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# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
EAPI=3
inherit java-pkg-2 java-ant-2
[ "$PV" == "9999" ] && inherit subversion
DESCRIPTION="The Apollo genome editor is a Java-based application for browsing and annotating genomic sequences."
HOMEPAGE="http://gmod.org/wiki/Apollo"
if [ "$PV" == "9999" ]; then
#SRC_URI="http://gmod.svn.sourceforge.net/viewvc/gmod/apollo/?view=tar" # Apollo_unix.sh
ESVN_REPO_URI="https://gmod.svn.sourceforge.net/svnroot/gmod/apollo/trunk"
#KEYWORDS="~amd64 ~x86"
else
SRC_URI="http://apollo.berkeleybop.org/current/installers/Apollo_unix.sh"
#KEYWORDS="~amd64 ~x86"
fi
LICENSE="Artistic"
SLOT="0"
IUSE=""
KEYWORDS=""
DEPEND="dev-vcs/subversion
>=virtual/jdk-1.5
>=dev-java/sun-jdk-1.5
dev-java/ant-core
dev-lang/perl"
RDEPEND=">=virtual/jre-1.5
${DEPEND}"
src_unpack() {
subversion_src_unpack || die
}
src_compile() {
cd src/java || die
ant compile || die
}
src_install() {
java-pkg_dojar jars/apollo.jar || die
echo "PATH=/opt/Apollo" > 99Apollo
doenvd 99Apollo || die
}
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