca63b2e16f2 (patch) | |
| tree | df64a4251831c89a45c0e7a3421a5dfb158329fb /sci-biology | |
| parent | dev-util/trinity: src_configure() no longer needed (diff) | |
| download | gentoo-e9cac45475fccd02e6d40c58fd876ca63b2e16f2.tar.gz gentoo-e9cac45475fccd02e6d40c58fd876ca63b2e16f2.tar.bz2 gentoo-e9cac45475fccd02e6d40c58fd876ca63b2e16f2.zip | |
sci-biology/rebase: Version Bump
Package-Manager: portage-2.2.27
Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/rebase/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-1604.ebuild | 46 |
2 files changed, 47 insertions, 0 deletions
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index 3afe7ef9ac49..fdaa1dfa6881 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -1,2 +1,3 @@ DIST rebase-1601.tar.xz 99890720 SHA256 de0f7dd6cf831c52434e7434491b9c738c41aab51c8f8d91b243569f25209eb8 SHA512 a6e3faf7fc2eaf475605ed72db7f1cfdc4ba8c280f1650f723c5a664090ed64e7ac014012042c466d65edea8b2767bbcb0f38c3d5b69dbdb35e89cf0685c92ad WHIRLPOOL f06338c0d6ef59d7ac792f6f7fc48338b73d659614c0694109152fd33606174be6741cb662478f38e37e9622118de27c3c30c537b741b49e218f64973fe2c783 DIST rebase-1602.tar.xz 101007300 SHA256 26257dc10a6aba54024772956ae03e8530d4b2176db60dcc386427196a936d0b SHA512 7a00a11019124a835ef3d328c33cc4ab9d59665b3c929cf02a44bc09de8ca53185b939057705ee6ce79eeddc9ca9b8246582895b949dd38abe9066a380e3a2c9 WHIRLPOOL fac62146ab6ff09895cc9e4ece2b4869910c90c342051c5446085267585362adcc8a30af66a58d068d86c3eb6e7a37ceb32224a69114aa629a62a958fae09ed0 +DIST rebase-1604.tar.xz 102817536 SHA256 f234eadba5aa30573d664c9d9caab480ecbb383f0beab256e149296ee5d982ef SHA512 8ba6a24a8cf1b71a1ac2e0fb1634c0307d570af459fc940639046bd57362f3750e5f0390bcb7f3c7d2b924e1a5bf02825b5feb87a1f7d670d755f3b843df91a3 WHIRLPOOL 8ccaf435d7582fe1b86676037aaf7b0db742cd8d998a55d400f941a94e53731e1814028e1fed1be46f53bea702b570a1bffd73ba328ee06db17adcd731e3733c diff --git a/sci-biology/rebase/rebase-1604.ebuild b/sci-biology/rebase/rebase-1604.ebuild new file mode 100644 index 000000000000..9adb365ae5f1 --- /dev/null +++ b/sci-biology/rebase/rebase-1604.ebuild @@ -0,0 +1,46 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +MY_PV=${PV#1} + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +SLOT="0" +LICENSE="public-domain" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" +IUSE="emboss minimal" + +RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" +DEPEND="${RDEPEND}" + +RESTRICT="binchecks strip" + +src_compile() { + if use emboss; then + echo; einfo "Indexing Rebase for usage with EMBOSS." + mkdir REBASE || die + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ + -protofile proto.${MY_PV} -equivalences \ + || die "Indexing Rebase failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${MY_PV} proto.${MY_PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} + insinto /usr/share/EMBOSS/data + doins REBASE/embossre.equ + fi +} |