sci-biology/salmon/salmon-0.3.2.ebuild


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# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2

EAPI=6

inherit cmake-utils

DESCRIPTION="Transcript-level quantification from RNA-seq reads using lightweight alignments"
HOMEPAGE="https://github.com/COMBINE-lab/salmon"
SRC_URI="https://github.com/COMBINE-lab/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz"

LICENSE="GPL-3"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""

PATCHES=( "${FILESDIR}"/${P}-no-boost-static.patch )

DEPEND="dev-libs/boost:0
		dev-libs/jemalloc
		dev-cpp/tbb"
RDEPEND="${DEPEND}"

src_install() {
	cmake-utils_src_install
	rm -r "${ED}"/usr/tests || die
}