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# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
EAPI=6
DESCRIPTION="Transcriptome assembler and RNA-Seq analysis on BAM files aka cufflinks"
HOMEPAGE="https://ccb.jhu.edu/software/stringtie
https://github.com/gpertea/stringtie"
SRC_URI="http://ccb.jhu.edu/software/stringtie/dl/${P}.tar.gz"
LICENSE="Artistic-2"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE=""
# contains bundled gclib
DEPEND="sci-biology/samtools:0.1-legacy" # bundled samtools-0.1.18
RDEPEND="${DEPEND}"
src_compile(){
emake release
}
src_install(){
dobin stringtie
dodoc README
}
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