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authorJustin Lecher <jlec@gentoo.org>2017-01-12 19:27:12 +0000
committerJustin Lecher <jlec@gentoo.org>2017-01-12 19:27:12 +0000
commit0a1f117b51e7e096dcbf6972a0bc4c549f453dde (patch)
tree62f9e86eedbfa1bb4d88e70b03c541133d5acfdc /sci-chemistry
parentDrop old package (diff)
downloadsci-0a1f117b51e7e096dcbf6972a0bc4c549f453dde.tar.gz
sci-0a1f117b51e7e096dcbf6972a0bc4c549f453dde.tar.bz2
sci-0a1f117b51e7e096dcbf6972a0bc4c549f453dde.zip
Drop old package
Requires gtk:1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/simpson/Manifest3
-rw-r--r--sci-chemistry/simpson/files/3.0.1-gentoo.patch28
-rw-r--r--sci-chemistry/simpson/files/3.0.1-type.patch110
-rw-r--r--sci-chemistry/simpson/files/3.1.0-gentoo.patch32
-rw-r--r--sci-chemistry/simpson/files/3.1.2-gentoo.patch114
-rw-r--r--sci-chemistry/simpson/metadata.xml8
-rw-r--r--sci-chemistry/simpson/simpson-3.0.1.ebuild47
-rw-r--r--sci-chemistry/simpson/simpson-3.1.0.ebuild47
-rw-r--r--sci-chemistry/simpson/simpson-3.1.2.ebuild47
9 files changed, 0 insertions, 436 deletions
diff --git a/sci-chemistry/simpson/Manifest b/sci-chemistry/simpson/Manifest
deleted file mode 100644
index 31256eba7..000000000
--- a/sci-chemistry/simpson/Manifest
+++ /dev/null
@@ -1,3 +0,0 @@
-DIST simpson-source-3.0.1.tgz 383619 SHA256 77c5946b4a02b4e743b11dae4514935a2a66f4ed12e700845ccb49ee4c56ed17 SHA512 760d15ee130bfbad2ab588782df0286a7bea14061f0fe9894fc6250b494ffd6e294f1fc6d885c2a68ec73346b3ee2da590b9a1a782a0d64a5284b96042060826 WHIRLPOOL 3c34bf80893fd8c08fb6242448311886ac5fe0441d2caeedacc58c116530768683664a40b33a9949486e02509ce9f05cbf77a53f1c66697ba02fd9ebaa5746ff
-DIST simpson-source-3.1.0.tbz2 319863 SHA256 25778a6d8d2c426dac3e1a3a457f78ae4520e796e3482dd3aef0a93fc2f0a4e5 SHA512 69e1f4b783548f9162b272c09d60de3163f545d5cc52b77f49ca744f75378a3f39cef59b3daacd88404c434269dd61adebe7279aec8e97b9efb3c152f8f78f9c WHIRLPOOL 6f15a0e281e80e98f7404fe089e10734cb343dae96a839405d16a9406b1a365c27836c9adc4358688721288b6addef57111b8bb117aa95a75bc441d34d9a4821
-DIST simpson-source-3.1.2.tbz2 320780 SHA256 c2b42cf7abe0b6781d0c89f152c92965a7da769f7d3f49b8986648921b6c6934 SHA512 ecac4c346f10b5b02a5eee479e1d2f6151825e3b3e9f176ae3dbc0723ef4d8156ecec10cf1ad3d1aa27cdcc38687b0b3c64086c63303e60f3d54b5d5acb439cd WHIRLPOOL f4248f3f63a70faf7e74cbac8dded254c579548279a088443fb114f9018cbad7b540a2a9469cac0a38e071b050b180ef4ae04317e340523bac2babb6f0eb1836
diff --git a/sci-chemistry/simpson/files/3.0.1-gentoo.patch b/sci-chemistry/simpson/files/3.0.1-gentoo.patch
deleted file mode 100644
index 77c886d1c..000000000
--- a/sci-chemistry/simpson/files/3.0.1-gentoo.patch
+++ /dev/null
@@ -1,28 +0,0 @@
-diff --git a/Makefile b/Makefile
-index c5f6fcf..25e328f 100644
---- a/Makefile
-+++ b/Makefile
-@@ -7,8 +7,9 @@ C_OBJS = *.o
- #INCLUDES = -IC:/Tcl/include -I../CBLAS/src
- #LIBRARIES = -lm *.dll
- # LINUX:
--INCLUDES = -I/usr/include/tcl8.5
--LIBRARIES = -lm -lgslcblas -llapack -ltcl8.5
-+INCLUDES = -I@GENTOO_PORTAGE_EPREFIX@/usr/include/
-+BLASLIBS = `$(PKG_CONFIG) --libs cblas lapack`
-+LIBRARIES = -lm ${BLASLIBS} -ltcl
-
- FLAGS = -c -O3
- CC = gcc
-@@ -16,9 +17,9 @@ RM = rm
- TAR = tar
-
- simpson: $(C_OBJS)
-- $(CC) $(LIBRARIES) $(C_OBJS) -o simpson
-+ $(CC) $(LDFLAGS) -o simpson $(C_OBJS) $(LIBRARIES)
- $(C_OBJS):
-- $(CC) $(FLAGS) $(INCLUDES) *.c
-+ $(CC) $(CFLAGS) $(INCLUDES) -c *.c
- clean:
- $(RM) -f *.o simpson
- dist:
diff --git a/sci-chemistry/simpson/files/3.0.1-type.patch b/sci-chemistry/simpson/files/3.0.1-type.patch
deleted file mode 100644
index 3f6cc7023..000000000
--- a/sci-chemistry/simpson/files/3.0.1-type.patch
+++ /dev/null
@@ -1,110 +0,0 @@
-diff --git a/OCroutines.c b/OCroutines.c
-index eef6849..60ef56c 100644
---- a/OCroutines.c
-+++ b/OCroutines.c
-@@ -11,6 +11,7 @@
- #include "iodata.h"
- #include "tclutil.h"
- #include "B0inhom.h"
-+#include "defs_blas_lapack.h"
-
- /* global variable holding all OC parameters */
- OCoptPars OCpar;
-diff --git a/contour.c b/contour.c
-index ec5a223..87ae8ee 100644
---- a/contour.c
-+++ b/contour.c
-@@ -242,7 +242,8 @@ DEFINE_CMD(FContour)
- double lowcolor[3], highcolor[3], xmin, xmax, ymin, ymax;
- double *levels, x1, y1, x2, y2, cl, r1, r2, fmax;
- double *xpos, *ypos, **z, iratio, jratio, nlowcolor[3], nhighcolor[3];
-- char outputfile[256], **av;
-+ char outputfile[256];
-+ const char **av;
- FILE *file;
- FD *fdp;
- Point *p, **pp;
-diff --git a/ftools.c b/ftools.c
-index 682e475..3c150d6 100644
---- a/ftools.c
-+++ b/ftools.c
-@@ -1434,7 +1434,8 @@ int tclFRms(ClientData data,Tcl_Interp* interp,int argc, char *argv[])
- double2 *vec,*vec2;
- double v1,v2;
- int part;
-- char **par,**par2,*range;
-+ char *range;
-+ const char **par,**par2;
- int i,i1,i2,npar,npar2;
- double sumrms,sumint;
-
-diff --git a/ham.c b/ham.c
-index 5be9dd1..5d36bdc 100644
---- a/ham.c
-+++ b/ham.c
-@@ -34,6 +34,7 @@
- #include "cm_new.h"
- #include "ham.h"
- #include "defs.h"
-+#include "defs_blas_lapack.h"
-
- /*
- Allocation strategy:
-diff --git a/matrix_new.c b/matrix_new.c
-index c0aaad2..2f3f370 100644
---- a/matrix_new.c
-+++ b/matrix_new.c
-@@ -24,6 +24,7 @@
-
- #include <stdlib.h>
- #include <stdio.h>
-+#include <string.h>
- #include "complx.h"
- #include "matrix_new.h"
-
-diff --git a/new_direct.c b/new_direct.c
-index 24502f2..cc5fd68 100644
---- a/new_direct.c
-+++ b/new_direct.c
-@@ -1,4 +1,5 @@
- #include "new_direct.h"
-+#include "defs_blas_lapack.h"
-
- /* make visible global variable pulse */
- extern Pulse* puls;
-diff --git a/pulse.c b/pulse.c
-index f40787c..335d225 100644
---- a/pulse.c
-+++ b/pulse.c
-@@ -43,6 +43,7 @@
- #include "OCroutines.h"
- #include "B0inhom.h"
- #include "relax.h"
-+#include "defs_blas_lapack.h"
-
- /*
- tpropstart_usec : the time when the propagator was reset last time
-diff --git a/wigner.c b/wigner.c
-index bacf4b8..1644aaf 100644
---- a/wigner.c
-+++ b/wigner.c
-@@ -27,6 +27,7 @@
- #include <math.h>
- #include "complx.h"
- #include <stdio.h>
-+#include <stdlib.h>
- #include "defs.h"
- #include "matrix_new.h"
- //#include "defs_blas_lapack.h"
-diff --git a/zte.c b/zte.c
-index 77dcb87..6025fa4 100644
---- a/zte.c
-+++ b/zte.c
-@@ -2,6 +2,7 @@
- #include <stdlib.h>
- #include "cm_new.h"
- #include "pulse.h"
-+#include "tclutil.h"
-
- typedef struct _ZTEstruct {
- mv_complx *rho0, *sigma;
diff --git a/sci-chemistry/simpson/files/3.1.0-gentoo.patch b/sci-chemistry/simpson/files/3.1.0-gentoo.patch
deleted file mode 100644
index 7675d7905..000000000
--- a/sci-chemistry/simpson/files/3.1.0-gentoo.patch
+++ /dev/null
@@ -1,32 +0,0 @@
- Makefile | 10 +++++-----
- 1 files changed, 5 insertions(+), 5 deletions(-)
-
-diff --git a/Makefile b/Makefile
-index 7206ba5..832e76a 100644
---- a/Makefile
-+++ b/Makefile
-@@ -11,9 +11,9 @@ BINDIR = /usr/bin
- #LIBRARIES = -lm *.dll
-
- # Linux
--#INCLUDES = -I/usr/include/tcl8.4
--#LIBRARIES = -lm -llapack -lblas -ltcl8.4
--#BINDIR = /usr/local/bin
-+INCLUDES = -I@GENTOO_PORTAGE_EPREFIX@/usr/include/
-+BLASLIBS = `$(PKG_CONFIG) --libs cblas lapack`
-+LIBRARIES = -lm ${BLASLIBS} -ltcl
-
- # Linux MPI
- #INCLUDES = -I/usr/include/tcl8.4 -I/com/intel/mkl/10.1.1.019/include/
-@@ -38,9 +38,9 @@ TAR = tar
- MKDIR = mkdir
-
- simpson: $(OBJ)
-- $(CC) $(LIBRARIES) $(OBJ) -o simpson
-+ $(CC) $(LDFLAGS) -o $@ $(OBJ) $(LIBRARIES)
- .c.o:
-- $(CC) $(FLAGS) $(EXTRA_FLAGS) $(INCLUDES) -DVERSION=\"$(VERSION)\" $<
-+ $(CC) $(CFLAGS) $(EXTRA_FLAGS) $(INCLUDES) -DVERSION=\"$(VERSION)\" -c $<
- clean:
- $(RM) -f *.o simpson
- dist:
diff --git a/sci-chemistry/simpson/files/3.1.2-gentoo.patch b/sci-chemistry/simpson/files/3.1.2-gentoo.patch
deleted file mode 100644
index d81daeae8..000000000
--- a/sci-chemistry/simpson/files/3.1.2-gentoo.patch
+++ /dev/null
@@ -1,114 +0,0 @@
- Makefile | 106 +++++++++++++++++++++++++++++++-------------------------------
- 1 files changed, 53 insertions(+), 53 deletions(-)
-
-diff --git a/Makefile b/Makefile
-index 216955d..ba54573 100644
---- a/Makefile
-+++ b/Makefile
-@@ -1,53 +1,53 @@
--VERSION = 3.1.2
--
--# Mac OS X
--INCLUDES = -I/usr/include/tcl8.5
--LIBRARIES = -lm -framework Accelerate -framework Tcl
--EXTRA_FLAGS = -DNO_CONST
--BINDIR = /usr/bin
--
--# Windows
--#INCLUDES = -IC:/Tcl/include -I../CBLAS/src
--#LIBRARIES = -lm *.dll
--
--# Linux (Ubuntu 10.?)
--#INCLUDES = -I/usr/include/tcl8.4
--#LIBRARIES = -lm -llapack -lblas -ltcl8.4
--#BINDIR = /usr/local/bin
--
--# Linux MPI
--#INCLUDES = -I/usr/include/tcl8.4 -I/com/intel/mkl/10.1.1.019/include/
--#LIBRARIES = -L/com/intel/mkl/10.1.1.019/lib/em64t -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -lmkl_lapack -liomp5 -ltcl8.4 -lm
--#CC = mpicc
--#EXTRA_FLAGS = -DMKL_INTEL -DMPI
--
--SRC = B0inhom.c crystdat.c gd.c iodata.c relax.c spinsys.c \
--OCroutines.c csa.c gdfontg.c isotopes.c restrict.c tclcode.c \
--cm_new.c csastat.c gdfontl.c main.c rfprof.c tclutil.c \
--cmblock.c fft.c gdfontmb.c matrix_new.c rfshapes.c wigner.c \
--complx.c fidcalc.c gdfonts.c new_direct.c sim.c zte.c \
--contour.c fit.c gdfontt.c pulse.c simplex.c \
--cryst.c ftools.c ham.c readsys.c simpson.c
--OBJ = $(SRC:.c=.o)
--CC = gcc
--STRIP = strip
--CP = cp
--FLAGS = -c -O3
--RM = rm
--TAR = tar
--MKDIR = mkdir
--
--simpson: $(OBJ)
-- $(CC) $(LIBRARIES) $(OBJ) -o simpson
--.c.o:
-- $(CC) $(FLAGS) $(EXTRA_FLAGS) $(INCLUDES) -DVERSION=\"$(VERSION)\" $<
--clean:
-- $(RM) -f *.o simpson
--dist:
-- $(MKDIR) simpson-source-$(VERSION)
-- $(CP) -r *.c *.h simpson.xcodeproj Makefile simpson-source-$(VERSION)
-- $(TAR) cvjf simpson-source-$(VERSION).tbz2 simpson-source-$(VERSION)
-- $(RM) -fr simpson-source-$(VERSION)
--install:
-- $(STRIP) simpson
-- $(CP) simpson $(BINDIR)
-+VERSION = 3.1.2
-+
-+# Mac OS X
-+INCLUDES = -I/usr/include/tcl8.5
-+LIBRARIES = -lm -framework Accelerate -framework Tcl
-+EXTRA_FLAGS = -DNO_CONST
-+BINDIR = /usr/bin
-+
-+# Windows
-+#INCLUDES = -IC:/Tcl/include -I../CBLAS/src
-+#LIBRARIES = -lm *.dll
-+
-+# Linux
-+INCLUDES = -I@GENTOO_PORTAGE_EPREFIX@/usr/include/
-+BLASLIBS = `$(PKG_CONFIG) --libs cblas lapack`
-+LIBRARIES = -lm ${BLASLIBS} -ltcl
-+
-+# Linux MPI
-+#INCLUDES = -I/usr/include/tcl8.4 -I/com/intel/mkl/10.1.1.019/include/
-+#LIBRARIES = -L/com/intel/mkl/10.1.1.019/lib/em64t -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -lmkl_lapack -liomp5 -ltcl8.4 -lm
-+#CC = mpicc
-+#EXTRA_FLAGS = -DMKL_INTEL -DMPI
-+
-+SRC = B0inhom.c crystdat.c gd.c iodata.c relax.c spinsys.c \
-+OCroutines.c csa.c gdfontg.c isotopes.c restrict.c tclcode.c \
-+cm_new.c csastat.c gdfontl.c main.c rfprof.c tclutil.c \
-+cmblock.c fft.c gdfontmb.c matrix_new.c rfshapes.c wigner.c \
-+complx.c fidcalc.c gdfonts.c new_direct.c sim.c zte.c \
-+contour.c fit.c gdfontt.c pulse.c simplex.c \
-+cryst.c ftools.c ham.c readsys.c simpson.c
-+OBJ = $(SRC:.c=.o)
-+CC = gcc
-+STRIP = strip
-+CP = cp
-+FLAGS = -c -O3
-+RM = rm
-+TAR = tar
-+MKDIR = mkdir
-+
-+simpson: $(OBJ)
-+ $(CC) $(LDFLAGS) -o $@ $(OBJ) $(LIBRARIES)
-+.c.o:
-+ $(CC) $(CFLAGS) $(EXTRA_FLAGS) $(INCLUDES) -DVERSION=\"$(VERSION)\" -c $<
-+clean:
-+ $(RM) -f *.o simpson
-+dist:
-+ $(MKDIR) simpson-source-$(VERSION)
-+ $(CP) -r *.c *.h simpson.xcodeproj Makefile simpson-source-$(VERSION)
-+ $(TAR) cvjf simpson-source-$(VERSION).tbz2 simpson-source-$(VERSION)
-+ $(RM) -fr simpson-source-$(VERSION)
-+install:
-+ $(STRIP) simpson
-+ $(CP) simpson $(BINDIR)
diff --git a/sci-chemistry/simpson/metadata.xml b/sci-chemistry/simpson/metadata.xml
deleted file mode 100644
index 8937bad0b..000000000
--- a/sci-chemistry/simpson/metadata.xml
+++ /dev/null
@@ -1,8 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="project">
- <email>sci-chemistry@gentoo.org</email>
- <name>Gentoo Chemistry Project</name>
- </maintainer>
-</pkgmetadata>
diff --git a/sci-chemistry/simpson/simpson-3.0.1.ebuild b/sci-chemistry/simpson/simpson-3.0.1.ebuild
deleted file mode 100644
index 9fa692637..000000000
--- a/sci-chemistry/simpson/simpson-3.0.1.ebuild
+++ /dev/null
@@ -1,47 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-inherit eutils prefix toolchain-funcs
-
-DESCRIPTION="General-purpose software package for simulation virtually all kinds of solid-state NMR experiments"
-HOMEPAGE="http://bionmr.chem.au.dk/bionmr/software/index.php"
-SRC_URI="http://www.bionmr.chem.au.dk/download/${PN}/3.0/${PN}-source-${PV}.tgz"
-
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux"
-LICENSE="GPL-2"
-IUSE="gtk threads tk"
-
-RDEPEND="
- dev-libs/libf2c
- virtual/blas
- virtual/cblas
- virtual/lapack
- gtk? ( x11-libs/gtk+:1 )
- tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
- virtual/pkgconfig"
-
-S="${WORKDIR}"/${PN}-source-${PV}
-
-src_prepare() {
- tc-export PKG_CONFIG
- edos2unix Makefile
- epatch \
- "${FILESDIR}"/${PV}-gentoo.patch \
- "${FILESDIR}"/${PV}-type.patch
- eprefixify Makefile
-}
-
-src_compile() {
- emake \
- CC="$(tc-getCC)" \
- CFLAGS="${CFLAGS}"
-}
-
-src_install() {
- dobin ${PN}
-}
diff --git a/sci-chemistry/simpson/simpson-3.1.0.ebuild b/sci-chemistry/simpson/simpson-3.1.0.ebuild
deleted file mode 100644
index 520ce7d48..000000000
--- a/sci-chemistry/simpson/simpson-3.1.0.ebuild
+++ /dev/null
@@ -1,47 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-inherit eutils prefix toolchain-funcs
-
-DESCRIPTION="General-purpose software package for simulation virtually all kinds of solid-state NMR experiments"
-HOMEPAGE="http://bionmr.chem.au.dk/bionmr/software/index.php"
-SRC_URI="http://www.bionmr.chem.au.dk/download/${PN}/3.1/${PN}-source-${PV}.tbz2"
-
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux"
-LICENSE="GPL-2"
-IUSE="gtk threads tk"
-
-RDEPEND="
- dev-libs/libf2c
- virtual/blas
- virtual/cblas
- virtual/lapack
- gtk? ( x11-libs/gtk+:1 )
- tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
- virtual/pkgconfig"
-
-S="${WORKDIR}"/${PN}-source-${PV}
-
-src_prepare() {
- tc-export PKG_CONFIG
- edos2unix Makefile
- epatch \
- "${FILESDIR}"/${PV}-gentoo.patch \
- "${FILESDIR}"/3.0.1-type.patch
- eprefixify Makefile
-}
-
-src_compile() {
- emake \
- CC="$(tc-getCC)" \
- CFLAGS="${CFLAGS}"
-}
-
-src_install() {
- dobin ${PN}
-}
diff --git a/sci-chemistry/simpson/simpson-3.1.2.ebuild b/sci-chemistry/simpson/simpson-3.1.2.ebuild
deleted file mode 100644
index 520ce7d48..000000000
--- a/sci-chemistry/simpson/simpson-3.1.2.ebuild
+++ /dev/null
@@ -1,47 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-inherit eutils prefix toolchain-funcs
-
-DESCRIPTION="General-purpose software package for simulation virtually all kinds of solid-state NMR experiments"
-HOMEPAGE="http://bionmr.chem.au.dk/bionmr/software/index.php"
-SRC_URI="http://www.bionmr.chem.au.dk/download/${PN}/3.1/${PN}-source-${PV}.tbz2"
-
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux"
-LICENSE="GPL-2"
-IUSE="gtk threads tk"
-
-RDEPEND="
- dev-libs/libf2c
- virtual/blas
- virtual/cblas
- virtual/lapack
- gtk? ( x11-libs/gtk+:1 )
- tk? ( dev-lang/tk:0= )"
-DEPEND="${RDEPEND}
- virtual/pkgconfig"
-
-S="${WORKDIR}"/${PN}-source-${PV}
-
-src_prepare() {
- tc-export PKG_CONFIG
- edos2unix Makefile
- epatch \
- "${FILESDIR}"/${PV}-gentoo.patch \
- "${FILESDIR}"/3.0.1-type.patch
- eprefixify Makefile
-}
-
-src_compile() {
- emake \
- CC="$(tc-getCC)" \
- CFLAGS="${CFLAGS}"
-}
-
-src_install() {
- dobin ${PN}
-}