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# Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2

EAPI=7

PYTHON_COMPAT=( python2_7 python3_{5,6,7,8} )

inherit distutils-r1

DESCRIPTION="Use BED and GFF files from python using BEDtools"
HOMEPAGE="https://daler.github.io/pybedtools"
SRC_URI="https://github.com/daler/pybedtools/archive/v${PV}.tar.gz -> ${P}.tar.gz"

LICENSE="MIT"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""

RDEPEND="
	sci-biology/bedtools
	sci-biology/pysam"
DEPEND="${RDEPEND}
	dev-python/cython[${PYTHON_USEDEP}]"

src_compile(){
	python setup.py cythonize
	default
}