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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2016-07-12 17:53:53 +0200 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2016-07-12 17:53:53 +0200 |
| commit | 091fd4549ad2edd83419e0f645cc902a2f71ae23 (patch) | |
| tree | 2af93f3845ea3d06015922cdb1ffd9c4223b01b5 /dev-java | |
| parent | sci-biology/wgs_tools: add taxonomy-related info to NCBI SRA and BLAST+ (diff) | |
| download | sci-091fd4549ad2edd83419e0f645cc902a2f71ae23.tar.gz sci-091fd4549ad2edd83419e0f645cc902a2f71ae23.tar.bz2 sci-091fd4549ad2edd83419e0f645cc902a2f71ae23.zip | |
dev-java/htsjdk: version bump, moved from ant to gradle, SANDBOX VIOLATION
Package-Manager: portage-2.2.28
Diffstat (limited to 'dev-java')
| -rw-r--r-- | dev-java/htsjdk/Manifest | 2 | ||||
| -rw-r--r-- | dev-java/htsjdk/htsjdk-2.5.1.ebuild (renamed from dev-java/htsjdk/htsjdk-2.2.2.ebuild) | 9 |
2 files changed, 7 insertions, 4 deletions
diff --git a/dev-java/htsjdk/Manifest b/dev-java/htsjdk/Manifest index 896f512f7..a2b7a9c5d 100644 --- a/dev-java/htsjdk/Manifest +++ b/dev-java/htsjdk/Manifest @@ -1 +1 @@ -DIST htsjdk-2.2.2.tar.gz 11459641 SHA256 5ef1b1e6b1fcdb7f13952b61de3b2af581ba800e4f6ea37762fbbd6d4e3f6904 SHA512 69c4f6be9be16669fbbbcac2e668b564c09793763908b1c4703b760ea46fdbcf747d233f87c48888de3810379b02f2e0d8ebef4d1bf48215128e02cb4053bd10 WHIRLPOOL 023f922b8a9f04c5c995bd862576b8eb19fc97357843e1709ce2b54d9b51dd666b9e7a93e5e934dfef228840d78ea09e9dd68294f8f07d29ef9937b023ed8f73 +DIST htsjdk-2.5.1.tar.gz 9121664 SHA256 78ab25ba4c540805261faf6c7f2ae57755c26f654b93da6d41dc6ff21d59dc00 SHA512 6bc67deb28556664a018dd72a89f7c84f534262dc7f18072d4e1f4bdfc51298d8aeb7086a9d2764d92c44c69844577a9b9a005b00e13fc35f2bd240bde7a347f WHIRLPOOL e5da7f92e4be3271aa1387faaf6966b212a1fbe82d8dc3cea3115f75df9c8188323bb9402b8d34e58191e13b01411d6e529a78687d1f4b963cd239f4512ec88e diff --git a/dev-java/htsjdk/htsjdk-2.2.2.ebuild b/dev-java/htsjdk/htsjdk-2.5.1.ebuild index ca2cdd9cf..b63c0d23f 100644 --- a/dev-java/htsjdk/htsjdk-2.2.2.ebuild +++ b/dev-java/htsjdk/htsjdk-2.5.1.ebuild @@ -15,7 +15,7 @@ SRC_URI="https://github.com/samtools/htsjdk/archive/${PV}.tar.gz -> ${P}.tar.gz" LICENSE="MIT" SLOT="0" IUSE="" -KEYWORDS="~amd64 ~x86" +KEYWORDS="" # SANDBOX VIOLATION CDEPEND="dev-java/commons-jexl:2 dev-java/commons-compress:0 @@ -31,9 +31,12 @@ EANT_NEEDS_TOOLS="true" JAVA_ANT_REWRITE_CLASSPATH="true" EANT_GENTOO_CLASSPATH="commons-jexl-2,commons-compress,commons-logging" -java_prepare() { +java_prepare(){ default - rm -v lib/{commons-compress,commons-jexl,commons-logging}*.jar || die +} + +src_compile(){ + ./gradlew build || die } src_install() { |