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# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
EAPI=5
PYTHON_COMPAT=( python2_7 )
PERL_EXPORT_PHASE_FUNCTIONS=no
inherit perl-module eutils python-r1 toolchain-funcs
DESCRIPTION="Validate, compare and draw summary statistics for GTF files"
HOMEPAGE="http://mblab.wustl.edu/software.html"
SRC_URI="
http://mblab.wustl.edu/software/download/${PN}-${PV}.tar.gz
http://mblab.wustl.edu/software/download/eval-documentation.pdf"
LICENSE="GPL-2+"
SLOT="0"
KEYWORDS="~amd64"
IUSE=""
REQUIRED_USE="${PYTHON_REQUIRED_USE}"
DEPEND="${PYTHON_DEPS}
dev-lang/tk:0=
sci-biology/vcftools
sci-visualization/gnuplot"
RDEPEND="${DEPEND}"
src_install(){
dobin *.pl
# TODO: prepend shebang lines to *.py files
# https://bugs.gentoo.org/show_bug.cgi?id=602580
sed -i -e "1i #!/usr/bin/env python" RangeFinder.py || die
python_foreach_impl python_doscript *.py
dodoc \
"${DISTDIR}"/eval-documentation.pdf \
help/*.ps
insinto /usr/share/${PN}
doins *.gtf
perl_set_version
insinto ${VENDOR_LIB}
doins *.pm
}
pkg_postinst(){
ewarn "The version of validate_gtf.pl bundled with eval differs a bit from"
ewarn "validate_gtf-1.0.pl from http://mblab.wustl.edu/software.html#validategtf"
}
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