diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2017-11-18 20:39:44 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2017-11-18 20:39:44 +0000 |
| commit | bce61aa3e4fe85fe411df858eb30ebe72a3a8f88 (patch) | |
| tree | b1c9615114a61663dd20c38cda7bb4b0a04ec6cd | |
| parent | sci-biology/bismark: Fix repoman warnings (diff) | |
| download | sci-bce61aa3e4fe85fe411df858eb30ebe72a3a8f88.tar.gz sci-bce61aa3e4fe85fe411df858eb30ebe72a3a8f88.tar.bz2 sci-bce61aa3e4fe85fe411df858eb30ebe72a3a8f88.zip | |
Consistently ident with tabs
Signed-off-by: Justin Lecher <jlec@gentoo.org>
830 files changed, 6711 insertions, 6712 deletions
diff --git a/app-admin/eselect/metadata.xml b/app-admin/eselect/metadata.xml index d3c30b4c1..8c8d15633 100644 --- a/app-admin/eselect/metadata.xml +++ b/app-admin/eselect/metadata.xml @@ -1,7 +1,7 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bicatali@gentoo.org</email> - </maintainer> + <maintainer type="person"> + <email>bicatali@gentoo.org</email> + </maintainer> </pkgmetadata> diff --git a/app-benchmarks/btl/metadata.xml b/app-benchmarks/btl/metadata.xml index 0e64e0503..8ebdfe5fd 100644 --- a/app-benchmarks/btl/metadata.xml +++ b/app-benchmarks/btl/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>andyspiros@gmail.com</email> - <name>Andrea Arteaga</name> - <description>Bench Template Library</description> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription>This package contains a modified copy of the BTL.</longdescription> - <upstream> - <remote-id type="bitbucket">spiros/btl</remote-id> - </upstream> + <maintainer type="person"> + <email>andyspiros@gmail.com</email> + <name>Andrea Arteaga</name> + <description>Bench Template Library</description> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>This package contains a modified copy of the BTL.</longdescription> + <upstream> + <remote-id type="bitbucket">spiros/btl</remote-id> + </upstream> </pkgmetadata> diff --git a/app-benchmarks/numbench/metadata.xml b/app-benchmarks/numbench/metadata.xml index 91ead3a68..9851d9f74 100644 --- a/app-benchmarks/numbench/metadata.xml +++ b/app-benchmarks/numbench/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>andyspiros@gmail.com</email> - <name>Andrea Arteaga</name> - <description>Google Summer of Code 2011 student</description> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription>This package contains a set of scripts developed during the Google Summer of Code 2011 project. It aims to benchmark numerical libraries, and more precisely implementations of the standard BLAS, CBLAS, LAPACK, PBLAS, ScaLAPACK and the library FFTW.</longdescription> - <upstream> - <remote-id type="github">andyspiros/numbench</remote-id> - </upstream> + <maintainer type="person"> + <email>andyspiros@gmail.com</email> + <name>Andrea Arteaga</name> + <description>Google Summer of Code 2011 student</description> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>This package contains a set of scripts developed during the Google Summer of Code 2011 project. It aims to benchmark numerical libraries, and more precisely implementations of the standard BLAS, CBLAS, LAPACK, PBLAS, ScaLAPACK and the library FFTW.</longdescription> + <upstream> + <remote-id type="github">andyspiros/numbench</remote-id> + </upstream> </pkgmetadata> diff --git a/app-doc/blacs-docs/metadata.xml b/app-doc/blacs-docs/metadata.xml index 49201a4d4..b479760c1 100644 --- a/app-doc/blacs-docs/metadata.xml +++ b/app-doc/blacs-docs/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The BLACS (Basic Linear Algebra Communication Subprograms) project is an ongoing investigation whose purpose is to create a linear algebra oriented message passing interface that may be implemented diff --git a/app-doc/blas-docs/metadata.xml b/app-doc/blas-docs/metadata.xml index a7f7415dc..636c418b6 100644 --- a/app-doc/blas-docs/metadata.xml +++ b/app-doc/blas-docs/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> BLAS (Basic Linear Algebra Subroutines) is a set of efficient routines for most of the basic vector and matrix operations. They are widely used as the basis for other high quality linear algebra software, for diff --git a/app-doc/root-docs/metadata.xml b/app-doc/root-docs/metadata.xml index 27aa72d21..117b7b34c 100644 --- a/app-doc/root-docs/metadata.xml +++ b/app-doc/root-docs/metadata.xml @@ -1,22 +1,22 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bircoph@gentoo.org</email> - <name>Andrew Savchenko</name> - </maintainer> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>bircoph@gentoo.org</email> + <name>Andrew Savchenko</name> + </maintainer> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> This package contains the automatically generated ROOT class documentation. </longdescription> - <use> - <flag name="api">Generate html API documentation</flag> - <flag name="http">Build HttpServer documentation</flag> - <flag name="math">Provide all math related documentation</flag> - <flag name="metric">Default to A4 paper size and metric measurement. Letter will be used otherwise</flag> - </use> + <use> + <flag name="api">Generate html API documentation</flag> + <flag name="http">Build HttpServer documentation</flag> + <flag name="math">Provide all math related documentation</flag> + <flag name="metric">Default to A4 paper size and metric measurement. Letter will be used otherwise</flag> + </use> </pkgmetadata> diff --git a/app-forensics/vine/metadata.xml b/app-forensics/vine/metadata.xml index cabecde27..9dee8db11 100644 --- a/app-forensics/vine/metadata.xml +++ b/app-forensics/vine/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>ottxor@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> + <maintainer type="person"> + <email>ottxor@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> </pkgmetadata> diff --git a/app-portage/g-octave/metadata.xml b/app-portage/g-octave/metadata.xml index d8ba483ee..0f04e0b21 100644 --- a/app-portage/g-octave/metadata.xml +++ b/app-portage/g-octave/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>rafael@rafaelmartins.eng.br</email> - <name>Rafael Goncalves Martins</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>rafael@rafaelmartins.eng.br</email> + <name>Rafael Goncalves Martins</name> + </maintainer> + <longdescription lang="en"> g-octave is a tool that generates and installs ebuilds for Octave-Forge packages "on-the-fly" to Gentoo Linux, using Portage. It's capable to generate ebuilds and Manifest files for the packages, and to install diff --git a/app-vim/vim-gromacs/metadata.xml b/app-vim/vim-gromacs/metadata.xml index 4a5c9ab9d..b0b58dd8d 100644 --- a/app-vim/vim-gromacs/metadata.xml +++ b/app-vim/vim-gromacs/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription lang="en"> VIM syntax plugin which provides syntax highlighting for the gromacs files. </longdescription> - <upstream> - <remote-id type="github">HubLot/vim-gromacs</remote-id> - </upstream> + <upstream> + <remote-id type="github">HubLot/vim-gromacs</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-cpp/eigen/metadata.xml b/dev-cpp/eigen/metadata.xml index 6d5cb6666..b4b6e1b4d 100644 --- a/dev-cpp/eigen/metadata.xml +++ b/dev-cpp/eigen/metadata.xml @@ -1,34 +1,34 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Eigen is a lightweight C++ template library for vector and matrix math, a.k.a. linear algebra. Unlike most other linear algebra libraries, Eigen focuses on the simple mathematical needs of applications: games and other OpenGL apps, spreadsheets and other office apps, etc. Eigen is dedicated to providing optimal speed with GCC. </longdescription> - <use> - <flag name="adolc"> + <use> + <flag name="adolc"> Enable automatic differentiation using <pkg>sci-libs/adolc</pkg> </flag> - <flag name="metis"> + <flag name="metis"> Enable matrix partitioning using <pkg>sci-libs/metis</pkg></flag> - <flag name="mkl"> + <flag name="mkl"> Use propertary intel blas/lapack implementation through <pkg>sci-libs/mkl</pkg> </flag> - <flag name="pastix"> + <flag name="pastix"> Enable large scale direct solver with using <pkg>sci-libs/pastix</pkg> </flag> - <flag name="sparse"> + <flag name="sparse"> Enable use for extra sparse matrix with <pkg>sci-libs/umfpack</pkg>, <pkg>sci-libs/cholmod</pkg>, <pkg>sci-libs/superlu</pkg> and <pkg>dev-cpp/sparsehash</pkg> </flag> - </use> - <upstream> - <remote-id type="bitbucket">eigen/eigen</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="bitbucket">eigen/eigen</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-cpp/growler-arch/metadata.xml b/dev-cpp/growler-arch/metadata.xml index 6ddf36355..56f547ec6 100644 --- a/dev-cpp/growler-arch/metadata.xml +++ b/dev-cpp/growler-arch/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription>Growler-Arch is the set growler libraries and utilities that provide a distributed object architecture and environment.</longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription>Growler-Arch is the set growler libraries and utilities that provide a distributed object architecture and environment.</longdescription> </pkgmetadata> diff --git a/dev-cpp/growler-core/metadata.xml b/dev-cpp/growler-core/metadata.xml index d3ff5e92a..b33ec1a13 100644 --- a/dev-cpp/growler-core/metadata.xml +++ b/dev-cpp/growler-core/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription> Growler-Core provides a large set of mainly general-purpose classes and functionality for developing and using the Growler Distributed Component Architecture. diff --git a/dev-cpp/growler-link/metadata.xml b/dev-cpp/growler-link/metadata.xml index b436d6bce..64aa8eb6a 100644 --- a/dev-cpp/growler-link/metadata.xml +++ b/dev-cpp/growler-link/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription> Growler-Link is the lowest-level Growler package. It provides basic support for dynamic linking, components and modules, as well as several other of Growler's commonly used API's, such as Clogger. diff --git a/dev-cpp/growler-math/metadata.xml b/dev-cpp/growler-math/metadata.xml index 4f4b88027..d284223c7 100644 --- a/dev-cpp/growler-math/metadata.xml +++ b/dev-cpp/growler-math/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription>Growler-Math provides a set of math-related classes and functionality</longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription>Growler-Math provides a set of math-related classes and functionality</longdescription> </pkgmetadata> diff --git a/dev-cpp/growler-thread/metadata.xml b/dev-cpp/growler-thread/metadata.xml index 13e10be3d..5800a84ea 100644 --- a/dev-cpp/growler-thread/metadata.xml +++ b/dev-cpp/growler-thread/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription> Growler-Thread is a pthread wrapper library used by Growler. It provides support for creating threads, and for common multithreading tasks </longdescription> diff --git a/dev-cpp/growler/metadata.xml b/dev-cpp/growler/metadata.xml index ebad0883d..7fd7dac50 100644 --- a/dev-cpp/growler/metadata.xml +++ b/dev-cpp/growler/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bryan.d.green@nasa.gov</email> - <name>Bryan Green</name> - </maintainer> - <longdescription>Growler is a C++-based distributed object and event architecture.</longdescription> + <maintainer type="person"> + <email>bryan.d.green@nasa.gov</email> + <name>Bryan Green</name> + </maintainer> + <longdescription>Growler is a C++-based distributed object and event architecture.</longdescription> </pkgmetadata> diff --git a/dev-cpp/icnc/metadata.xml b/dev-cpp/icnc/metadata.xml index 1b36049c6..9dee8db11 100644 --- a/dev-cpp/icnc/metadata.xml +++ b/dev-cpp/icnc/metadata.xml @@ -1,8 +1,8 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>ottxor@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> + <maintainer type="person"> + <email>ottxor@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> </pkgmetadata> diff --git a/dev-java/fits/metadata.xml b/dev-java/fits/metadata.xml index aab84e6a7..0b1cc63ad 100644 --- a/dev-java/fits/metadata.xml +++ b/dev-java/fits/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Java library which provides I/O for FITS images and binary tables. The Java libraries support all basic FITS formats and gzip compressed files. Support for access to data subsets is included and the diff --git a/dev-java/flexdock/metadata.xml b/dev-java/flexdock/metadata.xml index f864524db..6d57dc37c 100644 --- a/dev-java/flexdock/metadata.xml +++ b/dev-java/flexdock/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Java docking framework for use in cross-platform Swing applications. </longdescription> </pkgmetadata> diff --git a/dev-java/gluegen/metadata.xml b/dev-java/gluegen/metadata.xml index fa1706ad0..df54bab01 100644 --- a/dev-java/gluegen/metadata.xml +++ b/dev-java/gluegen/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> GlueGen is a tool which automatically generates the Java and JNI code necessary to call C libraries. It reads as input ANSI C header files and separate configuration files which provide control over many aspects of the glue code @@ -16,7 +16,7 @@ on the IR before glue code emission. GlueGen is currently powerful enough to bind even low-level APIs such as the Java Native Interface (JNI) and the AWT Native Interface (JAWT) back up to the Java programming language. </longdescription> - <upstream> - <remote-id type="github">sgothel/gluegen</remote-id> - </upstream> + <upstream> + <remote-id type="github">sgothel/gluegen</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-java/hdf-java/metadata.xml b/dev-java/hdf-java/metadata.xml index 16cedf505..531e47258 100644 --- a/dev-java/hdf-java/metadata.xml +++ b/dev-java/hdf-java/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> HDF is a versatile data model that can represent very complex data objects and a wide variety of metadata. It is a completely portable file format with no limit on the number or size of data objects in @@ -13,8 +13,8 @@ This Java package implements HDF4/HDF5 data objects in an object-oriented form. It provides a common Java API for accessing HDF files. </longdescription> - <use> - <flag name="hdf">Add support for the Hierarchical Data Format v.4 (<pkg>sci-libs/hdf</pkg>)</flag> - <flag name="hdfview">Build a GUI viewer for all files supported in <pkg>dev-java/hdf-java</pkg></flag> - </use> + <use> + <flag name="hdf">Add support for the Hierarchical Data Format v.4 (<pkg>sci-libs/hdf</pkg>)</flag> + <flag name="hdfview">Build a GUI viewer for all files supported in <pkg>dev-java/hdf-java</pkg></flag> + </use> </pkgmetadata> diff --git a/dev-java/htsjdk/metadata.xml b/dev-java/htsjdk/metadata.xml index feb7e6155..e18a4898a 100644 --- a/dev-java/htsjdk/metadata.xml +++ b/dev-java/htsjdk/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-java/jeuclid-core/metadata.xml b/dev-java/jeuclid-core/metadata.xml index 5e72e0411..78b3a367d 100644 --- a/dev-java/jeuclid-core/metadata.xml +++ b/dev-java/jeuclid-core/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> JEuclid is a complete MathML rendering solution, consisting of: * A MathViewer application * Command line converters from MathML to other formats @@ -15,7 +15,7 @@ This package contains the basic JEuclid rendering and document handling classes. </longdescription> - <upstream> - <remote-id type="sourceforge">jeuclid</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">jeuclid</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-java/jgraphx/metadata.xml b/dev-java/jgraphx/metadata.xml index ffe33e8c0..49aa77f7c 100644 --- a/dev-java/jgraphx/metadata.xml +++ b/dev-java/jgraphx/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> JGraph X is based on the mxGraph architecture, a re-designed core based on JGraph experience. Overall, JGraph X provides more features that JGraph, with a far diff --git a/dev-java/jlatexmath-fop/metadata.xml b/dev-java/jlatexmath-fop/metadata.xml index a5ee94095..cc9ca869b 100644 --- a/dev-java/jlatexmath-fop/metadata.xml +++ b/dev-java/jlatexmath-fop/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> LaTeXmath library provides a set of Java classes for displaying (complex) mathematical formulas as part of a Java application with LateX style. This package installs the plugin for dev-java/fop. diff --git a/dev-java/jlatexmath/metadata.xml b/dev-java/jlatexmath/metadata.xml index e2085e4c5..62952f06f 100644 --- a/dev-java/jlatexmath/metadata.xml +++ b/dev-java/jlatexmath/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> LaTeXmath library provides a set of Java classes for displaying (complex) mathematical formulas as part of a Java application with LateX style. diff --git a/dev-java/jogl/metadata.xml b/dev-java/jogl/metadata.xml index 88a073443..7a5a6ccdd 100644 --- a/dev-java/jogl/metadata.xml +++ b/dev-java/jogl/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> JOGL provides Java with a Binding for the OpenGL® API (JSR-231), and is designed to provide hardware-supported 3D graphics to applications written in Java. </longdescription> - <use> - <flag name="cg">Enable NVidia Cg binding.</flag> - </use> - <upstream> - <remote-id type="github">sgothel/jogl</remote-id> - </upstream> + <use> + <flag name="cg">Enable NVidia Cg binding.</flag> + </use> + <upstream> + <remote-id type="github">sgothel/jogl</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-java/netcdf/metadata.xml b/dev-java/netcdf/metadata.xml index 540e5d70e..c49e4ad8f 100644 --- a/dev-java/netcdf/metadata.xml +++ b/dev-java/netcdf/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The NetCDF-Java Library is a Java interface to NetCDF files, as well as to many other types of scientific data formats. </longdescription> diff --git a/dev-lang/berkeley_upc/metadata.xml b/dev-lang/berkeley_upc/metadata.xml index 1ebc1d2a3..c4275da80 100644 --- a/dev-lang/berkeley_upc/metadata.xml +++ b/dev-lang/berkeley_upc/metadata.xml @@ -1,25 +1,25 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jauhien@gentoo.org</email> - <name>Jauhien Piatlicki</name> - </maintainer> - <use> - <flag name="mpi-compat">Enable interoperability with MPI</flag> - <flag name="pshm">Build UPC Runtime/GASNet with Process-SHared Memory enabled</flag> - <flag name="segment-fast"> + <maintainer type="person"> + <email>jauhien@gentoo.org</email> + <name>Jauhien Piatlicki</name> + </maintainer> + <use> + <flag name="mpi-compat">Enable interoperability with MPI</flag> + <flag name="pshm">Build UPC Runtime/GASNet with Process-SHared Memory enabled</flag> + <flag name="segment-fast"> Select GASNet's FAST segments (default), for the fastest remote access with a possible cost in max shared memory size </flag> - <flag name="segment-large"> + <flag name="segment-large"> Select GASNet's LARGE segments, for the largest possible shared memory size, at a possible cost in remote access time </flag> - <flag name="single">Support running over smp loopback (no network)</flag> - <flag name="sptr-packed">Use the more efficient 'packed' shared pointer representation</flag> - <flag name="sptr-struct">Use the 'struct' shared pointer representation</flag> - <flag name="sptr-symmetric">Enable 'symmetric' pointer variant where available (64-bit smp and shmem)</flag> - <flag name="udp">Support running over UDP</flag> - </use> + <flag name="single">Support running over smp loopback (no network)</flag> + <flag name="sptr-packed">Use the more efficient 'packed' shared pointer representation</flag> + <flag name="sptr-struct">Use the 'struct' shared pointer representation</flag> + <flag name="sptr-symmetric">Enable 'symmetric' pointer variant where available (64-bit smp and shmem)</flag> + <flag name="udp">Support running over UDP</flag> + </use> </pkgmetadata> diff --git a/dev-lang/berkeley_upc_translator/metadata.xml b/dev-lang/berkeley_upc_translator/metadata.xml index f7d539ea1..c8c5e0f03 100644 --- a/dev-lang/berkeley_upc_translator/metadata.xml +++ b/dev-lang/berkeley_upc_translator/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jauhien@gentoo.org</email> - <name>Jauhien Piatlicki</name> - </maintainer> + <maintainer type="person"> + <email>jauhien@gentoo.org</email> + <name>Jauhien Piatlicki</name> + </maintainer> </pkgmetadata> diff --git a/dev-lang/conceptual/metadata.xml b/dev-lang/conceptual/metadata.xml index 9766ecb5d..c73b3a9fa 100644 --- a/dev-lang/conceptual/metadata.xml +++ b/dev-lang/conceptual/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>ottxor@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> - <use> - <flag name="gui">Build the Java base graphical interface</flag> - </use> - <upstream> - <remote-id type="sourceforge">conceptual</remote-id> - </upstream> + <maintainer type="person"> + <email>ottxor@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> + <use> + <flag name="gui">Build the Java base graphical interface</flag> + </use> + <upstream> + <remote-id type="sourceforge">conceptual</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-lang/icc/metadata.xml b/dev-lang/icc/metadata.xml index 4a2545b28..7731f2960 100644 --- a/dev-lang/icc/metadata.xml +++ b/dev-lang/icc/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The Intel® C++ Compiler is a full featured C/C++ compiler for Intel based architectures. The compiler supports multi-threading, automatic processor dispatch, vectorization, auto-parallelization, OpenMP, data diff --git a/dev-lang/idb/metadata.xml b/dev-lang/idb/metadata.xml index af02a6866..8bb408f0d 100644 --- a/dev-lang/idb/metadata.xml +++ b/dev-lang/idb/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The Intel® Debugger is a command line debugger for Intel based architectures. It is well suited with the Intel C++ or Intel FORTRAN compilers. It also comes also with a graphical interface and extensive @@ -15,7 +15,7 @@ well. License, terms of qualifications can be found on the web site and follow the one received in the Intel compilers. </longdescription> - <use> - <flag name="eclipse">Install the <pkg>dev-util/eclipse-sdk</pkg> plugins</flag> - </use> + <use> + <flag name="eclipse">Install the <pkg>dev-util/eclipse-sdk</pkg> plugins</flag> + </use> </pkgmetadata> diff --git a/dev-lang/ifc/metadata.xml b/dev-lang/ifc/metadata.xml index 2dcae58a6..a2754dff2 100644 --- a/dev-lang/ifc/metadata.xml +++ b/dev-lang/ifc/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The Intel® Fortran Compiler is a full featured FORTRAN 77/95 and substantial FORTRAN 2003 compiler for Intel based architectures. The compiler supports multi-threading with automatic processor dispatch, diff --git a/dev-lang/path64/metadata.xml b/dev-lang/path64/metadata.xml index ee1012f9f..03dc1bf82 100644 --- a/dev-lang/path64/metadata.xml +++ b/dev-lang/path64/metadata.xml @@ -1,20 +1,20 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <longdescription> The PathScale EKOPath Compiler Suite offers programmers a rich set of tools and one of the world's most sophisticated optimization infrastructures to maximize program performance on any Intel 64 or AMD64 platform supporting Intel MMX, SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2, AMD SSE4A and AVX. </longdescription> - <use> - <flag name="debugger">Build PathDB debugger</flag> - <flag name="assembler">Build PathAS assembler</flag> - <flag name="native">Use EKOPath/Path64 for bootstraping</flag> - <flag name="valgrind">Support compiler debugging with <pkg>dev-util/valgrind</pkg></flag> - </use> + <use> + <flag name="debugger">Build PathDB debugger</flag> + <flag name="assembler">Build PathAS assembler</flag> + <flag name="native">Use EKOPath/Path64 for bootstraping</flag> + <flag name="valgrind">Support compiler debugging with <pkg>dev-util/valgrind</pkg></flag> + </use> </pkgmetadata> diff --git a/dev-lang/pgi/metadata.xml b/dev-lang/pgi/metadata.xml index 93c720670..785285df0 100644 --- a/dev-lang/pgi/metadata.xml +++ b/dev-lang/pgi/metadata.xml @@ -1,18 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription> + <longdescription> PGI is the C/C++/Fortran compiler suite of the Portland Group. </longdescription> - <maintainer type="person"> - <email>gentryx@gmx.de</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="java">Install a PGI-tuned JRE.</flag> - <flag name="cuda">Install PGI's CUDA components (e.g. for OpenACC)</flag> - </use> + <maintainer type="person"> + <email>gentryx@gmx.de</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="java">Install a PGI-tuned JRE.</flag> + <flag name="cuda">Install PGI's CUDA components (e.g. for OpenACC)</flag> + </use> </pkgmetadata> diff --git a/dev-lang/terra/metadata.xml b/dev-lang/terra/metadata.xml index 3b7daac27..684a4dc29 100644 --- a/dev-lang/terra/metadata.xml +++ b/dev-lang/terra/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>ottxor@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> - <upstream> - <remote-id type="github">zdevito/terra</remote-id> - </upstream> + <maintainer type="person"> + <email>ottxor@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> + <upstream> + <remote-id type="github">zdevito/terra</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-lang/vtune/metadata.xml b/dev-lang/vtune/metadata.xml index 18adbb0c0..c46d15bb3 100644 --- a/dev-lang/vtune/metadata.xml +++ b/dev-lang/vtune/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>nbigaouette@gmail.com</email> - <name>Nicolas Bigaouette</name> - </maintainer> + <maintainer type="person"> + <email>nbigaouette@gmail.com</email> + <name>Nicolas Bigaouette</name> + </maintainer> </pkgmetadata> diff --git a/dev-lang/yaggo/metadata.xml b/dev-lang/yaggo/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-lang/yaggo/metadata.xml +++ b/dev-lang/yaggo/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-libs/asmjit/metadata.xml b/dev-libs/asmjit/metadata.xml index b86ea1dd8..be3086e71 100644 --- a/dev-libs/asmjit/metadata.xml +++ b/dev-libs/asmjit/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> AsmJit is complete x86/x64 JIT-Assembler for C++ language. It supports 32/64-bit x86 processors including all usable extensions (FPU, MMX, 3dNow, SSE, SSE2, SSE3 and SSE4) through type-safe API that mimics Intel diff --git a/dev-libs/boost-compute/metadata.xml b/dev-libs/boost-compute/metadata.xml index 50b082f43..23fa5aae7 100644 --- a/dev-libs/boost-compute/metadata.xml +++ b/dev-libs/boost-compute/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Boost.Compute is a GPU/parallel-computing library for C++ based on OpenCL. The core library is a thin C++ wrapper over the OpenCL API and provides access to compute devices, contexts, command queues and memory buffers. </longdescription> - <upstream> - <remote-id type="github">boostorg/compute</remote-id> - </upstream> + <upstream> + <remote-id type="github">boostorg/compute</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-libs/fortrancl/metadata.xml b/dev-libs/fortrancl/metadata.xml index b46223cbe..1543d123c 100644 --- a/dev-libs/fortrancl/metadata.xml +++ b/dev-libs/fortrancl/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> FortranCL is an OpenCL interface for Fortran 90. It allows programmers to call the OpenCL parallel programming framework directly from Fortran, so developers can accelerate their Fortran code using graphical processing units (GPU) and diff --git a/dev-libs/intel-common/metadata.xml b/dev-libs/intel-common/metadata.xml index f880bd7d1..ed553916d 100644 --- a/dev-libs/intel-common/metadata.xml +++ b/dev-libs/intel-common/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> This package contains the core files to be installed for the Intel compilers and libraries. Probably useless if installed standalone. </longdescription> - <use> - <flag name="compiler">Install the libraries needed for the icc and ifort compilers</flag> - <flag name="mic">Install the libraries needed for supporting Intel Many Integrated Core (Xeon Phi)</flag> - </use> + <use> + <flag name="compiler">Install the libraries needed for the icc and ifort compilers</flag> + <flag name="mic">Install the libraries needed for supporting Intel Many Integrated Core (Xeon Phi)</flag> + </use> </pkgmetadata> diff --git a/dev-libs/libconfig/metadata.xml b/dev-libs/libconfig/metadata.xml index 8b29a8e5d..910ab564a 100644 --- a/dev-libs/libconfig/metadata.xml +++ b/dev-libs/libconfig/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Libconfig is a simple library for processing structured configuration files. Libconfig is very compact — a fraction of the size of the expat XML parser library. This makes it well-suited for memory-constrained systems like handheld devices. diff --git a/dev-libs/libcuda/metadata.xml b/dev-libs/libcuda/metadata.xml index 137a77828..1bee8dd17 100644 --- a/dev-libs/libcuda/metadata.xml +++ b/dev-libs/libcuda/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> - <upstream> - <remote-id type="github">shinpei0208/gdev</remote-id> - </upstream> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <upstream> + <remote-id type="github">shinpei0208/gdev</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-libs/libflatarray/metadata.xml b/dev-libs/libflatarray/metadata.xml index 994e032f1..e130eb4d7 100644 --- a/dev-libs/libflatarray/metadata.xml +++ b/dev-libs/libflatarray/metadata.xml @@ -1,22 +1,22 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription> + <longdescription> LibGeoDecomp is a multi-dimensional C++ array class which provides an object-oriented view (a.k.a. array of structs, AoS) while internally storing data in a struct of arrays (SoA) manner. It comes with utilities to move data to CUDA enabled GPUs. </longdescription> - <maintainer type="person"> - <email>gentryx@gmx.de</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="cuda"> + <maintainer type="person"> + <email>gentryx@gmx.de</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="cuda"> Enables plugins for NVIDIA GPUs (e.g. CUDAAllocator) </flag> - </use> + </use> </pkgmetadata> diff --git a/dev-libs/libgdev/metadata.xml b/dev-libs/libgdev/metadata.xml index 137a77828..1bee8dd17 100644 --- a/dev-libs/libgdev/metadata.xml +++ b/dev-libs/libgdev/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> - <upstream> - <remote-id type="github">shinpei0208/gdev</remote-id> - </upstream> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <upstream> + <remote-id type="github">shinpei0208/gdev</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-libs/mxml/metadata.xml b/dev-libs/mxml/metadata.xml index e769ed6a9..91b1cf5d1 100644 --- a/dev-libs/mxml/metadata.xml +++ b/dev-libs/mxml/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="person"> - <email>cjk34@cam.ac.uk</email> - <name>Chris Kerr</name> - <description>I don't develop this software, I'm just a Gentoo user who + <maintainer type="person"> + <email>cjk34@cam.ac.uk</email> + <name>Chris Kerr</name> + <description>I don't develop this software, I'm just a Gentoo user who wanted to install it</description> -</maintainer> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription>Mini-XML is a lightweight, ultra-portable XML library + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>Mini-XML is a lightweight, ultra-portable XML library that requires only an ANSI C compiler and a 'make' program.</longdescription> -<use/> + <use/> </pkgmetadata> diff --git a/dev-libs/opencl-clhpp/metadata.xml b/dev-libs/opencl-clhpp/metadata.xml index 5ef422065..eb09296ba 100644 --- a/dev-libs/opencl-clhpp/metadata.xml +++ b/dev-libs/opencl-clhpp/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">KhronosGroup/OpenCL-CLHPP</remote-id> - </upstream> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">KhronosGroup/OpenCL-CLHPP</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-libs/simclist/metadata.xml b/dev-libs/simclist/metadata.xml index bbcd467aa..e795139c5 100644 --- a/dev-libs/simclist/metadata.xml +++ b/dev-libs/simclist/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> SimCList is a high quality C (C++ embeddable) library for handling lists. It exploits several advanced techniques for improving performance, including freelists, sentinels, automatic sort algorithm diff --git a/dev-libs/utf8proc/metadata.xml b/dev-libs/utf8proc/metadata.xml index bea4b0d50..c6efd7d5b 100644 --- a/dev-libs/utf8proc/metadata.xml +++ b/dev-libs/utf8proc/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> utf8proc is a library for processing UTF-8 encoded Unicode strings. Some features are Unicode normalization, stripping of default ignorable characters, case folding and detection of grapheme @@ -14,7 +14,7 @@ (U+2212) and “Hyphen-Minus” (U+002D, ASCII Minus) all into the ASCII minus sign, to make them equal for comparisons. </longdescription> - <upstream> - <remote-id type="github">JuliaLang/utf8proc</remote-id> - </upstream> + <upstream> + <remote-id type="github">JuliaLang/utf8proc</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-ml/lacaml/metadata.xml b/dev-ml/lacaml/metadata.xml index d11df4158..e3d0b1f12 100644 --- a/dev-ml/lacaml/metadata.xml +++ b/dev-ml/lacaml/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> BLAS/LAPACK-interface for OCaml </longdescription> - <upstream> - <remote-id type="bitbucket">mmottl/lacaml</remote-id> - </upstream> + <upstream> + <remote-id type="bitbucket">mmottl/lacaml</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-ml/mlgmpidl/metadata.xml b/dev-ml/mlgmpidl/metadata.xml index 0c2629449..02da151ce 100644 --- a/dev-ml/mlgmpidl/metadata.xml +++ b/dev-ml/mlgmpidl/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> MLGMPIDL is a package offering an interface to the GMP and MPFR libraries for OCaml version 3.07 or higher. The interface offers access to almost all the functions of the library, and is decomposed into 7 submodules. </longdescription> - <use> - <flag name="mpfr">Add support for <pkg>dev-libs/mpfr</pkg></flag> - </use> + <use> + <flag name="mpfr">Add support for <pkg>dev-libs/mpfr</pkg></flag> + </use> </pkgmetadata> diff --git a/dev-perl/Algorithm-Loops/metadata.xml b/dev-perl/Algorithm-Loops/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Algorithm-Loops/metadata.xml +++ b/dev-perl/Algorithm-Loops/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/BTLib/metadata.xml b/dev-perl/BTLib/metadata.xml index aa38b1c12..f872d82fd 100644 --- a/dev-perl/BTLib/metadata.xml +++ b/dev-perl/BTLib/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-perl/Bio-BigFile/metadata.xml b/dev-perl/Bio-BigFile/metadata.xml index 1d67411d5..138cb7705 100644 --- a/dev-perl/Bio-BigFile/metadata.xml +++ b/dev-perl/Bio-BigFile/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/dev-perl/Bio-DB-Das-Chado/metadata.xml b/dev-perl/Bio-DB-Das-Chado/metadata.xml index 1d67411d5..138cb7705 100644 --- a/dev-perl/Bio-DB-Das-Chado/metadata.xml +++ b/dev-perl/Bio-DB-Das-Chado/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/dev-perl/Bio-DB-HTS/metadata.xml b/dev-perl/Bio-DB-HTS/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Bio-DB-HTS/metadata.xml +++ b/dev-perl/Bio-DB-HTS/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Bio-EnsEMBL/metadata.xml b/dev-perl/Bio-EnsEMBL/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Bio-EnsEMBL/metadata.xml +++ b/dev-perl/Bio-EnsEMBL/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Config-Std/metadata.xml b/dev-perl/Config-Std/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Config-Std/metadata.xml +++ b/dev-perl/Config-Std/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/DBIx-DBStag/metadata.xml b/dev-perl/DBIx-DBStag/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-perl/DBIx-DBStag/metadata.xml +++ b/dev-perl/DBIx-DBStag/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Data-Types/metadata.xml b/dev-perl/Data-Types/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Data-Types/metadata.xml +++ b/dev-perl/Data-Types/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Lab-VISA/metadata.xml b/dev-perl/Lab-VISA/metadata.xml index d7298d70a..90bb64f30 100644 --- a/dev-perl/Lab-VISA/metadata.xml +++ b/dev-perl/Lab-VISA/metadata.xml @@ -1,7 +1,7 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mail@akhuettel.de</email> - </maintainer> + <maintainer type="person"> + <email>mail@akhuettel.de</email> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Log-Cabin/metadata.xml b/dev-perl/Log-Cabin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-perl/Log-Cabin/metadata.xml +++ b/dev-perl/Log-Cabin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Scalar-Util-Numeric/metadata.xml b/dev-perl/Scalar-Util-Numeric/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Scalar-Util-Numeric/metadata.xml +++ b/dev-perl/Scalar-Util-Numeric/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Set-IntSpan-Fast/metadata.xml b/dev-perl/Set-IntSpan-Fast/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Set-IntSpan-Fast/metadata.xml +++ b/dev-perl/Set-IntSpan-Fast/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Text-Graph/metadata.xml b/dev-perl/Text-Graph/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Text-Graph/metadata.xml +++ b/dev-perl/Text-Graph/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Text-ParseWords/metadata.xml b/dev-perl/Text-ParseWords/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-perl/Text-ParseWords/metadata.xml +++ b/dev-perl/Text-ParseWords/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Text-RecordParser/metadata.xml b/dev-perl/Text-RecordParser/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-perl/Text-RecordParser/metadata.xml +++ b/dev-perl/Text-RecordParser/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/Time-Progress/metadata.xml b/dev-perl/Time-Progress/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-perl/Time-Progress/metadata.xml +++ b/dev-perl/Time-Progress/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/go-db-perl/metadata.xml b/dev-perl/go-db-perl/metadata.xml index 959160fe4..8417d1580 100644 --- a/dev-perl/go-db-perl/metadata.xml +++ b/dev-perl/go-db-perl/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/go-perl/metadata.xml b/dev-perl/go-perl/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-perl/go-perl/metadata.xml +++ b/dev-perl/go-perl/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-perl/opal-client/metadata.xml b/dev-perl/opal-client/metadata.xml index 1cfc2883a..f475ca517 100644 --- a/dev-perl/opal-client/metadata.xml +++ b/dev-perl/opal-client/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">opaltoolkit</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">opaltoolkit</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/Forthon/metadata.xml b/dev-python/Forthon/metadata.xml index 989e06282..d97c22737 100644 --- a/dev-python/Forthon/metadata.xml +++ b/dev-python/Forthon/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> -<longdescription> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <longdescription> Forthon generates links between Fortran95 and Python. Python is a high level, object oriented, interactive and scripting language that allows a flexible and versatile interface to computational tools. The Forthon diff --git a/dev-python/GOGrapher/metadata.xml b/dev-python/GOGrapher/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-python/GOGrapher/metadata.xml +++ b/dev-python/GOGrapher/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/PeakUtils/metadata.xml b/dev-python/PeakUtils/metadata.xml index 32d3251d5..059847126 100644 --- a/dev-python/PeakUtils/metadata.xml +++ b/dev-python/PeakUtils/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> As the name implies, this package provides utilities related to the detection of peaks on 1D data. Includes functions to perform baseline estimation, to find the indexes of the peaks in the data and performing Gaussian fitting or centroid computation to further increase the resolution of the peak detection. </longdescription> - <upstream> - <remote-id type="bitbucket">lucashnegri/peakutils</remote-id> - <remote-id type="pypi">PeakUtils</remote-id> - </upstream> + <upstream> + <remote-id type="bitbucket">lucashnegri/peakutils</remote-id> + <remote-id type="pypi">PeakUtils</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/PyVISA-py/metadata.xml b/dev-python/PyVISA-py/metadata.xml index 26acc9198..6128d226c 100644 --- a/dev-python/PyVISA-py/metadata.xml +++ b/dev-python/PyVISA-py/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A PyVISA backend that implements a large part of the "Virtual Instrument Software Architecture" (VISA) in pure Python. </longdescription> - <upstream> - <remote-id type="github">hgrecco/pyvisa-py</remote-id> - <remote-id type="pypi">PyVISA-py</remote-id> - </upstream> + <upstream> + <remote-id type="github">hgrecco/pyvisa-py</remote-id> + <remote-id type="pypi">PyVISA-py</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/PyVISA/metadata.xml b/dev-python/PyVISA/metadata.xml index 19e1a51ca..555e1ea28 100644 --- a/dev-python/PyVISA/metadata.xml +++ b/dev-python/PyVISA/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A Python package for support of the "Virtual Instrument Software Architecture" (VISA), in order to control measurement devices and test equipment via GPIB, RS232, Ethernet or USB. </longdescription> - <upstream> - <remote-id type="github">hgrecco/pyvisa-py</remote-id> - <remote-id type="pypi">PyVISA</remote-id> - </upstream> + <upstream> + <remote-id type="github">hgrecco/pyvisa-py</remote-id> + <remote-id type="pypi">PyVISA</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/RecSQL/metadata.xml b/dev-python/RecSQL/metadata.xml index 355e9a516..a3daeebd2 100644 --- a/dev-python/RecSQL/metadata.xml +++ b/dev-python/RecSQL/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/arrayfire-python/metadata.xml b/dev-python/arrayfire-python/metadata.xml index 12f0d0584..c8d772966 100644 --- a/dev-python/arrayfire-python/metadata.xml +++ b/dev-python/arrayfire-python/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> ArrayFire is a high performance library for parallel computing wih an easy-to-use API. This package project Python bindings for the ArrayFire library. </longdescription> - <upstream> - <remote-id type="github">arrayfire/arrayfire-python</remote-id> - <remote-id type="pypi">arrayfire</remote-id> - </upstream> + <upstream> + <remote-id type="github">arrayfire/arrayfire-python</remote-id> + <remote-id type="pypi">arrayfire</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/astropy-helpers/metadata.xml b/dev-python/astropy-helpers/metadata.xml index 68d40928a..fec8db663 100644 --- a/dev-python/astropy-helpers/metadata.xml +++ b/dev-python/astropy-helpers/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> astropy-helpers is a collection of build tools used by astropy that may be used by other projects. </longdescription> - <upstream> - <remote-id type="github">astropy/astropy-helpers</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/astropy-helpers</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/astropy/metadata.xml b/dev-python/astropy/metadata.xml index eddb62a26..3d1dc456d 100644 --- a/dev-python/astropy/metadata.xml +++ b/dev-python/astropy/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/astropysics/metadata.xml b/dev-python/astropysics/metadata.xml index 1472408f0..0ea741042 100644 --- a/dev-python/astropysics/metadata.xml +++ b/dev-python/astropysics/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Astropysics leverages a variety of tools already developed for python to simplify quick-and-dirty calculations and streamline really hard ones. When paired with an interactive environment, it aims to be a full-featured replacement for IDL diff --git a/dev-python/astroquery/metadata.xml b/dev-python/astroquery/metadata.xml index 84e169547..2d17f54cd 100644 --- a/dev-python/astroquery/metadata.xml +++ b/dev-python/astroquery/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Astroquery is a package containing a collection of tools to use online astronomical databases. It integrates with Astropy and aims to support many services with a uniform API. </longdescription> - <upstream> - <remote-id type="github">astropy/astroquery</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/astroquery</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/bcbio-gff/metadata.xml b/dev-python/bcbio-gff/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-python/bcbio-gff/metadata.xml +++ b/dev-python/bcbio-gff/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/brewer2mpl/metadata.xml b/dev-python/brewer2mpl/metadata.xml index 42211a68b..e2e66a3e6 100644 --- a/dev-python/brewer2mpl/metadata.xml +++ b/dev-python/brewer2mpl/metadata.xml @@ -1,22 +1,22 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> brewer2mpl is a pure Python package for accessing colorbrewer2.org color maps from Python. With brewer2mpl you can get the raw RGB colors of all 165 colorbrewer2.org color maps. The color map data ships with brewer2mpl so no internet connection is required. </longdescription> - <upstream> - <remote-id type="github">jiffyclub/brewer2mpl</remote-id> - <remote-id type="pypi">brewer2mpl</remote-id> - </upstream> + <upstream> + <remote-id type="github">jiffyclub/brewer2mpl</remote-id> + <remote-id type="pypi">brewer2mpl</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/busfactor/metadata.xml b/dev-python/busfactor/metadata.xml index edbc63649..ddd09607c 100644 --- a/dev-python/busfactor/metadata.xml +++ b/dev-python/busfactor/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-python/ccdproc/metadata.xml b/dev-python/ccdproc/metadata.xml index e634ec8d8..47d993d8e 100644 --- a/dev-python/ccdproc/metadata.xml +++ b/dev-python/ccdproc/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> ccdproc is a AstroPy-affliated package for the basic reduction of CCD images. It provides a framework for accounting for error propagation and bad pixel tracking through the reduction steps. </longdescription> - <upstream> - <remote-id type="github">astropy/ccdproc</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/ccdproc</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/coards/metadata.xml b/dev-python/coards/metadata.xml index 77d8a36e7..95bd08e32 100644 --- a/dev-python/coards/metadata.xml +++ b/dev-python/coards/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <longdescription lang="en"> This module converts between a given COARDS time specification and a Python datetime object, which is much more useful. </longdescription> - <upstream> - <remote-id type="pypi">coards</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">coards</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/coords/metadata.xml b/dev-python/coords/metadata.xml index 94198d2ea..3e5eb239e 100644 --- a/dev-python/coords/metadata.xml +++ b/dev-python/coords/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> coords is a part of Astrolib and provide a set of routines for managing astronomical coordinate systems </longdescription> diff --git a/dev-python/cosmocalc/metadata.xml b/dev-python/cosmocalc/metadata.xml index 3563cede1..fa2ced1cd 100644 --- a/dev-python/cosmocalc/metadata.xml +++ b/dev-python/cosmocalc/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Calculate useful values for a given cosmology. This module uses code adapted from CC.py (James Schombert) which is a Python version of the Cosmology Calculator (Ned Wright). diff --git a/dev-python/dijitso/metadata.xml b/dev-python/dijitso/metadata.xml index cb17acf08..0b22fbbcd 100644 --- a/dev-python/dijitso/metadata.xml +++ b/dev-python/dijitso/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/dimensionful/metadata.xml b/dev-python/dimensionful/metadata.xml index c156f9144..cd6735682 100644 --- a/dev-python/dimensionful/metadata.xml +++ b/dev-python/dimensionful/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <upstream> - <remote-id type="github">caseywstark/dimensionful</remote-id> - </upstream> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <upstream> + <remote-id type="github">caseywstark/dimensionful</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ffc/metadata.xml b/dev-python/ffc/metadata.xml index 35bb1f59e..bf5f22263 100644 --- a/dev-python/ffc/metadata.xml +++ b/dev-python/ffc/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/ffnet/metadata.xml b/dev-python/ffnet/metadata.xml index 84e07f038..7bcbdf69d 100644 --- a/dev-python/ffnet/metadata.xml +++ b/dev-python/ffnet/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> ffnet is a fast and easy-to-use feed-forward neural network training library for python. </longdescription> - <use> - <flag name="matplotlib">Use matplotlib for drawing</flag> - </use> - <upstream> - <remote-id type="pypi">ffnet</remote-id> - <remote-id type="sourceforge">ffnet</remote-id> - </upstream> + <use> + <flag name="matplotlib">Use matplotlib for drawing</flag> + </use> + <upstream> + <remote-id type="pypi">ffnet</remote-id> + <remote-id type="sourceforge">ffnet</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ffnetui/metadata.xml b/dev-python/ffnetui/metadata.xml index fe996f826..f55ef05e1 100644 --- a/dev-python/ffnetui/metadata.xml +++ b/dev-python/ffnetui/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> GUI for ffnet - feed forward neural network for python </longdescription> - <upstream> - <remote-id type="pypi">ffnetui</remote-id> - <remote-id type="sourceforge">ffnet</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">ffnetui</remote-id> + <remote-id type="sourceforge">ffnet</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/fiat/metadata.xml b/dev-python/fiat/metadata.xml index c3aad9140..67ce0c487 100644 --- a/dev-python/fiat/metadata.xml +++ b/dev-python/fiat/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/gammapy/metadata.xml b/dev-python/gammapy/metadata.xml index 9ab0a8d12..d691d33fe 100644 --- a/dev-python/gammapy/metadata.xml +++ b/dev-python/gammapy/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Gammapy is a package for simulating and analysing gamma-ray sky data. It is currently designed to support users of telescopes such as Fermi, H.E.S.S, and CTA in primarily Galactic plane survey studies. </longdescription> - <upstream> - <remote-id type="github">gammapy/gammapy</remote-id> - </upstream> + <upstream> + <remote-id type="github">gammapy/gammapy</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/gitana/metadata.xml b/dev-python/gitana/metadata.xml index 221a98348..65ccba066 100644 --- a/dev-python/gitana/metadata.xml +++ b/dev-python/gitana/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-python/hdf5storage/metadata.xml b/dev-python/hdf5storage/metadata.xml index 8ce73fe8c..73ae4ea5c 100644 --- a/dev-python/hdf5storage/metadata.xml +++ b/dev-python/hdf5storage/metadata.xml @@ -1,23 +1,23 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> This Python package provides high level utilities to read/write a variety of Python types to/from HDF5 (Heirarchal Data Format) formatted files. This package also provides support for MATLAB MAT v7.3 formatted files, which are just HDF5 files with a different extension and some extra meta-data. </longdescription> - <upstream> - <remote-id type="github">frejanordsiek/hdf5storage</remote-id> - <remote-id type="pypi">hdf5storage</remote-id> - </upstream> + <upstream> + <remote-id type="github">frejanordsiek/hdf5storage</remote-id> + <remote-id type="pypi">hdf5storage</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/imageutils/metadata.xml b/dev-python/imageutils/metadata.xml index 8f422b20a..95065b351 100644 --- a/dev-python/imageutils/metadata.xml +++ b/dev-python/imageutils/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> imageutils is a collection of image processing utilities that are generally useful to astronomers. These will likely become part of the core AstroPy package before the 1.0 release. </longdescription> - <upstream> - <remote-id type="github">astropy/imageutils</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/imageutils</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/inference/metadata.xml b/dev-python/inference/metadata.xml index f93f34858..528a07501 100644 --- a/dev-python/inference/metadata.xml +++ b/dev-python/inference/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The inference package is a collection of Python modules implementing a variety of methods targeting the statistical inference problems—and the statistical modeling style—of the physical diff --git a/dev-python/instant/metadata.xml b/dev-python/instant/metadata.xml index 0aa8827a4..8da29b3a0 100644 --- a/dev-python/instant/metadata.xml +++ b/dev-python/instant/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/ipykernel/metadata.xml b/dev-python/ipykernel/metadata.xml index d87bc07db..a938c561c 100644 --- a/dev-python/ipykernel/metadata.xml +++ b/dev-python/ipykernel/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> This package provides the IPython kernel for Jupyter. </longdescription> - <upstream> - <remote-id type="github">ipython/ipykernel</remote-id> - </upstream> + <upstream> + <remote-id type="github">ipython/ipykernel</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ipyparallel/metadata.xml b/dev-python/ipyparallel/metadata.xml index bd6c5c2e0..d636b5640 100644 --- a/dev-python/ipyparallel/metadata.xml +++ b/dev-python/ipyparallel/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Interactive Parallel Computing with IPython. ipyparallel is the new home of IPython.parallel. </longdescription> diff --git a/dev-python/ipython_genutils/metadata.xml b/dev-python/ipython_genutils/metadata.xml index 52164c08d..92090add1 100644 --- a/dev-python/ipython_genutils/metadata.xml +++ b/dev-python/ipython_genutils/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> This package contains some common utilities shared by Jupyter and IPython projects during The Big Split. As soon as possible, those packages will remove their dependency on this, and this repo will go away. No packages outside IPython/Jupyter should depend on it. </longdescription> - <upstream> - <remote-id type="github">ipython/ipython_genutils</remote-id> - </upstream> + <upstream> + <remote-id type="github">ipython/ipython_genutils</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ipywidgets/metadata.xml b/dev-python/ipywidgets/metadata.xml index 4495ebb74..7c5fbee17 100644 --- a/dev-python/ipywidgets/metadata.xml +++ b/dev-python/ipywidgets/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Interactive HTML widgets for Jupyter notebooks and the IPython kernel. </longdescription> - <upstream> - <remote-id type="pypi">ipywidgets</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">ipywidgets</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/jupyter_client/metadata.xml b/dev-python/jupyter_client/metadata.xml index fbd1af5b5..e7ee52515 100644 --- a/dev-python/jupyter_client/metadata.xml +++ b/dev-python/jupyter_client/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Contains the reference implementation of the Jupyter protocol. It also provides client and kernel management APIs for working with kernels. It also provides the jupyter kernelspec entrypoint for diff --git a/dev-python/jupyter_console/metadata.xml b/dev-python/jupyter_console/metadata.xml index a2b19aeaf..553beaef0 100644 --- a/dev-python/jupyter_console/metadata.xml +++ b/dev-python/jupyter_console/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A terminal-based console frontend for Jupyter kernels. This code is based on the single-process IPython terminal. </longdescription> diff --git a/dev-python/jupyter_core/metadata.xml b/dev-python/jupyter_core/metadata.xml index 88e71aa2c..af36b0845 100644 --- a/dev-python/jupyter_core/metadata.xml +++ b/dev-python/jupyter_core/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Core common functionality of Jupyter projects. This package contains base application classes and configuration inhertited by other projects. It doesn't do much on its own. diff --git a/dev-python/matlab_wrapper/metadata.xml b/dev-python/matlab_wrapper/metadata.xml index 38df0353a..fc0385f4f 100644 --- a/dev-python/matlab_wrapper/metadata.xml +++ b/dev-python/matlab_wrapper/metadata.xml @@ -1,23 +1,23 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> matlab_wrapper allows you to use MATLAB in a convenient way in Python. You can call MATLAB functions and access workspace variables directly from your Python scripts and interactive shell. MATLAB session is started in the background and appears as a regular Python module. </longdescription> - <upstream> - <remote-id type="github">mrkrd/matlab_wrapper</remote-id> - <remote-id type="pypi">matlab_wrapper</remote-id> - </upstream> + <upstream> + <remote-id type="github">mrkrd/matlab_wrapper</remote-id> + <remote-id type="pypi">matlab_wrapper</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/matplotlib-venn/metadata.xml b/dev-python/matplotlib-venn/metadata.xml index cae4c83f9..6c79256de 100644 --- a/dev-python/matplotlib-venn/metadata.xml +++ b/dev-python/matplotlib-venn/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="pypi">matplotlib-venn</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="pypi">matplotlib-venn</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/matplotlib2tikz/metadata.xml b/dev-python/matplotlib2tikz/metadata.xml index 9dc28cbe0..7e9013abe 100644 --- a/dev-python/matplotlib2tikz/metadata.xml +++ b/dev-python/matplotlib2tikz/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-python/matrix2latex/metadata.xml b/dev-python/matrix2latex/metadata.xml index e8cce6c4b..c84a3bc91 100644 --- a/dev-python/matrix2latex/metadata.xml +++ b/dev-python/matrix2latex/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/meshpy/metadata.xml b/dev-python/meshpy/metadata.xml index 18f3e3730..250f08d0e 100644 --- a/dev-python/meshpy/metadata.xml +++ b/dev-python/meshpy/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> MeshPy offers quality triangular and tetrahedral mesh generation for Python. Meshes of this type are chiefly used in finite-element simulation codes, but also have many other applications ranging from computer graphics to robotics. @@ -13,7 +13,7 @@ In order to generate these 2D and 3D meshes, MeshPy provides Python interfaces to two well-regarded mesh generators, Triangle by J. Shewchuk and TetGen by Hang Si. Both are included in the package in slightly modified versions. </longdescription> - <upstream> - <remote-id type="pypi">MeshPy</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">MeshPy</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/metakernel/metadata.xml b/dev-python/metakernel/metadata.xml index e0c68c929..15370beff 100644 --- a/dev-python/metakernel/metadata.xml +++ b/dev-python/metakernel/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A Jupyter/IPython kernel template which includes core magic functions (including help, command and file path completion, parallel and distributed processing, downloads, and much more). </longdescription> - <upstream> - <remote-id type="github">Calysto/metakernel</remote-id> - <remote-id type="pypi">metakernel</remote-id> - </upstream> + <upstream> + <remote-id type="github">Calysto/metakernel</remote-id> + <remote-id type="pypi">metakernel</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/metakernel_bash/metadata.xml b/dev-python/metakernel_bash/metadata.xml index 286d590e3..932dab97a 100644 --- a/dev-python/metakernel_bash/metadata.xml +++ b/dev-python/metakernel_bash/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A Bash kernel for Jupyter/IPython, based on MetaKernel. </longdescription> - <upstream> - <remote-id type="github">Calysto/metakernel</remote-id> - <remote-id type="pypi">metakernel_bash</remote-id> - </upstream> + <upstream> + <remote-id type="github">Calysto/metakernel</remote-id> + <remote-id type="pypi">metakernel_bash</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/metakernel_python/metadata.xml b/dev-python/metakernel_python/metadata.xml index aaf6cb9d7..6a1c69057 100644 --- a/dev-python/metakernel_python/metadata.xml +++ b/dev-python/metakernel_python/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A Python kernel for Jupyter/IPython, based on MetaKernel. </longdescription> - <upstream> - <remote-id type="github">Calysto/metakernel</remote-id> - <remote-id type="pypi">metakernel_python</remote-id> - </upstream> + <upstream> + <remote-id type="github">Calysto/metakernel</remote-id> + <remote-id type="pypi">metakernel_python</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/nbconvert/metadata.xml b/dev-python/nbconvert/metadata.xml index d9cbf5baa..e26b3e53a 100644 --- a/dev-python/nbconvert/metadata.xml +++ b/dev-python/nbconvert/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Jupyter NBConvert converts Jupyter notebooks to various other formats via Jinja templates. </longdescription> diff --git a/dev-python/nbdime/metadata.xml b/dev-python/nbdime/metadata.xml index 5a8712352..b57da319a 100644 --- a/dev-python/nbdime/metadata.xml +++ b/dev-python/nbdime/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> nbdime provides tools for diffing and merging of Jupyter Notebooks. </longdescription> - <use> - <flag name="webtools"> + <use> + <flag name="webtools"> Install web-based diff and merge tools. </flag> - </use> + </use> </pkgmetadata> diff --git a/dev-python/nbformat/metadata.xml b/dev-python/nbformat/metadata.xml index 4788ba53f..d58b06385 100644 --- a/dev-python/nbformat/metadata.xml +++ b/dev-python/nbformat/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Jupyther nbformat contains the reference implementation of the Jupyter Notebook format, and Python APIs for working with notebooks. There is also a JSON schema for notebook format diff --git a/dev-python/nbviewer/metadata.xml b/dev-python/nbviewer/metadata.xml index 3b58897ca..fed1faba7 100644 --- a/dev-python/nbviewer/metadata.xml +++ b/dev-python/nbviewer/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Jupyter nbviewer is the web application behind The Jupyter Notebook Viewer, which is graciously hosted by Rackspace. Run this locally to get most of the features of nbviewer on your own network. diff --git a/dev-python/newrelic/metadata.xml b/dev-python/newrelic/metadata.xml index 4a7c9adc5..c6f6fe8d4 100644 --- a/dev-python/newrelic/metadata.xml +++ b/dev-python/newrelic/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Python agent for the New Relic web application performance monitoring service. </longdescription> - <upstream> - <remote-id type="pypi">newrelic</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">newrelic</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ngslib/metadata.xml b/dev-python/ngslib/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-python/ngslib/metadata.xml +++ b/dev-python/ngslib/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/notebook/metadata.xml b/dev-python/notebook/metadata.xml index 8161170dc..36a119d62 100644 --- a/dev-python/notebook/metadata.xml +++ b/dev-python/notebook/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> The Jupyter HTML notebook is a web-based notebook environment for interactive computing. </longdescription> - <upstream> - <remote-id type="pypi">notebook</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">notebook</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/omniorbpy/metadata.xml b/dev-python/omniorbpy/metadata.xml index d47182280..39a7f8b65 100644 --- a/dev-python/omniorbpy/metadata.xml +++ b/dev-python/omniorbpy/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">omniorb</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">omniorb</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/opal-client/metadata.xml b/dev-python/opal-client/metadata.xml index 7aac60648..bd5beea0b 100644 --- a/dev-python/opal-client/metadata.xml +++ b/dev-python/opal-client/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">opaltoolkit</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">opaltoolkit</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pamela/metadata.xml b/dev-python/pamela/metadata.xml index e55257c75..879389634 100644 --- a/dev-python/pamela/metadata.xml +++ b/dev-python/pamela/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> An interface to the Pluggable Authentication Modules (PAM) library, written in pure Python (using ctypes). </longdescription> - <upstream> - <remote-id type="github">minrk/pamela</remote-id> - <remote-id type="pypi">pamela</remote-id> - </upstream> + <upstream> + <remote-id type="github">minrk/pamela</remote-id> + <remote-id type="pypi">pamela</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/photutils/metadata.xml b/dev-python/photutils/metadata.xml index 00ee2183b..d98fc6b24 100644 --- a/dev-python/photutils/metadata.xml +++ b/dev-python/photutils/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> photutils is a python package for determining photometric properties of sources in astronomical images. This includes source detection, centroid and shape parameters, and performing photometry. </longdescription> - <upstream> - <remote-id type="github">astropy/photutils</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/photutils</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pickleshare/metadata.xml b/dev-python/pickleshare/metadata.xml index 967d08889..ae14e7372 100644 --- a/dev-python/pickleshare/metadata.xml +++ b/dev-python/pickleshare/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Like shelve, a PickleShareDB object acts like a normal dictionary. Unlike shelve, many processes can access the database simultaneously. Changing a value in database is immediately visible @@ -14,7 +14,7 @@ files. Hence the "database" is a directory where all files are governed by PickleShare. </longdescription> - <upstream> - <remote-id type="github">pickleshare/pickleshare</remote-id> - </upstream> + <upstream> + <remote-id type="github">pickleshare/pickleshare</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/prettyplotlib/metadata.xml b/dev-python/prettyplotlib/metadata.xml index 615f1b6db..a1a656ec9 100644 --- a/dev-python/prettyplotlib/metadata.xml +++ b/dev-python/prettyplotlib/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <longdescription> Python matplotlib-enhancer library which painlessly creates beautiful default matplotlib plots. </longdescription> - <upstream> - <remote-id type="pypi">prettyplotlib</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">prettyplotlib</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/prov/metadata.xml b/dev-python/prov/metadata.xml index 1b4b150fb..fc3d9fabb 100644 --- a/dev-python/prov/metadata.xml +++ b/dev-python/prov/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> A library for W3C Provenance Data Model supporting PROV-JSON and PROV-XML import/export </longdescription> - <upstream> - <remote-id type="pypi">prov</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">prov</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/psubprocess/metadata.xml b/dev-python/psubprocess/metadata.xml index 1699e58b2..138cb7705 100644 --- a/dev-python/psubprocess/metadata.xml +++ b/dev-python/psubprocess/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/ptyprocess/metadata.xml b/dev-python/ptyprocess/metadata.xml index ea8694355..33094cdb7 100644 --- a/dev-python/ptyprocess/metadata.xml +++ b/dev-python/ptyprocess/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">pexpect/ptyprocess</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">pexpect/ptyprocess</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/py2bit/metadata.xml b/dev-python/py2bit/metadata.xml index 71d7d5a6a..4f1030617 100644 --- a/dev-python/py2bit/metadata.xml +++ b/dev-python/py2bit/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">dpryan79/py2bit</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">dpryan79/py2bit</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pyBigWig/metadata.xml b/dev-python/pyBigWig/metadata.xml index 764884a58..c4302e542 100644 --- a/dev-python/pyBigWig/metadata.xml +++ b/dev-python/pyBigWig/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">dpryan79/pyBigWig</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">dpryan79/pyBigWig</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pydotplus/metadata.xml b/dev-python/pydotplus/metadata.xml index eb80ef0cd..e20862b8a 100644 --- a/dev-python/pydotplus/metadata.xml +++ b/dev-python/pydotplus/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> PyDotPlus is an improved version of the old pydot project that provides a Python Interface to Graphviz’s Dot language. </longdescription> - <upstream> - <remote-id type="pypi">pydotplus</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydotplus</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pyfftw/metadata.xml b/dev-python/pyfftw/metadata.xml index 174e4dbdc..bc5ec1bc7 100644 --- a/dev-python/pyfftw/metadata.xml +++ b/dev-python/pyfftw/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A pythonic wrapper around FFTW, the FFT library, presenting a unified interface for all the supported transforms. </longdescription> - <upstream> - <remote-id type="pypi">pyFFTW</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pyFFTW</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pyhdf/metadata.xml b/dev-python/pyhdf/metadata.xml index d38ca85ff..6a3e3ff5d 100644 --- a/dev-python/pyhdf/metadata.xml +++ b/dev-python/pyhdf/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>gorkypl@gmail.com</email> - <name>Paweł Rumian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <use> - <flag name="szip">Allow to use <pkg>sci-libs/szip</pkg> for SZIP compression method in SDsetcompress()</flag> - </use> - <upstream> - <remote-id type="sourceforge">pysclint</remote-id> - </upstream> + <maintainer type="person"> + <email>gorkypl@gmail.com</email> + <name>Paweł Rumian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <use> + <flag name="szip">Allow to use <pkg>sci-libs/szip</pkg> for SZIP compression method in SDsetcompress()</flag> + </use> + <upstream> + <remote-id type="sourceforge">pysclint</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pylibconfig2/metadata.xml b/dev-python/pylibconfig2/metadata.xml index e260b7fe1..78f60d79f 100644 --- a/dev-python/pylibconfig2/metadata.xml +++ b/dev-python/pylibconfig2/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Pure python library for libconfig syntax. IO works via strings, and include directives. @@ -18,8 +18,8 @@ ConfList, ConfGroup, respectively. A config is setup from a string only, and represented as a string automatically. </longdescription> - <upstream> - <remote-id type="github">heinzK1X/pylibconfig2</remote-id> - <remote-id type="pypi">pylibconfig2</remote-id> - </upstream> + <upstream> + <remote-id type="github">heinzK1X/pylibconfig2</remote-id> + <remote-id type="pypi">pylibconfig2</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pynomo/metadata.xml b/dev-python/pynomo/metadata.xml index f365ddf66..6e70e7086 100644 --- a/dev-python/pynomo/metadata.xml +++ b/dev-python/pynomo/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>witold.pilat@gmail.com</email> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>witold.pilat@gmail.com</email> + </maintainer> + <longdescription> Pynomo is a program to create (pdf) nomographs (nomograms) using Python interpreter. A nomograph (nomogram) is a graphical solution to an equation. </longdescription> - <upstream> - <remote-id type="sourceforge">pynomo</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">pynomo</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pysolar/metadata.xml b/dev-python/pysolar/metadata.xml index fe8be1b12..6e7d0ab03 100644 --- a/dev-python/pysolar/metadata.xml +++ b/dev-python/pysolar/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Pysolar is a collection of Python libraries for simulating the irradiation of any point on earth by the sun. It includes code for extremely precise ephemeris calculations, and more. Pysolar can calculate the location of the sun or the shading percentage as a function of time for a row of 2-axis tracked panels. </longdescription> - <upstream> - <remote-id type="github">pingswept/pysolar</remote-id> - </upstream> + <upstream> + <remote-id type="github">pingswept/pysolar</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/python-ivi/metadata.xml b/dev-python/python-ivi/metadata.xml index 630240a1d..1944d07dc 100644 --- a/dev-python/python-ivi/metadata.xml +++ b/dev-python/python-ivi/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Python IVI is a Python-based interpretation of the Interchangeable Virtual Instrument standard from the IVI foundation. Python IVI can use Python VXI-11, Python USBTMC, PyVISA, pySerial and linux-gpib to connect to instruments. </longdescription> - <upstream> - <remote-id type="github">python-ivi/python-ivi</remote-id> - </upstream> + <upstream> + <remote-id type="github">python-ivi/python-ivi</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/python-vxi11/metadata.xml b/dev-python/python-vxi11/metadata.xml index 72510adc7..49ec289af 100644 --- a/dev-python/python-vxi11/metadata.xml +++ b/dev-python/python-vxi11/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Python VXI-11 is a Python implementation of the VXI-11 Ethernet instrument control protocol. It is compatible with VXI-11, LXI instruments and VXI-11 to GPIB bridges (HP E2050A, etc.). </longdescription> - <upstream> - <remote-id type="github">python-ivi/python-vxi11</remote-id> - </upstream> + <upstream> + <remote-id type="github">python-ivi/python-vxi11</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pythoncgns/metadata.xml b/dev-python/pythoncgns/metadata.xml index 35f35f0b7..ba0b86026 100644 --- a/dev-python/pythoncgns/metadata.xml +++ b/dev-python/pythoncgns/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="pypi">CGNS</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="pypi">CGNS</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pythonqt/metadata.xml b/dev-python/pythonqt/metadata.xml index 364efbdc3..59cf1334d 100644 --- a/dev-python/pythonqt/metadata.xml +++ b/dev-python/pythonqt/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">pythonqt</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">pythonqt</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/pyvcf/metadata.xml b/dev-python/pyvcf/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-python/pyvcf/metadata.xml +++ b/dev-python/pyvcf/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-python/qtconsole/metadata.xml b/dev-python/qtconsole/metadata.xml index 93199c605..49db3eb90 100644 --- a/dev-python/qtconsole/metadata.xml +++ b/dev-python/qtconsole/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A rich Qt-based console for working with Jupyter kernels, supporting rich media output, session export, and more. </longdescription> diff --git a/dev-python/shove/metadata.xml b/dev-python/shove/metadata.xml index a5faa4b26..597a68368 100644 --- a/dev-python/shove/metadata.xml +++ b/dev-python/shove/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">lcrees/shove</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">lcrees/shove</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/snakemake/metadata.xml b/dev-python/snakemake/metadata.xml index a21e3edfd..cff648bf6 100644 --- a/dev-python/snakemake/metadata.xml +++ b/dev-python/snakemake/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>python@gentoo.org</email> - <name>Python</name> - </maintainer> - <upstream> - <remote-id type="bitbucket">johanneskoester/snakemake</remote-id> - <remote-id type="pypi">snakemake</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>python@gentoo.org</email> + <name>Python</name> + </maintainer> + <upstream> + <remote-id type="bitbucket">johanneskoester/snakemake</remote-id> + <remote-id type="pypi">snakemake</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/specutils/metadata.xml b/dev-python/specutils/metadata.xml index 6e70cb363..bbb7bb9f3 100644 --- a/dev-python/specutils/metadata.xml +++ b/dev-python/specutils/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> specutils is a package to implement utilities and data structures to analyse astronomical spectra within python. It extends NDData from Astropy into a class with special handling of 1D spectra. </longdescription> - <upstream> - <remote-id type="github">astropy/specutils</remote-id> - </upstream> + <upstream> + <remote-id type="github">astropy/specutils</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/symengine/metadata.xml b/dev-python/symengine/metadata.xml index ffc78518d..e8f764b63 100644 --- a/dev-python/symengine/metadata.xml +++ b/dev-python/symengine/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <upstream> - <remote-id type="github">sympy/symengine.py</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <upstream> + <remote-id type="github">sympy/symengine.py</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/testpath/metadata.xml b/dev-python/testpath/metadata.xml index 7183f762d..2d4f93498 100644 --- a/dev-python/testpath/metadata.xml +++ b/dev-python/testpath/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Testpath is a collection of utilities for Python code working with files and commands. It contains functions to check things on the filesystem, and tools for mocking system commands and recording diff --git a/dev-python/traitlets/metadata.xml b/dev-python/traitlets/metadata.xml index a1cab5d48..cad83b0c6 100644 --- a/dev-python/traitlets/metadata.xml +++ b/dev-python/traitlets/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A lightweight pure-Python derivative of Enthought Traits, used for configuring Python objects. This package powers the config system of IPython and Jupyter. </longdescription> - <upstream> - <remote-id type="github">ipython/traitlets</remote-id> - </upstream> + <upstream> + <remote-id type="github">ipython/traitlets</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/ufl/metadata.xml b/dev-python/ufl/metadata.xml index 480a531aa..649442138 100644 --- a/dev-python/ufl/metadata.xml +++ b/dev-python/ufl/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/viper/metadata.xml b/dev-python/viper/metadata.xml index 18c1efff5..430a78511 100644 --- a/dev-python/viper/metadata.xml +++ b/dev-python/viper/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-python/widgetsnbextension/metadata.xml b/dev-python/widgetsnbextension/metadata.xml index 56daebe56..a594f2891 100644 --- a/dev-python/widgetsnbextension/metadata.xml +++ b/dev-python/widgetsnbextension/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Interactive HTML widgets for Jupyter notebooks. </longdescription> - <upstream> - <remote-id type="pypi">widgetsnbextension</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">widgetsnbextension</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-python/xopen/metadata.xml b/dev-python/xopen/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/dev-python/xopen/metadata.xml +++ b/dev-python/xopen/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/dev-tcltk/img_rotate/metadata.xml b/dev-tcltk/img_rotate/metadata.xml index 2cb3f2bf3..f1310b451 100644 --- a/dev-tcltk/img_rotate/metadata.xml +++ b/dev-tcltk/img_rotate/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/dev-tcltk/togl/metadata.xml b/dev-tcltk/togl/metadata.xml index 9499d8d89..c191e6dbe 100644 --- a/dev-tcltk/togl/metadata.xml +++ b/dev-tcltk/togl/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">togl</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">togl</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-tex/pythontex/metadata.xml b/dev-tex/pythontex/metadata.xml index dc4de7cb4..02c7c504c 100644 --- a/dev-tex/pythontex/metadata.xml +++ b/dev-tex/pythontex/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <use> - <flag name="highlighting">PLEASE FIX MY DESCRIPTION</flag> - </use> - <upstream> - <remote-id type="github">gpoore/pythontex</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <use> + <flag name="highlighting">PLEASE FIX MY DESCRIPTION</flag> + </use> + <upstream> + <remote-id type="github">gpoore/pythontex</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-util/VampirTrace/metadata.xml b/dev-util/VampirTrace/metadata.xml index 925a26dfa..30bd07139 100644 --- a/dev-util/VampirTrace/metadata.xml +++ b/dev-util/VampirTrace/metadata.xml @@ -1,19 +1,19 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription> + <longdescription> VampirTrace is an open source library that allows detailed logging of program execution for parallel applications using message passing (MPI) and threads (OpenMP), Pthreads). Besides these typical parallelization paradigms, VampirTrace is capable of tracing GPU accelerated applications and generates exact time stamps for all GPU related events. </longdescription> - <maintainer type="person"> - <email>gentryx@gmx.de</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="cuda"> + <maintainer type="person"> + <email>gentryx@gmx.de</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="cuda"> Enable tracing of CUDA calls and GPU kernels. </flag> - </use> + </use> </pkgmetadata> diff --git a/dev-util/amdapp/metadata.xml b/dev-util/amdapp/metadata.xml index c26897c19..4557d6be7 100644 --- a/dev-util/amdapp/metadata.xml +++ b/dev-util/amdapp/metadata.xml @@ -1,18 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription> + <longdescription> AMD Accelerated Parallel Processing (APP) is an SDK which includes the Bolt libraries and an OpenCL implementation for AMD's CPUs and GPUs. </longdescription> - <maintainer type="person"> - <email>gentryx@gmx.de</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="examples">Build the OpenCL example programs</flag> - </use> + <maintainer type="person"> + <email>gentryx@gmx.de</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="examples">Build the OpenCL example programs</flag> + </use> </pkgmetadata> diff --git a/dev-util/emscripten-fastcomp/metadata.xml b/dev-util/emscripten-fastcomp/metadata.xml index ee38ab80a..89b91870f 100644 --- a/dev-util/emscripten-fastcomp/metadata.xml +++ b/dev-util/emscripten-fastcomp/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-util/emscripten/metadata.xml b/dev-util/emscripten/metadata.xml index bbd406949..b2ee118ca 100644 --- a/dev-util/emscripten/metadata.xml +++ b/dev-util/emscripten/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/dev-util/mad-numdiff/metadata.xml b/dev-util/mad-numdiff/metadata.xml index 729575510..327c383a6 100644 --- a/dev-util/mad-numdiff/metadata.xml +++ b/dev-util/mad-numdiff/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>junghans@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <upstream> - <remote-id type="github">quinoacomputing/ndiff</remote-id> - </upstream> + <maintainer type="person"> + <email>junghans@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <upstream> + <remote-id type="github">quinoacomputing/ndiff</remote-id> + </upstream> </pkgmetadata> diff --git a/dev-util/ndiff/metadata.xml b/dev-util/ndiff/metadata.xml index cf0cf4a0a..27bcacd8e 100644 --- a/dev-util/ndiff/metadata.xml +++ b/dev-util/ndiff/metadata.xml @@ -5,7 +5,7 @@ <email>AstroFloyd@gmail.com</email> <name>AstroFloyd</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci@gentoo.org</email> <name>Gentoo Science Project</name> </maintainer> diff --git a/dev-util/nvidia-cuda-gdk/metadata.xml b/dev-util/nvidia-cuda-gdk/metadata.xml index 089f3983a..36d95e29b 100644 --- a/dev-util/nvidia-cuda-gdk/metadata.xml +++ b/dev-util/nvidia-cuda-gdk/metadata.xml @@ -1,24 +1,24 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> The GPU Deployment Kit (previously known as the Tesla Deployment Kit) is a set of tools provided for the NVIDIA Tesla™, GRID™ and Quadro™ GPUs. </longdescription> - <use> - <flag name="healthmon">Install nvidia-healthmon.</flag> - <flag name="nvml">Install the NVIDIA Managment Library.</flag> - <flag name="nvvs"> + <use> + <flag name="healthmon">Install nvidia-healthmon.</flag> + <flag name="nvml">Install the NVIDIA Managment Library.</flag> + <flag name="nvvs"> Install the NVIDIA Validation Suite. </flag> - </use> + </use> </pkgmetadata> diff --git a/media-gfx/PhiloGL/metadata.xml b/media-gfx/PhiloGL/metadata.xml index 06dd1e4b1..c62a87f48 100644 --- a/media-gfx/PhiloGL/metadata.xml +++ b/media-gfx/PhiloGL/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> </pkgmetadata> diff --git a/media-gfx/brlcad/metadata.xml b/media-gfx/brlcad/metadata.xml index a5755a70a..efdd0d778 100644 --- a/media-gfx/brlcad/metadata.xml +++ b/media-gfx/brlcad/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>dongxuli2011@gmail.com</email> - <description>please assign bugs</description> - </maintainer> - <maintainer type="person"> - <email>dilfridge@gentoo.org</email> - <description>proxy-maintainer, please cc on bugs</description> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>dongxuli2011@gmail.com</email> + <description>please assign bugs</description> + </maintainer> + <maintainer type="person"> + <email>dilfridge@gentoo.org</email> + <description>proxy-maintainer, please cc on bugs</description> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> BRL-CAD is a Combinatorial/Constructive Solid Geometry (CSG) solid modeling system that includes an interactive geometry editor, ray-tracing support for rendering and geometric analysis, @@ -29,12 +29,12 @@ Geometry (NMG) data structures for surface-based solid models and photon mapping. </longdescription> - <use> - <flag name="benchmarks"> + <use> + <flag name="benchmarks"> Run benchmarks during test phase (need test option enabled) </flag> - </use> - <upstream> - <remote-id type="sourceforge">brlcad</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="sourceforge">brlcad</remote-id> + </upstream> </pkgmetadata> diff --git a/media-gfx/librecad/metadata.xml b/media-gfx/librecad/metadata.xml index 83d16d787..d6b140c97 100644 --- a/media-gfx/librecad/metadata.xml +++ b/media-gfx/librecad/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>slis@gentoo.org</email> - </maintainer> - <use> - <flag name="3d">Require all 2D coordinates stored as 3D</flag> - <flag name="tools">Build additional tool programs: tff2lff</flag> - </use> - <upstream> - <remote-id type="github">LibreCAD/LibreCAD</remote-id> - </upstream> + <maintainer type="person"> + <email>slis@gentoo.org</email> + </maintainer> + <use> + <flag name="3d">Require all 2D coordinates stored as 3D</flag> + <flag name="tools">Build additional tool programs: tff2lff</flag> + </use> + <upstream> + <remote-id type="github">LibreCAD/LibreCAD</remote-id> + </upstream> </pkgmetadata> diff --git a/media-libs/avbin-bin/metadata.xml b/media-libs/avbin-bin/metadata.xml index f48f5eaa0..633797339 100644 --- a/media-libs/avbin-bin/metadata.xml +++ b/media-libs/avbin-bin/metadata.xml @@ -1,13 +1,13 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>grozin@gentoo.org</email> - <name>Andrey Grozin</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription>AVbin is a thin wrapper around FFmpeg</longdescription> + <maintainer type="person"> + <email>grozin@gentoo.org</email> + <name>Andrey Grozin</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>AVbin is a thin wrapper around FFmpeg</longdescription> </pkgmetadata> diff --git a/media-libs/glbinding/metadata.xml b/media-libs/glbinding/metadata.xml index 5f82e29cb..2fa046d66 100644 --- a/media-libs/glbinding/metadata.xml +++ b/media-libs/glbinding/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> glbinding leverages modern C++11 features like enum classes, lambdas, and variadic templates, instead of relying on macros; all OpenGL symbols are real functions and variables. It provides @@ -21,7 +21,7 @@ (gl.xml) glbinding is generated using python scripts and templates that can be easily adapted to fit custom needs. </longdescription> - <upstream> - <remote-id type="github">cginternals/glbinding</remote-id> - </upstream> + <upstream> + <remote-id type="github">cginternals/glbinding</remote-id> + </upstream> </pkgmetadata> diff --git a/net-ftp/bbftp-client/metadata.xml b/net-ftp/bbftp-client/metadata.xml index f80d23ed1..a5b1bdacc 100644 --- a/net-ftp/bbftp-client/metadata.xml +++ b/net-ftp/bbftp-client/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> bbFTP is a file transfer software. It implements its own transfer protocol, which is optimized for large files (larger than 2GB) and secure as it does not read the password in a file and encrypts the connection information. diff --git a/net-ftp/bbftp-server/metadata.xml b/net-ftp/bbftp-server/metadata.xml index f80d23ed1..a5b1bdacc 100644 --- a/net-ftp/bbftp-server/metadata.xml +++ b/net-ftp/bbftp-server/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> bbFTP is a file transfer software. It implements its own transfer protocol, which is optimized for large files (larger than 2GB) and secure as it does not read the password in a file and encrypts the connection information. diff --git a/net-misc/bbscp/metadata.xml b/net-misc/bbscp/metadata.xml index bde1b72a7..b398694d2 100644 --- a/net-misc/bbscp/metadata.xml +++ b/net-misc/bbscp/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> bbSCP is a wrapper that provides an SCP-like interface to bbFTP. </longdescription> </pkgmetadata> diff --git a/net-misc/cernbox-client/metadata.xml b/net-misc/cernbox-client/metadata.xml index 1a378d6f4..039060696 100644 --- a/net-misc/cernbox-client/metadata.xml +++ b/net-misc/cernbox-client/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> This service provides a cloud synchronisation service for all CERN users between personal devices (like a laptop) and a centrally-managed data storage. Available to all CERN users. This service provides synchronisation capabilities: @@ -16,12 +16,12 @@ The service is not suitable for critical-path activities like data acquisition, world-wide data distribution and massive batch processing. </longdescription> - <use> - <flag name="dolphin">Install the <pkg>kde-apps/dolphin</pkg> extension</flag> - <flag name="nautilus">Install the <pkg>gnome-base/nautilus</pkg> extension</flag> - <flag name="sftp">Enable sftp transfer support via <pkg>net-libs/libssh</pkg></flag> - </use> - <upstream> - <doc>http://cernbox.web.cern.ch/cernbox/00_getting_started/index.html</doc> - </upstream> + <use> + <flag name="dolphin">Install the <pkg>kde-apps/dolphin</pkg> extension</flag> + <flag name="nautilus">Install the <pkg>gnome-base/nautilus</pkg> extension</flag> + <flag name="sftp">Enable sftp transfer support via <pkg>net-libs/libssh</pkg></flag> + </use> + <upstream> + <doc>http://cernbox.web.cern.ch/cernbox/00_getting_started/index.html</doc> + </upstream> </pkgmetadata> diff --git a/perl-core/encoding-warnings/metadata.xml b/perl-core/encoding-warnings/metadata.xml index d7298d70a..90bb64f30 100644 --- a/perl-core/encoding-warnings/metadata.xml +++ b/perl-core/encoding-warnings/metadata.xml @@ -1,7 +1,7 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mail@akhuettel.de</email> - </maintainer> + <maintainer type="person"> + <email>mail@akhuettel.de</email> + </maintainer> </pkgmetadata> diff --git a/sci-astronomy/bpz/metadata.xml b/sci-astronomy/bpz/metadata.xml index 8eb205b89..b57d8eab6 100644 --- a/sci-astronomy/bpz/metadata.xml +++ b/sci-astronomy/bpz/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Bayesian Photometric Redshifts is a method to infere photometric redshifts of galaxies. </longdescription> diff --git a/sci-astronomy/eazy/metadata.xml b/sci-astronomy/eazy/metadata.xml index 277bb09c5..695876072 100644 --- a/sci-astronomy/eazy/metadata.xml +++ b/sci-astronomy/eazy/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Easy and Accurate Zphot from Yale is a photometric redshift code designed to produce high-quality redshifts from 0 to 4 for situations where complete spectroscopic calibration samples are not available. diff --git a/sci-astronomy/eye/metadata.xml b/sci-astronomy/eye/metadata.xml index 733ea2726..964c66ad9 100644 --- a/sci-astronomy/eye/metadata.xml +++ b/sci-astronomy/eye/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> In EyE (Enhance Your Extraction) an artificial neural network connected to pixels of a moving window (retina) is trained to associate these input stimuli to the corresponding response in one diff --git a/sci-astronomy/galfit-bin/metadata.xml b/sci-astronomy/galfit-bin/metadata.xml index d66d6253b..6b4fa6b4a 100644 --- a/sci-astronomy/galfit-bin/metadata.xml +++ b/sci-astronomy/galfit-bin/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> GALFIT is a data analysis algorithm that fits 2-D analytic functions to galaxies and point sources directly to digital images. </longdescription> diff --git a/sci-astronomy/lephare/metadata.xml b/sci-astronomy/lephare/metadata.xml index ccde13979..508212313 100644 --- a/sci-astronomy/lephare/metadata.xml +++ b/sci-astronomy/lephare/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Le Photometric Analysis for Redshift Estimate is a set of commands to compute photometric redshifts and to perform SED fitting. </longdescription> diff --git a/sci-astronomy/libthesky/metadata.xml b/sci-astronomy/libthesky/metadata.xml index 374f32bf7..1ce9631c7 100644 --- a/sci-astronomy/libthesky/metadata.xml +++ b/sci-astronomy/libthesky/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>AstroFloyd@gmail.com</email> - <name>AstroFloyd</name> - </maintainer> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">libthesky</remote-id> - </upstream> + <maintainer type="person"> + <email>AstroFloyd@gmail.com</email> + <name>AstroFloyd</name> + </maintainer> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">libthesky</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-astronomy/missfits/metadata.xml b/sci-astronomy/missfits/metadata.xml index 3a1cc2498..3115c8d55 100644 --- a/sci-astronomy/missfits/metadata.xml +++ b/sci-astronomy/missfits/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> MissFITS is a program that performs basic maintenance and packaging tasks on FITS files using an optimised FITS library. MissFITS can: * add/edit/remove FITS header keywords diff --git a/sci-astronomy/mosstack/metadata.xml b/sci-astronomy/mosstack/metadata.xml index df5606cca..570109a05 100644 --- a/sci-astronomy/mosstack/metadata.xml +++ b/sci-astronomy/mosstack/metadata.xml @@ -1,23 +1,23 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mikko.laine@gmail.com</email> - <name>Mikko Laine</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>mikko.laine@gmail.com</email> + <name>Mikko Laine</name> + </maintainer> + <longdescription> An open source stacking software for astronomical images taken with a DSLR camera. Mosstack can calibrate, debayer, register, align and stack photos taken with modern DSLR's from Canon. It has a command line user interface inspired by AstroSurf IRIS and a graphical user interface written with PyQt4 </longdescription> - <use> - <flag name="opencl">Enables OpenCL support and pulls in pyopencl. This makes + <use> + <flag name="opencl">Enables OpenCL support and pulls in pyopencl. This makes some operations much faster but requires specific hardware and drivers.</flag> - <flag name="qt4">Pulls in PyQt4. Program works on command line interface + <flag name="qt4">Pulls in PyQt4. Program works on command line interface without it but for GUI the library is required.</flag> - </use> - <upstream> - <remote-id type="bitbucket">mikko_laine/mosstack</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="bitbucket">mikko_laine/mosstack</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-astronomy/psfex/metadata.xml b/sci-astronomy/psfex/metadata.xml index 45b00a7e9..5121f0c8d 100644 --- a/sci-astronomy/psfex/metadata.xml +++ b/sci-astronomy/psfex/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> PSFEx (“PSF Extractor”) extracts models of the Point Spread Function (PSF) from FITS images processed with <pkg>sci-libs/sextractor</pkg>, and measures the quality of images. The generated PSF models can be used for model-fitting photometry or morphological analyses. </longdescription> -<use> - <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag> -</use> + <use> + <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag> + </use> </pkgmetadata> diff --git a/sci-astronomy/scamp/metadata.xml b/sci-astronomy/scamp/metadata.xml index d337960db..5b8a3c398 100644 --- a/sci-astronomy/scamp/metadata.xml +++ b/sci-astronomy/scamp/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> SCAMP computes astrometric and photometric solutions from SExtractor catalogs and stores them in header files. These headers files can be read by SWarp to coadd images. </longdescription> -<use> - <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag> -</use> + <use> + <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag> + </use> </pkgmetadata> diff --git a/sci-astronomy/sextractor/metadata.xml b/sci-astronomy/sextractor/metadata.xml index 87b74a0a9..651b20e47 100644 --- a/sci-astronomy/sextractor/metadata.xml +++ b/sci-astronomy/sextractor/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> -<email>sci-astronomy@gentoo.org</email> -<name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> SExtractor (Source Extractor) is a program that builds a catalogue of objects from an astronomical image. Although it is particularly oriented towards reduction of large scale galaxy-survey data, it @@ -13,10 +13,10 @@ ability to automatically separate stars and galaxy using neural networks. </longdescription> -<use> -<flag name="modelfit"> + <use> + <flag name="modelfit"> Enable profile model fitting, needs <pkg>sci-libs/atlas</pkg> and <pkg>sci-libs/fftw</pkg> </flag> -</use> + </use> </pkgmetadata> diff --git a/sci-astronomy/skymaker/metadata.xml b/sci-astronomy/skymaker/metadata.xml index a5fb71602..18cb8766d 100644 --- a/sci-astronomy/skymaker/metadata.xml +++ b/sci-astronomy/skymaker/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> SkyMaker is a program that simulates astronomical images. It accepts object lists in ASCII generated by the Stuff program to produce realistic astronomical fields. There are various options for the user: diff --git a/sci-astronomy/starlink-bin/metadata.xml b/sci-astronomy/starlink-bin/metadata.xml index 1d4be9081..111f0287a 100644 --- a/sci-astronomy/starlink-bin/metadata.xml +++ b/sci-astronomy/starlink-bin/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> The Starlink Project, referred to by users as Starlink and by developers as simply The Project, was a UK astronomical computing project which supplied general-purpose data reduction diff --git a/sci-astronomy/stiff/metadata.xml b/sci-astronomy/stiff/metadata.xml index 27ad43608..1ab3a27af 100644 --- a/sci-astronomy/stiff/metadata.xml +++ b/sci-astronomy/stiff/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> STIFF is a program that convert scientific FITS images to the more popular TIFF, in 8 (grayscale) or 24 (true colour: 3 times 8) bits per pixel. diff --git a/sci-astronomy/stilts/metadata.xml b/sci-astronomy/stilts/metadata.xml index 9a91a45ff..46b14de5c 100644 --- a/sci-astronomy/stilts/metadata.xml +++ b/sci-astronomy/stilts/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> The Starlink Tables Infrastructure Library Tool Set is a set of command-line tools based on STIL, the Starlink Tables Infrastructure Library. It deals with the processing of tabular data; the package diff --git a/sci-astronomy/stuff/metadata.xml b/sci-astronomy/stuff/metadata.xml index c3150e8cd..5970575e9 100644 --- a/sci-astronomy/stuff/metadata.xml +++ b/sci-astronomy/stuff/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Stuff is a program that simulates “perfect” astronomical catalogues. It generate object lists in ASCII which can read by the SkyMaker program to produce realistic astronomical fields. diff --git a/sci-astronomy/swarp/metadata.xml b/sci-astronomy/swarp/metadata.xml index 988b2feef..110a1fe70 100644 --- a/sci-astronomy/swarp/metadata.xml +++ b/sci-astronomy/swarp/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> SWarp takes astronomical FITS images with a WCS-like projection, resample and stack them all. </longdescription> diff --git a/sci-astronomy/topcat/metadata.xml b/sci-astronomy/topcat/metadata.xml index 70a38f517..4cf0383c9 100644 --- a/sci-astronomy/topcat/metadata.xml +++ b/sci-astronomy/topcat/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> Tool for OPerations on Catalogues And Tables is an interactive graphical viewer and editor for tabular data. Its aim is to provide most of the facilities that astronomers need for analysis and diff --git a/sci-astronomy/weightwatcher/metadata.xml b/sci-astronomy/weightwatcher/metadata.xml index 86c4c7dc6..26af98c3c 100644 --- a/sci-astronomy/weightwatcher/metadata.xml +++ b/sci-astronomy/weightwatcher/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> WeightWatcher is a program that combines weight-maps, flag-maps and polygon data in order to produce control maps which can directly be used in astronomical image-processing packages like Drizzle, diff --git a/sci-astronomy/zebra/metadata.xml b/sci-astronomy/zebra/metadata.xml index 76eebf20b..ba10176c2 100644 --- a/sci-astronomy/zebra/metadata.xml +++ b/sci-astronomy/zebra/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <longdescription lang="en"> The Zurich Extragalactic Bayesian Redshift Analyzer is a software to compute and analyze photometric redshifts of galaxies. ZEBRA combines and extends several of the classical approaches to diff --git a/sci-biology/ANGLE-bin/metadata.xml b/sci-biology/ANGLE-bin/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/ANGLE-bin/metadata.xml +++ b/sci-biology/ANGLE-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/AlignGraph/metadata.xml b/sci-biology/AlignGraph/metadata.xml index 7863f973a..ebfe51ec8 100644 --- a/sci-biology/AlignGraph/metadata.xml +++ b/sci-biology/AlignGraph/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">baoe/AlignGraph</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">baoe/AlignGraph</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Atlas-Link/metadata.xml b/sci-biology/Atlas-Link/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/Atlas-Link/metadata.xml +++ b/sci-biology/Atlas-Link/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/Atlas/metadata.xml b/sci-biology/Atlas/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/Atlas/metadata.xml +++ b/sci-biology/Atlas/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/Atlas2/metadata.xml b/sci-biology/Atlas2/metadata.xml index 4338746db..7e2e21ffd 100644 --- a/sci-biology/Atlas2/metadata.xml +++ b/sci-biology/Atlas2/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> Atlas2 is a next-generation sequencing suite of variant analysis tools specializing in the separation of true SNPs and insertions and deletions (indels) from sequencing and mapping errors in Whole Exome Capture Sequencing (WECS) data. </longdescription> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Atlas_GapFill/metadata.xml b/sci-biology/Atlas_GapFill/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/Atlas_GapFill/metadata.xml +++ b/sci-biology/Atlas_GapFill/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/BBmap/metadata.xml b/sci-biology/BBmap/metadata.xml index 75990319d..2ca43ff4d 100644 --- a/sci-biology/BBmap/metadata.xml +++ b/sci-biology/BBmap/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">bbmap</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">bbmap</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/BG7/metadata.xml b/sci-biology/BG7/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-biology/BG7/metadata.xml +++ b/sci-biology/BG7/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/BRAKER/metadata.xml b/sci-biology/BRAKER/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/BRAKER/metadata.xml +++ b/sci-biology/BRAKER/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/BRANCH/metadata.xml b/sci-biology/BRANCH/metadata.xml index ab90aa364..c2ec6485a 100644 --- a/sci-biology/BRANCH/metadata.xml +++ b/sci-biology/BRANCH/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">baoe/BRANCH</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">baoe/BRANCH</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/BamView/metadata.xml b/sci-biology/BamView/metadata.xml index ecc16433b..93e06748e 100644 --- a/sci-biology/BamView/metadata.xml +++ b/sci-biology/BamView/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">bamview</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">bamview</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/BlastToSam/metadata.xml b/sci-biology/BlastToSam/metadata.xml index 86bbb3764..5a3c7d51d 100644 --- a/sci-biology/BlastToSam/metadata.xml +++ b/sci-biology/BlastToSam/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">AstrorEnales/BlastToSam</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">AstrorEnales/BlastToSam</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/DisEMBL/metadata.xml b/sci-biology/DisEMBL/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/DisEMBL/metadata.xml +++ b/sci-biology/DisEMBL/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/EBARDenovo/metadata.xml b/sci-biology/EBARDenovo/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/EBARDenovo/metadata.xml +++ b/sci-biology/EBARDenovo/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/ESTate/metadata.xml b/sci-biology/ESTate/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ESTate/metadata.xml +++ b/sci-biology/ESTate/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/FLASH/metadata.xml b/sci-biology/FLASH/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/FLASH/metadata.xml +++ b/sci-biology/FLASH/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Fastaq/metadata.xml b/sci-biology/Fastaq/metadata.xml index 04b6bd54b..d5f0ab569 100644 --- a/sci-biology/Fastaq/metadata.xml +++ b/sci-biology/Fastaq/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">sanger-pathogens/Fastaq</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">sanger-pathogens/Fastaq</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/GAL/metadata.xml b/sci-biology/GAL/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/GAL/metadata.xml +++ b/sci-biology/GAL/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/Gambit/metadata.xml b/sci-biology/Gambit/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/Gambit/metadata.xml +++ b/sci-biology/Gambit/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ICC/metadata.xml b/sci-biology/ICC/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ICC/metadata.xml +++ b/sci-biology/ICC/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/IMAGE/metadata.xml b/sci-biology/IMAGE/metadata.xml index 3dcd782d1..9c059c62e 100644 --- a/sci-biology/IMAGE/metadata.xml +++ b/sci-biology/IMAGE/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">image2</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">image2</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/InterMine/metadata.xml b/sci-biology/InterMine/metadata.xml index 5c9c50b32..0114515a6 100644 --- a/sci-biology/InterMine/metadata.xml +++ b/sci-biology/InterMine/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">intermine/intermine</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">intermine/intermine</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/KING/metadata.xml b/sci-biology/KING/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/KING/metadata.xml +++ b/sci-biology/KING/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/KaKs_Calculator/metadata.xml b/sci-biology/KaKs_Calculator/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/KaKs_Calculator/metadata.xml +++ b/sci-biology/KaKs_Calculator/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/MaSuRCA/metadata.xml b/sci-biology/MaSuRCA/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/MaSuRCA/metadata.xml +++ b/sci-biology/MaSuRCA/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/MagicViewer/metadata.xml b/sci-biology/MagicViewer/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/MagicViewer/metadata.xml +++ b/sci-biology/MagicViewer/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/MeV/metadata.xml b/sci-biology/MeV/metadata.xml index 6ed96d4bc..bd7adb92f 100644 --- a/sci-biology/MeV/metadata.xml +++ b/sci-biology/MeV/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/MochiView/metadata.xml b/sci-biology/MochiView/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/MochiView/metadata.xml +++ b/sci-biology/MochiView/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/MolBioLib/metadata.xml b/sci-biology/MolBioLib/metadata.xml index cfa9e50ee..3b9e38617 100644 --- a/sci-biology/MolBioLib/metadata.xml +++ b/sci-biology/MolBioLib/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">molbiolib</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">molbiolib</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/MuSeqBox/metadata.xml b/sci-biology/MuSeqBox/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/MuSeqBox/metadata.xml +++ b/sci-biology/MuSeqBox/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/NGSTools/metadata.xml b/sci-biology/NGSTools/metadata.xml index fe6859dd7..642261079 100644 --- a/sci-biology/NGSTools/metadata.xml +++ b/sci-biology/NGSTools/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">ngsep</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">ngsep</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/OBO-Edit/metadata.xml b/sci-biology/OBO-Edit/metadata.xml index 115a34c41..acbbc35a4 100644 --- a/sci-biology/OBO-Edit/metadata.xml +++ b/sci-biology/OBO-Edit/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/ONTO-PERL/metadata.xml b/sci-biology/ONTO-PERL/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/ONTO-PERL/metadata.xml +++ b/sci-biology/ONTO-PERL/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ORFcor/metadata.xml b/sci-biology/ORFcor/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ORFcor/metadata.xml +++ b/sci-biology/ORFcor/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/RADtools/metadata.xml b/sci-biology/RADtools/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/RADtools/metadata.xml +++ b/sci-biology/RADtools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/RSeQC/metadata.xml b/sci-biology/RSeQC/metadata.xml index 54bdfb597..5c8442330 100644 --- a/sci-biology/RSeQC/metadata.xml +++ b/sci-biology/RSeQC/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">rseqc</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">rseqc</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Ray/metadata.xml b/sci-biology/Ray/metadata.xml index fb7092ff7..982286fb0 100644 --- a/sci-biology/Ray/metadata.xml +++ b/sci-biology/Ray/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/Rcorrector/metadata.xml b/sci-biology/Rcorrector/metadata.xml index 7cca6fb36..3d9746ae9 100644 --- a/sci-biology/Rcorrector/metadata.xml +++ b/sci-biology/Rcorrector/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">mourisl/Rcorrector</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">mourisl/Rcorrector</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/SEECER/metadata.xml b/sci-biology/SEECER/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/SEECER/metadata.xml +++ b/sci-biology/SEECER/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/SOAPdenovo2/metadata.xml b/sci-biology/SOAPdenovo2/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/SOAPdenovo2/metadata.xml +++ b/sci-biology/SOAPdenovo2/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/SPAdes/metadata.xml b/sci-biology/SPAdes/metadata.xml index 4baa30821..f1a8d4826 100644 --- a/sci-biology/SPAdes/metadata.xml +++ b/sci-biology/SPAdes/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> truSPAdes includes support for Illumina TruSeq Synthetic Long Read technology reads. hammer and ionhammer are read error correcting modules for Illumina /IonTorrent reads, resp. dipspades is assembly module for highly polymorphic diploid genomes diff --git a/sci-biology/SSAKE/metadata.xml b/sci-biology/SSAKE/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/SSAKE/metadata.xml +++ b/sci-biology/SSAKE/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/STAR/metadata.xml b/sci-biology/STAR/metadata.xml index f053775b5..1f2f45f25 100644 --- a/sci-biology/STAR/metadata.xml +++ b/sci-biology/STAR/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">alexdobin/STAR</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">alexdobin/STAR</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Scaffolder-evaluation/metadata.xml b/sci-biology/Scaffolder-evaluation/metadata.xml index ede9259b5..337db209e 100644 --- a/sci-biology/Scaffolder-evaluation/metadata.xml +++ b/sci-biology/Scaffolder-evaluation/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">martinghunt/Scaffolder-evaluation</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">martinghunt/Scaffolder-evaluation</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/SnpEff/metadata.xml b/sci-biology/SnpEff/metadata.xml index c7accda31..51896f0c1 100644 --- a/sci-biology/SnpEff/metadata.xml +++ b/sci-biology/SnpEff/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">snpeff</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">snpeff</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/SolexaQA/metadata.xml b/sci-biology/SolexaQA/metadata.xml index f7714240a..6196a9f60 100644 --- a/sci-biology/SolexaQA/metadata.xml +++ b/sci-biology/SolexaQA/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">solexaqa</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">solexaqa</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/StarORF/metadata.xml b/sci-biology/StarORF/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/StarORF/metadata.xml +++ b/sci-biology/StarORF/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/TransDecoder/metadata.xml b/sci-biology/TransDecoder/metadata.xml index 1a522bbe1..544c79e74 100644 --- a/sci-biology/TransDecoder/metadata.xml +++ b/sci-biology/TransDecoder/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">TransDecoder/TransDecoder</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">TransDecoder/TransDecoder</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/Trinotate/metadata.xml b/sci-biology/Trinotate/metadata.xml index b183ac8ee..eaf731f09 100644 --- a/sci-biology/Trinotate/metadata.xml +++ b/sci-biology/Trinotate/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">Trinotate/Trinotate</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">Trinotate/Trinotate</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/VarScan-bin/metadata.xml b/sci-biology/VarScan-bin/metadata.xml index 01850f614..eab817006 100644 --- a/sci-biology/VarScan-bin/metadata.xml +++ b/sci-biology/VarScan-bin/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">dkoboldt/varscan</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">dkoboldt/varscan</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/VarScan/metadata.xml b/sci-biology/VarScan/metadata.xml index c9cbb67e6..0ab7b8b95 100644 --- a/sci-biology/VarScan/metadata.xml +++ b/sci-biology/VarScan/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">dkoboldt/varscan</remote-id> - <remote-id type="sourceforge">varscan</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">dkoboldt/varscan</remote-id> + <remote-id type="sourceforge">varscan</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/VelvetOptimiser/metadata.xml b/sci-biology/VelvetOptimiser/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/VelvetOptimiser/metadata.xml +++ b/sci-biology/VelvetOptimiser/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/YASRA/metadata.xml b/sci-biology/YASRA/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/YASRA/metadata.xml +++ b/sci-biology/YASRA/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/abacas/metadata.xml b/sci-biology/abacas/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/abacas/metadata.xml +++ b/sci-biology/abacas/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/act-bin/metadata.xml b/sci-biology/act-bin/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/act-bin/metadata.xml +++ b/sci-biology/act-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/aghermann/metadata.xml b/sci-biology/aghermann/metadata.xml index b62282781..7d37ce2e8 100644 --- a/sci-biology/aghermann/metadata.xml +++ b/sci-biology/aghermann/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>johnhommer@gmail.com</email> - <name>Andrei Zavada</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>johnhommer@gmail.com</email> + <name>Andrei Zavada</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> Aghermann is a program designed around a common workflow in sleep-research, complete with scoring facility; cairo subpixel drawing on screen or to file; conventional PSD and EEG Micrcontinuity diff --git a/sci-biology/align_to_scf/metadata.xml b/sci-biology/align_to_scf/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/align_to_scf/metadata.xml +++ b/sci-biology/align_to_scf/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/amos/metadata.xml b/sci-biology/amos/metadata.xml index 5b2ca1a74..5c72bf01a 100644 --- a/sci-biology/amos/metadata.xml +++ b/sci-biology/amos/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> AMOS is collection of tools and class interfaces for the assembly of DNA sequencing reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contigging, and assembly manipulation </longdescription> - <upstream> - <remote-id type="sourceforge">amos</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">amos</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/ampliconnoise/metadata.xml b/sci-biology/ampliconnoise/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ampliconnoise/metadata.xml +++ b/sci-biology/ampliconnoise/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/angsd/metadata.xml b/sci-biology/angsd/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/angsd/metadata.xml +++ b/sci-biology/angsd/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ants/metadata.xml b/sci-biology/ants/metadata.xml index 71c2ce955..6f359a5c0 100644 --- a/sci-biology/ants/metadata.xml +++ b/sci-biology/ants/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription>ANTs extracts information from complex datasets that include imaging (Word Cloud). + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>ANTs extracts information from complex datasets that include imaging (Word Cloud). Paired with ANTsR (answer), ANTs is useful for managing, interpreting and visualizing multidimensional data. ANTs is popularly considered a state-of-the-art medical image registration and segmentation toolkit. ANTsR is an emerging tool supporting standardized multimodality image analysis. ANTs depends diff --git a/sci-biology/apollo/metadata.xml b/sci-biology/apollo/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/apollo/metadata.xml +++ b/sci-biology/apollo/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/arachne/metadata.xml b/sci-biology/arachne/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/arachne/metadata.xml +++ b/sci-biology/arachne/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/argo-bin/metadata.xml b/sci-biology/argo-bin/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/argo-bin/metadata.xml +++ b/sci-biology/argo-bin/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/argo/metadata.xml b/sci-biology/argo/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/argo/metadata.xml +++ b/sci-biology/argo/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/artemis/metadata.xml b/sci-biology/artemis/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/artemis/metadata.xml +++ b/sci-biology/artemis/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/assembly-stats/metadata.xml b/sci-biology/assembly-stats/metadata.xml index e528fb05f..33f80074b 100644 --- a/sci-biology/assembly-stats/metadata.xml +++ b/sci-biology/assembly-stats/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">martinghunt/assembly-stats</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">martinghunt/assembly-stats</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/atsas/metadata.xml b/sci-biology/atsas/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/atsas/metadata.xml +++ b/sci-biology/atsas/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/augustus/metadata.xml b/sci-biology/augustus/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/augustus/metadata.xml +++ b/sci-biology/augustus/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bam-readcount/metadata.xml b/sci-biology/bam-readcount/metadata.xml index 2f50f6cb0..4a0f6e04b 100644 --- a/sci-biology/bam-readcount/metadata.xml +++ b/sci-biology/bam-readcount/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">genome/bam-readcount</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">genome/bam-readcount</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/bambino/metadata.xml b/sci-biology/bambino/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/bambino/metadata.xml +++ b/sci-biology/bambino/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/bambus/metadata.xml b/sci-biology/bambus/metadata.xml index 1054fc1ed..6f58cca41 100644 --- a/sci-biology/bambus/metadata.xml +++ b/sci-biology/bambus/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/barnacle/metadata.xml b/sci-biology/barnacle/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/barnacle/metadata.xml +++ b/sci-biology/barnacle/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/barrnap/metadata.xml b/sci-biology/barrnap/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/barrnap/metadata.xml +++ b/sci-biology/barrnap/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/beagle/metadata.xml b/sci-biology/beagle/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/beagle/metadata.xml +++ b/sci-biology/beagle/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/beaglecall/metadata.xml b/sci-biology/beaglecall/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/beaglecall/metadata.xml +++ b/sci-biology/beaglecall/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bedops/metadata.xml b/sci-biology/bedops/metadata.xml index 275007996..5398e25bb 100644 --- a/sci-biology/bedops/metadata.xml +++ b/sci-biology/bedops/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">bedops/bedops</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">bedops/bedops</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/bfast/metadata.xml b/sci-biology/bfast/metadata.xml index 45f337087..b60dfbcbc 100644 --- a/sci-biology/bfast/metadata.xml +++ b/sci-biology/bfast/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">bfast</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">bfast</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/bio-cd-hit-report/metadata.xml b/sci-biology/bio-cd-hit-report/metadata.xml index ed211409a..becca79c5 100644 --- a/sci-biology/bio-cd-hit-report/metadata.xml +++ b/sci-biology/bio-cd-hit-report/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="rubygems">bio-cd-hit-report</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="rubygems">bio-cd-hit-report</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/biobambam/metadata.xml b/sci-biology/biobambam/metadata.xml index 38f3b45cf..25aa7fc17 100644 --- a/sci-biology/biobambam/metadata.xml +++ b/sci-biology/biobambam/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> This package contains some tools for processing BAM files including bamcollate2: reads BAM and writes BAM reordered such that alignment or collated by query name @@ -15,7 +15,7 @@ bamrecompress: reads BAM and writes BAM with a defined compression setting. This bamsort: reads BAM and writes BAM resorted by coordinates or query name bamtofastq: reads BAM and writes FastQ; output can be collated or uncollated by query name </longdescription> - <upstream> - <remote-id type="github">gt1/biobambam</remote-id> - </upstream> + <upstream> + <remote-id type="github">gt1/biobambam</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/biobambam2/metadata.xml b/sci-biology/biobambam2/metadata.xml index cb036d969..88dabed5a 100644 --- a/sci-biology/biobambam2/metadata.xml +++ b/sci-biology/biobambam2/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> This package contains some tools for processing BAM files including bamcollate2: reads BAM and writes BAM reordered such that alignment or collated by query name @@ -15,7 +15,7 @@ bamrecompress: reads BAM and writes BAM with a defined compression setting. This bamsort: reads BAM and writes BAM resorted by coordinates or query name bamtofastq: reads BAM and writes FastQ; output can be collated or uncollated by query name </longdescription> - <upstream> - <remote-id type="github">gt1/biobambam2</remote-id> - </upstream> + <upstream> + <remote-id type="github">gt1/biobambam2</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/biopieces/metadata.xml b/sci-biology/biopieces/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/biopieces/metadata.xml +++ b/sci-biology/biopieces/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bismark/metadata.xml b/sci-biology/bismark/metadata.xml index 00744d612..7fbe43fac 100644 --- a/sci-biology/bismark/metadata.xml +++ b/sci-biology/bismark/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>yanlinlin82@gmail.com</email> - <name>Linlin Yan</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>yanlinlin82@gmail.com</email> + <name>Linlin Yan</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> Bismark is a program to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step. The output can be easily imported into a genome viewer, such as SeqMonk, and enables a researcher diff --git a/sci-biology/blasr/metadata.xml b/sci-biology/blasr/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/blasr/metadata.xml +++ b/sci-biology/blasr/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/blat/metadata.xml b/sci-biology/blat/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/blat/metadata.xml +++ b/sci-biology/blat/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/blue/metadata.xml b/sci-biology/blue/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/blue/metadata.xml +++ b/sci-biology/blue/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/brat/metadata.xml b/sci-biology/brat/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/brat/metadata.xml +++ b/sci-biology/brat/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/brat_bw/metadata.xml b/sci-biology/brat_bw/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/brat_bw/metadata.xml +++ b/sci-biology/brat_bw/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/brat_nova/metadata.xml b/sci-biology/brat_nova/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/brat_nova/metadata.xml +++ b/sci-biology/brat_nova/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/bru2nii/metadata.xml b/sci-biology/bru2nii/metadata.xml index 90ef9367d..65fc7e751 100644 --- a/sci-biology/bru2nii/metadata.xml +++ b/sci-biology/bru2nii/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> This is a simple tool for converting Bruker ParaVision MRI data to the NIfTI file format. It includes both a drag-and-drop graphical interface (Bru2Nii) as well as a command line tool (Bru2). </longdescription> - <upstream> - <remote-id type="github">neurolabusc/Bru2Nii</remote-id> - </upstream> - <use> - <flag name="gui">Build graphical user interface</flag> - </use> + <upstream> + <remote-id type="github">neurolabusc/Bru2Nii</remote-id> + </upstream> + <use> + <flag name="gui">Build graphical user interface</flag> + </use> </pkgmetadata> diff --git a/sci-biology/bx-python/metadata.xml b/sci-biology/bx-python/metadata.xml index 8cdea5d5a..3e13342e3 100644 --- a/sci-biology/bx-python/metadata.xml +++ b/sci-biology/bx-python/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="bitbucket">james_taylor/bx-python</remote-id> - <remote-id type="pypi">bx-python</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="bitbucket">james_taylor/bx-python</remote-id> + <remote-id type="pypi">bx-python</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/caftools/metadata.xml b/sci-biology/caftools/metadata.xml index 81b61ad3b..ebb2f204c 100644 --- a/sci-biology/caftools/metadata.xml +++ b/sci-biology/caftools/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> CAF is a text format for describing sequence assemblies. It is acedb-compliant and is an extension of the ace-file format used earlier, but with support for base quality measures and a more extensive description of the Sequence data. diff --git a/sci-biology/cast-bin/metadata.xml b/sci-biology/cast-bin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/cast-bin/metadata.xml +++ b/sci-biology/cast-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cd-hit-auxtools/metadata.xml b/sci-biology/cd-hit-auxtools/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/cd-hit-auxtools/metadata.xml +++ b/sci-biology/cd-hit-auxtools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cd-hit/metadata.xml b/sci-biology/cd-hit/metadata.xml index 7f866330d..95aec8089 100644 --- a/sci-biology/cd-hit/metadata.xml +++ b/sci-biology/cd-hit/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/sci-biology/cdbfasta/metadata.xml b/sci-biology/cdbfasta/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/cdbfasta/metadata.xml +++ b/sci-biology/cdbfasta/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/cegma/metadata.xml b/sci-biology/cegma/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/cegma/metadata.xml +++ b/sci-biology/cegma/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cg-cat/metadata.xml b/sci-biology/cg-cat/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/cg-cat/metadata.xml +++ b/sci-biology/cg-cat/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cgview-bin/metadata.xml b/sci-biology/cgview-bin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/cgview-bin/metadata.xml +++ b/sci-biology/cgview-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/clover/metadata.xml b/sci-biology/clover/metadata.xml index cc4673633..770d40f6d 100644 --- a/sci-biology/clover/metadata.xml +++ b/sci-biology/clover/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>maintainer-wanted@gentoo.org</email> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>maintainer-wanted@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cluster/metadata.xml b/sci-biology/cluster/metadata.xml index 2c86135a2..dbca977f9 100644 --- a/sci-biology/cluster/metadata.xml +++ b/sci-biology/cluster/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>je_fro@gentoo.org</email> - <name>Jeff Gardner</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>je_fro@gentoo.org</email> + <name>Jeff Gardner</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> Cluster provides an interface to access methods of gene expression data analysis. </longdescription> diff --git a/sci-biology/clview/metadata.xml b/sci-biology/clview/metadata.xml index 31020917d..7adf609cd 100644 --- a/sci-biology/clview/metadata.xml +++ b/sci-biology/clview/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/cnrun/metadata.xml b/sci-biology/cnrun/metadata.xml index 1b2b557a9..7e97ca658 100644 --- a/sci-biology/cnrun/metadata.xml +++ b/sci-biology/cnrun/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>johnhommer@gmail.com</email> - <name>Andrei Zavada</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>johnhommer@gmail.com</email> + <name>Andrei Zavada</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription> CNrun is a neuronal network simulator, with these features: * a conductance- and rate-based Hodgkin-Huxley neurons, a Rall and diff --git a/sci-biology/codonw/metadata.xml b/sci-biology/codonw/metadata.xml index fcb129873..7cadd7d4c 100644 --- a/sci-biology/codonw/metadata.xml +++ b/sci-biology/codonw/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">codonw</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">codonw</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/conform-gt/metadata.xml b/sci-biology/conform-gt/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/conform-gt/metadata.xml +++ b/sci-biology/conform-gt/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/conifer/metadata.xml b/sci-biology/conifer/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/conifer/metadata.xml +++ b/sci-biology/conifer/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/conrad/metadata.xml b/sci-biology/conrad/metadata.xml index 8d38b0b1a..814dcabcc 100644 --- a/sci-biology/conrad/metadata.xml +++ b/sci-biology/conrad/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">conradcrf</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">conradcrf</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/consed2gap/metadata.xml b/sci-biology/consed2gap/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/consed2gap/metadata.xml +++ b/sci-biology/consed2gap/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/coral/metadata.xml b/sci-biology/coral/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/coral/metadata.xml +++ b/sci-biology/coral/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cortex_var/metadata.xml b/sci-biology/cortex_var/metadata.xml index aeef1bbec..a2867d6fd 100644 --- a/sci-biology/cortex_var/metadata.xml +++ b/sci-biology/cortex_var/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">cortexassembler</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">cortexassembler</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/cramtools/metadata.xml b/sci-biology/cramtools/metadata.xml index 0a1821f4a..5a55ad312 100644 --- a/sci-biology/cramtools/metadata.xml +++ b/sci-biology/cramtools/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">enasequence/cramtools</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">enasequence/cramtools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/cross_genome/metadata.xml b/sci-biology/cross_genome/metadata.xml index 18786886b..28cd3af39 100644 --- a/sci-biology/cross_genome/metadata.xml +++ b/sci-biology/cross_genome/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">phusion2</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">phusion2</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/cutadapt/metadata.xml b/sci-biology/cutadapt/metadata.xml index b6f11bf51..6099a3fab 100644 --- a/sci-biology/cutadapt/metadata.xml +++ b/sci-biology/cutadapt/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">marcelm/cutadapt</remote-id> - <remote-id type="pypi">cutadapt</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">marcelm/cutadapt</remote-id> + <remote-id type="pypi">cutadapt</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/dawg/metadata.xml b/sci-biology/dawg/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/dawg/metadata.xml +++ b/sci-biology/dawg/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/dcmstack/metadata.xml b/sci-biology/dcmstack/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-biology/dcmstack/metadata.xml +++ b/sci-biology/dcmstack/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/deeptools/metadata.xml b/sci-biology/deeptools/metadata.xml index ae7de7d62..a11dba65f 100644 --- a/sci-biology/deeptools/metadata.xml +++ b/sci-biology/deeptools/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">fidelram/deepTools</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">fidelram/deepTools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/dipy/metadata.xml b/sci-biology/dipy/metadata.xml index 23f050681..de88739b5 100644 --- a/sci-biology/dipy/metadata.xml +++ b/sci-biology/dipy/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Dipy is a free and open source software project for computational neuroanatomy, focusing mainly on diffusion magnetic resonance imaging (dMRI) analysis. It implements a broad range of algorithms for denoising, registration, reconstruction, tracking, clustering, visualization, and statistical analysis of MRI data. </longdescription> - <upstream> - <remote-id type="github">nipy/dipy</remote-id> - </upstream> + <upstream> + <remote-id type="github">nipy/dipy</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/discrover/metadata.xml b/sci-biology/discrover/metadata.xml index 1055813e9..90c7c21bc 100644 --- a/sci-biology/discrover/metadata.xml +++ b/sci-biology/discrover/metadata.xml @@ -1,28 +1,28 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jonas@maaskola.de</email> - <name>Jonas Maaskola</name> - </maintainer> - <use> - <flag name="cairo"> + <maintainer type="person"> + <email>jonas@maaskola.de</email> + <name>Jonas Maaskola</name> + </maintainer> + <use> + <flag name="cairo"> Use Cairo for sequence logo plotting capabilities </flag> - <flag name="dreme"> + <flag name="dreme"> Enable usage of DREME from the MEME package for seeding </flag> - <flag name="lto"> + <flag name="lto"> Compile with link-time optimization (LTO) </flag> - <flag name="misc_scripts"> + <flag name="misc_scripts"> Install miscellaneous scripts </flag> - <flag name="rmathlib"> + <flag name="rmathlib"> Link to the standalone Rmathlib for statistical routines </flag> - </use> - <upstream> - <remote-id type="github">maaskola/discrover</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="github">maaskola/discrover</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/dna2pep/metadata.xml b/sci-biology/dna2pep/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/dna2pep/metadata.xml +++ b/sci-biology/dna2pep/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ePCR/metadata.xml b/sci-biology/ePCR/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ePCR/metadata.xml +++ b/sci-biology/ePCR/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/edena/metadata.xml b/sci-biology/edena/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/edena/metadata.xml +++ b/sci-biology/edena/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ensembl-tools/metadata.xml b/sci-biology/ensembl-tools/metadata.xml index 2457da65b..7cd2955fb 100644 --- a/sci-biology/ensembl-tools/metadata.xml +++ b/sci-biology/ensembl-tools/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">Ensembl/ensembl-tools</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">Ensembl/ensembl-tools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/epga/metadata.xml b/sci-biology/epga/metadata.xml index 615525179..c0597b729 100644 --- a/sci-biology/epga/metadata.xml +++ b/sci-biology/epga/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">bioinfomaticsCSU/EPGA</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">bioinfomaticsCSU/EPGA</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/erpin/metadata.xml b/sci-biology/erpin/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/erpin/metadata.xml +++ b/sci-biology/erpin/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/est2assembly/metadata.xml b/sci-biology/est2assembly/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/est2assembly/metadata.xml +++ b/sci-biology/est2assembly/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/estscan/metadata.xml b/sci-biology/estscan/metadata.xml index 138f8c095..c79c2d1b5 100644 --- a/sci-biology/estscan/metadata.xml +++ b/sci-biology/estscan/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <use> - <flag name="icc">Undocumented USE</flag> - <flag name="ifc">Undocumented USE</flag> - </use> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <use> + <flag name="icc">Undocumented USE</flag> + <flag name="ifc">Undocumented USE</flag> + </use> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/eugene/metadata.xml b/sci-biology/eugene/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/eugene/metadata.xml +++ b/sci-biology/eugene/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/eval/metadata.xml b/sci-biology/eval/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/eval/metadata.xml +++ b/sci-biology/eval/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/exomiser-bin/metadata.xml b/sci-biology/exomiser-bin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/exomiser-bin/metadata.xml +++ b/sci-biology/exomiser-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/exonerate-gff3/metadata.xml b/sci-biology/exonerate-gff3/metadata.xml index 378558dab..34cada23a 100644 --- a/sci-biology/exonerate-gff3/metadata.xml +++ b/sci-biology/exonerate-gff3/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <use> - <flag name="utils">Unknown</flag> - </use> - <upstream> - <remote-id type="github">hotdogee/exonerate-gff3</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <use> + <flag name="utils">Unknown</flag> + </use> + <upstream> + <remote-id type="github">hotdogee/exonerate-gff3</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/fastdnaml/metadata.xml b/sci-biology/fastdnaml/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/fastdnaml/metadata.xml +++ b/sci-biology/fastdnaml/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/fastqc/metadata.xml b/sci-biology/fastqc/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/fastqc/metadata.xml +++ b/sci-biology/fastqc/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/fastx_toolkit/metadata.xml b/sci-biology/fastx_toolkit/metadata.xml index 4db9d1693..880cea016 100644 --- a/sci-biology/fastx_toolkit/metadata.xml +++ b/sci-biology/fastx_toolkit/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">agordon/fastx_toolkit</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">agordon/fastx_toolkit</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/ffindex/metadata.xml b/sci-biology/ffindex/metadata.xml index 18e09466d..138cb7705 100644 --- a/sci-biology/ffindex/metadata.xml +++ b/sci-biology/ffindex/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/fgap-bin/metadata.xml b/sci-biology/fgap-bin/metadata.xml index 59e8a4413..b53e13d28 100644 --- a/sci-biology/fgap-bin/metadata.xml +++ b/sci-biology/fgap-bin/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">fgap</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">fgap</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/fgap/metadata.xml b/sci-biology/fgap/metadata.xml index 59e8a4413..b53e13d28 100644 --- a/sci-biology/fgap/metadata.xml +++ b/sci-biology/fgap/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">fgap</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">fgap</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/flexbar/metadata.xml b/sci-biology/flexbar/metadata.xml index adfdd237a..e449a61d2 100644 --- a/sci-biology/flexbar/metadata.xml +++ b/sci-biology/flexbar/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/freebayes/metadata.xml b/sci-biology/freebayes/metadata.xml index fdd189bd5..493885416 100644 --- a/sci-biology/freebayes/metadata.xml +++ b/sci-biology/freebayes/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">ekg/freebayes</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">ekg/freebayes</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/fsa/metadata.xml b/sci-biology/fsa/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/fsa/metadata.xml +++ b/sci-biology/fsa/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/full_lengther_next/metadata.xml b/sci-biology/full_lengther_next/metadata.xml index 18e09466d..138cb7705 100644 --- a/sci-biology/full_lengther_next/metadata.xml +++ b/sci-biology/full_lengther_next/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/gap2caf/metadata.xml b/sci-biology/gap2caf/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/gap2caf/metadata.xml +++ b/sci-biology/gap2caf/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/gatk/metadata.xml b/sci-biology/gatk/metadata.xml index baaa7e21c..5a54c7fec 100644 --- a/sci-biology/gatk/metadata.xml +++ b/sci-biology/gatk/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">broadgsa/gatk</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">broadgsa/gatk</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/gemini/metadata.xml b/sci-biology/gemini/metadata.xml index 745bce5e5..260a8b4ae 100644 --- a/sci-biology/gemini/metadata.xml +++ b/sci-biology/gemini/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">arq5x/gemini</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">arq5x/gemini</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/geneid/metadata.xml b/sci-biology/geneid/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/geneid/metadata.xml +++ b/sci-biology/geneid/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/genepop/metadata.xml b/sci-biology/genepop/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/genepop/metadata.xml +++ b/sci-biology/genepop/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/generecon/metadata.xml b/sci-biology/generecon/metadata.xml index ba3b7651b..de97c87f7 100644 --- a/sci-biology/generecon/metadata.xml +++ b/sci-biology/generecon/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>lucas.chiesa@gmail.com</email> - <name>Lucas Chiesa</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>lucas.chiesa@gmail.com</email> + <name>Lucas Chiesa</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/genometools/metadata.xml b/sci-biology/genometools/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/genometools/metadata.xml +++ b/sci-biology/genometools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/genomeview-bin/metadata.xml b/sci-biology/genomeview-bin/metadata.xml index 6646b4398..0f267b755 100644 --- a/sci-biology/genomeview-bin/metadata.xml +++ b/sci-biology/genomeview-bin/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/germline/metadata.xml b/sci-biology/germline/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/germline/metadata.xml +++ b/sci-biology/germline/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/gfftools/metadata.xml b/sci-biology/gfftools/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/gfftools/metadata.xml +++ b/sci-biology/gfftools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/gffutils/metadata.xml b/sci-biology/gffutils/metadata.xml index 154685621..c9fe23ced 100644 --- a/sci-biology/gffutils/metadata.xml +++ b/sci-biology/gffutils/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">daler/gffutils</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">daler/gffutils</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/glean/metadata.xml b/sci-biology/glean/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/glean/metadata.xml +++ b/sci-biology/glean/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/gmap/metadata.xml b/sci-biology/gmap/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/gmap/metadata.xml +++ b/sci-biology/gmap/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/grabix/metadata.xml b/sci-biology/grabix/metadata.xml index 5ad9ab32c..eeafbb654 100644 --- a/sci-biology/grabix/metadata.xml +++ b/sci-biology/grabix/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">arq5x/grabix</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">arq5x/grabix</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/graf-bin/metadata.xml b/sci-biology/graf-bin/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/graf-bin/metadata.xml +++ b/sci-biology/graf-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/grass/metadata.xml b/sci-biology/grass/metadata.xml index 8563b702d..b4153fae5 100644 --- a/sci-biology/grass/metadata.xml +++ b/sci-biology/grass/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">AlexeyG/GRASS</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">AlexeyG/GRASS</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/hexamer/metadata.xml b/sci-biology/hexamer/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/hexamer/metadata.xml +++ b/sci-biology/hexamer/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/hisat2/metadata.xml b/sci-biology/hisat2/metadata.xml index b28711aa3..2a70cba7e 100644 --- a/sci-biology/hisat2/metadata.xml +++ b/sci-biology/hisat2/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">infphilo/hisat2</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">infphilo/hisat2</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/hts-python/metadata.xml b/sci-biology/hts-python/metadata.xml index 39221baa1..ac270e09b 100644 --- a/sci-biology/hts-python/metadata.xml +++ b/sci-biology/hts-python/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">brentp/hts-python</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">brentp/hts-python</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/hydra-sv/metadata.xml b/sci-biology/hydra-sv/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-biology/hydra-sv/metadata.xml +++ b/sci-biology/hydra-sv/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/idba/metadata.xml b/sci-biology/idba/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/idba/metadata.xml +++ b/sci-biology/idba/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/igv/metadata.xml b/sci-biology/igv/metadata.xml index 94761dc0e..8b6e6434a 100644 --- a/sci-biology/igv/metadata.xml +++ b/sci-biology/igv/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">broadinstitute/IGV</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">broadinstitute/IGV</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/imagej/metadata.xml b/sci-biology/imagej/metadata.xml index 4f14b2e58..ca2867d8c 100644 --- a/sci-biology/imagej/metadata.xml +++ b/sci-biology/imagej/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <use> - <flag name="plugins">Install additional plugins</flag> - </use> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <use> + <flag name="plugins">Install additional plugins</flag> + </use> </pkgmetadata> diff --git a/sci-biology/jannovar-bin/metadata.xml b/sci-biology/jannovar-bin/metadata.xml index faceb6e46..5e4e28811 100644 --- a/sci-biology/jannovar-bin/metadata.xml +++ b/sci-biology/jannovar-bin/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">charite/jannovar</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">charite/jannovar</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/jannovar/metadata.xml b/sci-biology/jannovar/metadata.xml index faceb6e46..5e4e28811 100644 --- a/sci-biology/jannovar/metadata.xml +++ b/sci-biology/jannovar/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">charite/jannovar</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">charite/jannovar</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/jellyfish/metadata.xml b/sci-biology/jellyfish/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/jellyfish/metadata.xml +++ b/sci-biology/jellyfish/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/jigsaw/metadata.xml b/sci-biology/jigsaw/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/jigsaw/metadata.xml +++ b/sci-biology/jigsaw/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/jtreeview-bin/metadata.xml b/sci-biology/jtreeview-bin/metadata.xml index 40552f721..ce99cfe6c 100644 --- a/sci-biology/jtreeview-bin/metadata.xml +++ b/sci-biology/jtreeview-bin/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">jtreeview</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">jtreeview</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/jtreeview/metadata.xml b/sci-biology/jtreeview/metadata.xml index 8dddf1715..5139daeeb 100644 --- a/sci-biology/jtreeview/metadata.xml +++ b/sci-biology/jtreeview/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="bitbucket">TreeView3Dev/treeview3</remote-id> - <remote-id type="sourceforge">jtreeview</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="bitbucket">TreeView3Dev/treeview3</remote-id> + <remote-id type="sourceforge">jtreeview</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/karect/metadata.xml b/sci-biology/karect/metadata.xml index 0ac12d618..de13610d5 100644 --- a/sci-biology/karect/metadata.xml +++ b/sci-biology/karect/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">aminallam/karect</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">aminallam/karect</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/kat/metadata.xml b/sci-biology/kat/metadata.xml index 5561548a6..6810aabae 100644 --- a/sci-biology/kat/metadata.xml +++ b/sci-biology/kat/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">TGAC/KAT</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">TGAC/KAT</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/khmer/metadata.xml b/sci-biology/khmer/metadata.xml index 7587454ae..91ed395d8 100644 --- a/sci-biology/khmer/metadata.xml +++ b/sci-biology/khmer/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">ged-lab/khmer</remote-id> - <remote-id type="pypi">khmer</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">ged-lab/khmer</remote-id> + <remote-id type="pypi">khmer</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/kmergenie/metadata.xml b/sci-biology/kmergenie/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/kmergenie/metadata.xml +++ b/sci-biology/kmergenie/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/kraken/metadata.xml b/sci-biology/kraken/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/kraken/metadata.xml +++ b/sci-biology/kraken/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/last/metadata.xml b/sci-biology/last/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/last/metadata.xml +++ b/sci-biology/last/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/lastz/metadata.xml b/sci-biology/lastz/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/lastz/metadata.xml +++ b/sci-biology/lastz/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/libBigWig/metadata.xml b/sci-biology/libBigWig/metadata.xml index dafe9d1fd..526198d16 100644 --- a/sci-biology/libBigWig/metadata.xml +++ b/sci-biology/libBigWig/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">dpryan79/libBigWig</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">dpryan79/libBigWig</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/libgtextutils/metadata.xml b/sci-biology/libgtextutils/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/libgtextutils/metadata.xml +++ b/sci-biology/libgtextutils/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/lighter/metadata.xml b/sci-biology/lighter/metadata.xml index ac43ed281..004e937aa 100644 --- a/sci-biology/lighter/metadata.xml +++ b/sci-biology/lighter/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">mourisl/Lighter</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">mourisl/Lighter</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/lucy/metadata.xml b/sci-biology/lucy/metadata.xml index b349fc682..4aca9ee62 100644 --- a/sci-biology/lucy/metadata.xml +++ b/sci-biology/lucy/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/lumpy-sv/metadata.xml b/sci-biology/lumpy-sv/metadata.xml index 27a0e1f28..5de3a3055 100644 --- a/sci-biology/lumpy-sv/metadata.xml +++ b/sci-biology/lumpy-sv/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">arq5x/lumpy-sv</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">arq5x/lumpy-sv</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/mRNAmarkup/metadata.xml b/sci-biology/mRNAmarkup/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/mRNAmarkup/metadata.xml +++ b/sci-biology/mRNAmarkup/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/maker/metadata.xml b/sci-biology/maker/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/maker/metadata.xml +++ b/sci-biology/maker/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/manatee-igs/metadata.xml b/sci-biology/manatee-igs/metadata.xml index 0318851d4..8a3d26043 100644 --- a/sci-biology/manatee-igs/metadata.xml +++ b/sci-biology/manatee-igs/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">manatee</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">manatee</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/manatee-jcvi/metadata.xml b/sci-biology/manatee-jcvi/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/manatee-jcvi/metadata.xml +++ b/sci-biology/manatee-jcvi/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/mavid/metadata.xml b/sci-biology/mavid/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/mavid/metadata.xml +++ b/sci-biology/mavid/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/megahit/metadata.xml b/sci-biology/megahit/metadata.xml index deaf720d8..bbab8b46d 100644 --- a/sci-biology/megahit/metadata.xml +++ b/sci-biology/megahit/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">voutcn/megahit</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">voutcn/megahit</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/merlin/metadata.xml b/sci-biology/merlin/metadata.xml index affa6b40c..8417d1580 100644 --- a/sci-biology/merlin/metadata.xml +++ b/sci-biology/merlin/metadata.xml @@ -5,4 +5,4 @@ <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> - </pkgmetadata> +</pkgmetadata> diff --git a/sci-biology/metaseq/metadata.xml b/sci-biology/metaseq/metadata.xml index 2e63b6ca2..64cf80c39 100644 --- a/sci-biology/metaseq/metadata.xml +++ b/sci-biology/metaseq/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">daler/metaseq</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">daler/metaseq</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/mgblast/metadata.xml b/sci-biology/mgblast/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/mgblast/metadata.xml +++ b/sci-biology/mgblast/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/minced/metadata.xml b/sci-biology/minced/metadata.xml index 6b04ebb8e..f7601e7b0 100644 --- a/sci-biology/minced/metadata.xml +++ b/sci-biology/minced/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">ctSkennerton/minced</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">ctSkennerton/minced</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/mip-scaffolder/metadata.xml b/sci-biology/mip-scaffolder/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/mip-scaffolder/metadata.xml +++ b/sci-biology/mip-scaffolder/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mira/metadata.xml b/sci-biology/mira/metadata.xml index 737f0bbc5..65cad0432 100644 --- a/sci-biology/mira/metadata.xml +++ b/sci-biology/mira/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">mira-assembler</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">mira-assembler</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/miranda/metadata.xml b/sci-biology/miranda/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/miranda/metadata.xml +++ b/sci-biology/miranda/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/mne-python/metadata.xml b/sci-biology/mne-python/metadata.xml index 8b53ad0cd..d9ac16118 100644 --- a/sci-biology/mne-python/metadata.xml +++ b/sci-biology/mne-python/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">mne-tools/mne-python</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">mne-tools/mne-python</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/mothur/metadata.xml b/sci-biology/mothur/metadata.xml index 9afdf8282..e29003407 100644 --- a/sci-biology/mothur/metadata.xml +++ b/sci-biology/mothur/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">mothur/mothur</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">mothur/mothur</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/mreps/metadata.xml b/sci-biology/mreps/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/mreps/metadata.xml +++ b/sci-biology/mreps/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/mrfast/metadata.xml b/sci-biology/mrfast/metadata.xml index cf3225665..3fe42d362 100644 --- a/sci-biology/mrfast/metadata.xml +++ b/sci-biology/mrfast/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">mrfast</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">mrfast</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/mrsfast/metadata.xml b/sci-biology/mrsfast/metadata.xml index 07ae0c655..309390097 100644 --- a/sci-biology/mrsfast/metadata.xml +++ b/sci-biology/mrsfast/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">mrsfast</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">mrsfast</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/msautil/metadata.xml b/sci-biology/msautil/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/msautil/metadata.xml +++ b/sci-biology/msautil/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/nanopolish/metadata.xml b/sci-biology/nanopolish/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/nanopolish/metadata.xml +++ b/sci-biology/nanopolish/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ncbi-blast+/metadata.xml b/sci-biology/ncbi-blast+/metadata.xml index 8f9041e1f..93556eaa7 100644 --- a/sci-biology/ncbi-blast+/metadata.xml +++ b/sci-biology/ncbi-blast+/metadata.xml @@ -1,23 +1,23 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <use> - <flag name="boost">Undocumented USE</flag> - <flag name="cppunit">Undocumented USE</flag> - <flag name="freetype">Undocumented USE</flag> - <flag name="mesa">Undocumented USE</flag> - <flag name="muparser">Undocumented USE</flag> - <flag name="sablotron">Undocumented USE</flag> - <flag name="xerces">Undocumented USE</flag> - <flag name="xalan">Undocumented USE</flag> - <flag name="xslt">Undocumented USE</flag> - </use> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <use> + <flag name="boost">Undocumented USE</flag> + <flag name="cppunit">Undocumented USE</flag> + <flag name="freetype">Undocumented USE</flag> + <flag name="mesa">Undocumented USE</flag> + <flag name="muparser">Undocumented USE</flag> + <flag name="sablotron">Undocumented USE</flag> + <flag name="xerces">Undocumented USE</flag> + <flag name="xalan">Undocumented USE</flag> + <flag name="xslt">Undocumented USE</flag> + </use> </pkgmetadata> diff --git a/sci-biology/ncbi-genome-download/metadata.xml b/sci-biology/ncbi-genome-download/metadata.xml index da3901ed3..0bd027def 100644 --- a/sci-biology/ncbi-genome-download/metadata.xml +++ b/sci-biology/ncbi-genome-download/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>freeh4cker@gmail.com</email> - <name>Bertrand Néron</name> - </maintainer> - <longdescription>Scripts to download genomes from the NCBI FTP servers.</longdescription> - <upstream> - <remote-id type="github">kblin/ncbi-genome-download</remote-id> - </upstream> + <maintainer type="person"> + <email>freeh4cker@gmail.com</email> + <name>Bertrand Néron</name> + </maintainer> + <longdescription>Scripts to download genomes from the NCBI FTP servers.</longdescription> + <upstream> + <remote-id type="github">kblin/ncbi-genome-download</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/ncbi-tools++/metadata.xml b/sci-biology/ncbi-tools++/metadata.xml index 27b1bf191..fbf79d9b7 100644 --- a/sci-biology/ncbi-tools++/metadata.xml +++ b/sci-biology/ncbi-tools++/metadata.xml @@ -1,19 +1,19 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <use> - <flag name="boost">Undocumented USE</flag> - <flag name="cppunit">Undocumented USE</flag> - <flag name="freetype">Undocumented USE</flag> - <flag name="mesa">Undocumented USE</flag> - <flag name="muparser">Undocumented USE</flag> - <flag name="sablotron">Undocumented USE</flag> - <flag name="xerces">Undocumented USE</flag> - <flag name="xalan">Undocumented USE</flag> - <flag name="xslt">Undocumented USE</flag> - </use> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <use> + <flag name="boost">Undocumented USE</flag> + <flag name="cppunit">Undocumented USE</flag> + <flag name="freetype">Undocumented USE</flag> + <flag name="mesa">Undocumented USE</flag> + <flag name="muparser">Undocumented USE</flag> + <flag name="sablotron">Undocumented USE</flag> + <flag name="xerces">Undocumented USE</flag> + <flag name="xalan">Undocumented USE</flag> + <flag name="xslt">Undocumented USE</flag> + </use> </pkgmetadata> diff --git a/sci-biology/nesoni/metadata.xml b/sci-biology/nesoni/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/nesoni/metadata.xml +++ b/sci-biology/nesoni/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ngsview/metadata.xml b/sci-biology/ngsview/metadata.xml index e8c46ee7f..2e918aae9 100644 --- a/sci-biology/ngsview/metadata.xml +++ b/sci-biology/ngsview/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">projects</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">projects</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/nilearn/metadata.xml b/sci-biology/nilearn/metadata.xml index 2730ad207..983b74350 100644 --- a/sci-biology/nilearn/metadata.xml +++ b/sci-biology/nilearn/metadata.xml @@ -1,24 +1,24 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Nilearn is a Python module for fast and easy statistical learning on NeuroImaging data. It leverages the scikit-learn Python toolbox for multivariate statistics with applications such as predictive modelling, classification, decoding, or connectivity analysis. </longdescription> - <use> - <flag name="plot">Adds optional dependency needed for plotting function subset.</flag> - </use> - <upstream> - <remote-id type="github">nilearn/nilearn</remote-id> - <remote-id type="pypi">nilearn</remote-id> - </upstream> + <use> + <flag name="plot">Adds optional dependency needed for plotting function subset.</flag> + </use> + <upstream> + <remote-id type="github">nilearn/nilearn</remote-id> + <remote-id type="pypi">nilearn</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/nistats/metadata.xml b/sci-biology/nistats/metadata.xml index 03cd738dc..b438f4409 100644 --- a/sci-biology/nistats/metadata.xml +++ b/sci-biology/nistats/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Nistats is a Python module for fast and easy modeling and statistical analysis of functional Magnetic Resonance Imaging data. </longdescription> diff --git a/sci-biology/nitime/metadata.xml b/sci-biology/nitime/metadata.xml index 1ed613b50..549788bdf 100644 --- a/sci-biology/nitime/metadata.xml +++ b/sci-biology/nitime/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/nrcl/metadata.xml b/sci-biology/nrcl/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/nrcl/metadata.xml +++ b/sci-biology/nrcl/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/nwalign/metadata.xml b/sci-biology/nwalign/metadata.xml index d5c7b72f2..e593c9312 100644 --- a/sci-biology/nwalign/metadata.xml +++ b/sci-biology/nwalign/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="pypi">nwalign</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="pypi">nwalign</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/nxtrim/metadata.xml b/sci-biology/nxtrim/metadata.xml index b4b118dab..314a02e57 100644 --- a/sci-biology/nxtrim/metadata.xml +++ b/sci-biology/nxtrim/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">sequencing/NxTrim</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">sequencing/NxTrim</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/oases/metadata.xml b/sci-biology/oases/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/oases/metadata.xml +++ b/sci-biology/oases/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/oncotator/metadata.xml b/sci-biology/oncotator/metadata.xml index 4f2a2f45a..7b9024751 100644 --- a/sci-biology/oncotator/metadata.xml +++ b/sci-biology/oncotator/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">broadinstitute/oncotator</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">broadinstitute/oncotator</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/pairagon/metadata.xml b/sci-biology/pairagon/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/pairagon/metadata.xml +++ b/sci-biology/pairagon/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/parafly/metadata.xml b/sci-biology/parafly/metadata.xml index f818cb27f..f1d59164e 100644 --- a/sci-biology/parafly/metadata.xml +++ b/sci-biology/parafly/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">transdecoder</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">transdecoder</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/pb-honey/metadata.xml b/sci-biology/pb-honey/metadata.xml index 69f227c89..1b533d8a5 100644 --- a/sci-biology/pb-honey/metadata.xml +++ b/sci-biology/pb-honey/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">pb-jelly</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">pb-jelly</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/pb-jelly/metadata.xml b/sci-biology/pb-jelly/metadata.xml index 69f227c89..1b533d8a5 100644 --- a/sci-biology/pb-jelly/metadata.xml +++ b/sci-biology/pb-jelly/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">pb-jelly</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">pb-jelly</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/perga/metadata.xml b/sci-biology/perga/metadata.xml index be641f1a0..5a6149667 100644 --- a/sci-biology/perga/metadata.xml +++ b/sci-biology/perga/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">hitbio/PERGA</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">hitbio/PERGA</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/perlprimer/metadata.xml b/sci-biology/perlprimer/metadata.xml index 63c8e8be8..b0041dc1f 100644 --- a/sci-biology/perlprimer/metadata.xml +++ b/sci-biology/perlprimer/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">perlprimer</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">perlprimer</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/phusion/metadata.xml b/sci-biology/phusion/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/phusion/metadata.xml +++ b/sci-biology/phusion/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/phusion2/metadata.xml b/sci-biology/phusion2/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/phusion2/metadata.xml +++ b/sci-biology/phusion2/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/picard/metadata.xml b/sci-biology/picard/metadata.xml index c316dd522..1d81f108f 100644 --- a/sci-biology/picard/metadata.xml +++ b/sci-biology/picard/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-biology/pileup/metadata.xml b/sci-biology/pileup/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/pileup/metadata.xml +++ b/sci-biology/pileup/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/plinkseq/metadata.xml b/sci-biology/plinkseq/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/plinkseq/metadata.xml +++ b/sci-biology/plinkseq/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/polyphen/metadata.xml b/sci-biology/polyphen/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/polyphen/metadata.xml +++ b/sci-biology/polyphen/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/poretools/metadata.xml b/sci-biology/poretools/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/poretools/metadata.xml +++ b/sci-biology/poretools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/portrait/metadata.xml b/sci-biology/portrait/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/portrait/metadata.xml +++ b/sci-biology/portrait/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/primerD/metadata.xml b/sci-biology/primerD/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/primerD/metadata.xml +++ b/sci-biology/primerD/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/prinseq-lite/metadata.xml b/sci-biology/prinseq-lite/metadata.xml index d5c8298fe..3b733f69d 100644 --- a/sci-biology/prinseq-lite/metadata.xml +++ b/sci-biology/prinseq-lite/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">prinseq</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">prinseq</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/proda/metadata.xml b/sci-biology/proda/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/proda/metadata.xml +++ b/sci-biology/proda/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/prokka/metadata.xml b/sci-biology/prokka/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/prokka/metadata.xml +++ b/sci-biology/prokka/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/prot4EST/metadata.xml b/sci-biology/prot4EST/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/prot4EST/metadata.xml +++ b/sci-biology/prot4EST/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/psx/metadata.xml b/sci-biology/psx/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/psx/metadata.xml +++ b/sci-biology/psx/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/psychopy/metadata.xml b/sci-biology/psychopy/metadata.xml index e15c9ad62..2c3fbd8bb 100644 --- a/sci-biology/psychopy/metadata.xml +++ b/sci-biology/psychopy/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <upstream> - <remote-id type="github">psychopy/psychopy</remote-id> - </upstream> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <upstream> + <remote-id type="github">psychopy/psychopy</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/pvmsx/metadata.xml b/sci-biology/pvmsx/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/pvmsx/metadata.xml +++ b/sci-biology/pvmsx/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/pybedtools/metadata.xml b/sci-biology/pybedtools/metadata.xml index 1e65e6b61..b80afba97 100644 --- a/sci-biology/pybedtools/metadata.xml +++ b/sci-biology/pybedtools/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">daler/pybedtools</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">daler/pybedtools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/pybrain/metadata.xml b/sci-biology/pybrain/metadata.xml index 0ac4c31dd..a5d6d4bfc 100644 --- a/sci-biology/pybrain/metadata.xml +++ b/sci-biology/pybrain/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">pybrain/pybrain</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">pybrain/pybrain</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/pyfaidx/metadata.xml b/sci-biology/pyfaidx/metadata.xml index d12d54610..fd0f24633 100644 --- a/sci-biology/pyfaidx/metadata.xml +++ b/sci-biology/pyfaidx/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="pypi">pyfaidx</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="pypi">pyfaidx</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/pysamstats/metadata.xml b/sci-biology/pysamstats/metadata.xml index 1bd906efe..cc923c1df 100644 --- a/sci-biology/pysamstats/metadata.xml +++ b/sci-biology/pysamstats/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">alimanfoo/pysamstats</remote-id> - <remote-id type="pypi">pysamstats</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">alimanfoo/pysamstats</remote-id> + <remote-id type="pypi">pysamstats</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/pysurfer/metadata.xml b/sci-biology/pysurfer/metadata.xml index 35df4a292..e4897b79c 100644 --- a/sci-biology/pysurfer/metadata.xml +++ b/sci-biology/pysurfer/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">nipy/PySurfer</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">nipy/PySurfer</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/quast/metadata.xml b/sci-biology/quast/metadata.xml index c275f1f78..c821b722e 100644 --- a/sci-biology/quast/metadata.xml +++ b/sci-biology/quast/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">quast</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">quast</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/quicktree/metadata.xml b/sci-biology/quicktree/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/quicktree/metadata.xml +++ b/sci-biology/quicktree/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/quorum/metadata.xml b/sci-biology/quorum/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/quorum/metadata.xml +++ b/sci-biology/quorum/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/reaper/metadata.xml b/sci-biology/reaper/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/reaper/metadata.xml +++ b/sci-biology/reaper/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/reapr/metadata.xml b/sci-biology/reapr/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/reapr/metadata.xml +++ b/sci-biology/reapr/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/repeatmasker-libraries/metadata.xml b/sci-biology/repeatmasker-libraries/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/repeatmasker-libraries/metadata.xml +++ b/sci-biology/repeatmasker-libraries/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/repeatmasker/metadata.xml b/sci-biology/repeatmasker/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/repeatmasker/metadata.xml +++ b/sci-biology/repeatmasker/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/reptile/metadata.xml b/sci-biology/reptile/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/reptile/metadata.xml +++ b/sci-biology/reptile/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/rmblast/metadata.xml b/sci-biology/rmblast/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/rmblast/metadata.xml +++ b/sci-biology/rmblast/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/rnaplex/metadata.xml b/sci-biology/rnaplex/metadata.xml index affa6b40c..8417d1580 100644 --- a/sci-biology/rnaplex/metadata.xml +++ b/sci-biology/rnaplex/metadata.xml @@ -5,4 +5,4 @@ <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> - </pkgmetadata> +</pkgmetadata> diff --git a/sci-biology/roche454ace2caf/metadata.xml b/sci-biology/roche454ace2caf/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/roche454ace2caf/metadata.xml +++ b/sci-biology/roche454ace2caf/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/ruffus/metadata.xml b/sci-biology/ruffus/metadata.xml index 5541360c7..1a91c19c5 100644 --- a/sci-biology/ruffus/metadata.xml +++ b/sci-biology/ruffus/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="pypi">ruffus</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="pypi">ruffus</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/rum/metadata.xml b/sci-biology/rum/metadata.xml index d2d1746d2..032147c48 100644 --- a/sci-biology/rum/metadata.xml +++ b/sci-biology/rum/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">itmat/rum</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">itmat/rum</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/sabre/metadata.xml b/sci-biology/sabre/metadata.xml index 4e02c2f05..7db111f9c 100644 --- a/sci-biology/sabre/metadata.xml +++ b/sci-biology/sabre/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">najoshi/sabre</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">najoshi/sabre</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/sailfish/metadata.xml b/sci-biology/sailfish/metadata.xml index 61d2e7a64..530333987 100644 --- a/sci-biology/sailfish/metadata.xml +++ b/sci-biology/sailfish/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <upstream> - <remote-id type="github">kingsfordgroup/sailfish</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <upstream> + <remote-id type="github">kingsfordgroup/sailfish</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/salmon/metadata.xml b/sci-biology/salmon/metadata.xml index 62715bec6..1907254d6 100644 --- a/sci-biology/salmon/metadata.xml +++ b/sci-biology/salmon/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <upstream> - <remote-id type="github">COMBINE-lab/salmon</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <upstream> + <remote-id type="github">COMBINE-lab/salmon</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/sambamba/metadata.xml b/sci-biology/sambamba/metadata.xml index ab03f4219..3c6df6245 100644 --- a/sci-biology/sambamba/metadata.xml +++ b/sci-biology/sambamba/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">lomereiter/sambamba</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">lomereiter/sambamba</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/samstat/metadata.xml b/sci-biology/samstat/metadata.xml index 516373ad8..5bed43cdc 100644 --- a/sci-biology/samstat/metadata.xml +++ b/sci-biology/samstat/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">samstat</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">samstat</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/scaffold_builder/metadata.xml b/sci-biology/scaffold_builder/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/scaffold_builder/metadata.xml +++ b/sci-biology/scaffold_builder/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/scan_for_matches/metadata.xml b/sci-biology/scan_for_matches/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/scan_for_matches/metadata.xml +++ b/sci-biology/scan_for_matches/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/scbi_blast/metadata.xml b/sci-biology/scbi_blast/metadata.xml index 9eed61d49..4e1fea2dd 100644 --- a/sci-biology/scbi_blast/metadata.xml +++ b/sci-biology/scbi_blast/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="rubygems">scbi_blast</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="rubygems">scbi_blast</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/scbi_fasta/metadata.xml b/sci-biology/scbi_fasta/metadata.xml index 36ecf15ef..bedbad038 100644 --- a/sci-biology/scbi_fasta/metadata.xml +++ b/sci-biology/scbi_fasta/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="rubygems">scbi_fasta</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="rubygems">scbi_fasta</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/scbi_fastq/metadata.xml b/sci-biology/scbi_fastq/metadata.xml index 69f445f42..6468736c1 100644 --- a/sci-biology/scbi_fastq/metadata.xml +++ b/sci-biology/scbi_fastq/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="rubygems">scbi_fastq</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="rubygems">scbi_fastq</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/scbi_mapreduce/metadata.xml b/sci-biology/scbi_mapreduce/metadata.xml index c9e61f5f3..fec60e6f5 100644 --- a/sci-biology/scbi_mapreduce/metadata.xml +++ b/sci-biology/scbi_mapreduce/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="rubygems">scbi_mapreduce</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="rubygems">scbi_mapreduce</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/scbi_plot/metadata.xml b/sci-biology/scbi_plot/metadata.xml index 4c8659f89..f94206d02 100644 --- a/sci-biology/scbi_plot/metadata.xml +++ b/sci-biology/scbi_plot/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="rubygems">scbi_plot</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="rubygems">scbi_plot</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/scbi_zcat/metadata.xml b/sci-biology/scbi_zcat/metadata.xml index a55e8612a..aaf119d8f 100644 --- a/sci-biology/scbi_zcat/metadata.xml +++ b/sci-biology/scbi_zcat/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="rubygems">scbi_zcat</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="rubygems">scbi_zcat</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/sclust/metadata.xml b/sci-biology/sclust/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/sclust/metadata.xml +++ b/sci-biology/sclust/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/screed/metadata.xml b/sci-biology/screed/metadata.xml index 21ae0b4b6..297401f3d 100644 --- a/sci-biology/screed/metadata.xml +++ b/sci-biology/screed/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">ged-lab/screed</remote-id> - <remote-id type="pypi">screed</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">ged-lab/screed</remote-id> + <remote-id type="pypi">screed</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/scythe/metadata.xml b/sci-biology/scythe/metadata.xml index 4bcbeeb31..562de8b91 100644 --- a/sci-biology/scythe/metadata.xml +++ b/sci-biology/scythe/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">vsbuffalo/scythe</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">vsbuffalo/scythe</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/seqclean/metadata.xml b/sci-biology/seqclean/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/seqclean/metadata.xml +++ b/sci-biology/seqclean/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/seqtools/metadata.xml b/sci-biology/seqtools/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/seqtools/metadata.xml +++ b/sci-biology/seqtools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/sequin/metadata.xml b/sci-biology/sequin/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/sequin/metadata.xml +++ b/sci-biology/sequin/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/sff_dump/metadata.xml b/sci-biology/sff_dump/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/sff_dump/metadata.xml +++ b/sci-biology/sff_dump/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/sga/metadata.xml b/sci-biology/sga/metadata.xml index 028b21c5d..51beb3925 100644 --- a/sci-biology/sga/metadata.xml +++ b/sci-biology/sga/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <use> - <flag name="jemalloc">Use <pkg>dev-libs/jemalloc</pkg></flag> - </use> - <upstream> - <remote-id type="github">jts/sga</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <use> + <flag name="jemalloc">Use <pkg>dev-libs/jemalloc</pkg></flag> + </use> + <upstream> + <remote-id type="github">jts/sga</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/sgp2/metadata.xml b/sci-biology/sgp2/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/sgp2/metadata.xml +++ b/sci-biology/sgp2/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/sickle/metadata.xml b/sci-biology/sickle/metadata.xml index 5607edcbd..efe28c5c6 100644 --- a/sci-biology/sickle/metadata.xml +++ b/sci-biology/sickle/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">najoshi/sickle</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">najoshi/sickle</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/signalp/metadata.xml b/sci-biology/signalp/metadata.xml index affa6b40c..8417d1580 100644 --- a/sci-biology/signalp/metadata.xml +++ b/sci-biology/signalp/metadata.xml @@ -5,4 +5,4 @@ <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> - </pkgmetadata> +</pkgmetadata> diff --git a/sci-biology/skewer-bin/metadata.xml b/sci-biology/skewer-bin/metadata.xml index 4c94908e8..f463f10c4 100644 --- a/sci-biology/skewer-bin/metadata.xml +++ b/sci-biology/skewer-bin/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">skewer</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">skewer</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/smalt-bin/metadata.xml b/sci-biology/smalt-bin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/smalt-bin/metadata.xml +++ b/sci-biology/smalt-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/smalt/metadata.xml b/sci-biology/smalt/metadata.xml index 4b2ca765e..4a88f7b90 100644 --- a/sci-biology/smalt/metadata.xml +++ b/sci-biology/smalt/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">smalt</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">smalt</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/snap/metadata.xml b/sci-biology/snap/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/snap/metadata.xml +++ b/sci-biology/snap/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/snphylo/metadata.xml b/sci-biology/snphylo/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/snphylo/metadata.xml +++ b/sci-biology/snphylo/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/snpomatic/metadata.xml b/sci-biology/snpomatic/metadata.xml index 47ff2f6ab..477548a39 100644 --- a/sci-biology/snpomatic/metadata.xml +++ b/sci-biology/snpomatic/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">magnusmanske/snpomatic</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">magnusmanske/snpomatic</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/somatic-sniper/metadata.xml b/sci-biology/somatic-sniper/metadata.xml index d931eaf33..ff905cc3e 100644 --- a/sci-biology/somatic-sniper/metadata.xml +++ b/sci-biology/somatic-sniper/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">genome/somatic-sniper</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">genome/somatic-sniper</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/spm/metadata.xml b/sci-biology/spm/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-biology/spm/metadata.xml +++ b/sci-biology/spm/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/sra_sdk/metadata.xml b/sci-biology/sra_sdk/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/sra_sdk/metadata.xml +++ b/sci-biology/sra_sdk/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ssaha2-bin/metadata.xml b/sci-biology/ssaha2-bin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/ssaha2-bin/metadata.xml +++ b/sci-biology/ssaha2-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/stacks/metadata.xml b/sci-biology/stacks/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/stacks/metadata.xml +++ b/sci-biology/stacks/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/staden/metadata.xml b/sci-biology/staden/metadata.xml index 73d16b005..1ed1820a4 100644 --- a/sci-biology/staden/metadata.xml +++ b/sci-biology/staden/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">staden</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">staden</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/staden_doc/metadata.xml b/sci-biology/staden_doc/metadata.xml index 73d16b005..1ed1820a4 100644 --- a/sci-biology/staden_doc/metadata.xml +++ b/sci-biology/staden_doc/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">staden</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">staden</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/stampy-bin/metadata.xml b/sci-biology/stampy-bin/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/stampy-bin/metadata.xml +++ b/sci-biology/stampy-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/stringtie/metadata.xml b/sci-biology/stringtie/metadata.xml index b909ea058..c86470531 100644 --- a/sci-biology/stringtie/metadata.xml +++ b/sci-biology/stringtie/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">gpertea/stringtie</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">gpertea/stringtie</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/subread/metadata.xml b/sci-biology/subread/metadata.xml index dc7a68adc..7ebe03b69 100644 --- a/sci-biology/subread/metadata.xml +++ b/sci-biology/subread/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">subread</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">subread</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/swissknife/metadata.xml b/sci-biology/swissknife/metadata.xml index cc4d8f93e..ac0f8faa4 100644 --- a/sci-biology/swissknife/metadata.xml +++ b/sci-biology/swissknife/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">swissknife</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">swissknife</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/symap/metadata.xml b/sci-biology/symap/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-biology/symap/metadata.xml +++ b/sci-biology/symap/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/tablet-bin/metadata.xml b/sci-biology/tablet-bin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/tablet-bin/metadata.xml +++ b/sci-biology/tablet-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/tablet/metadata.xml b/sci-biology/tablet/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/tablet/metadata.xml +++ b/sci-biology/tablet/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/tagdust/metadata.xml b/sci-biology/tagdust/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/tagdust/metadata.xml +++ b/sci-biology/tagdust/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/tclust/metadata.xml b/sci-biology/tclust/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/tclust/metadata.xml +++ b/sci-biology/tclust/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/tigr-foundation-libs/metadata.xml b/sci-biology/tigr-foundation-libs/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/tigr-foundation-libs/metadata.xml +++ b/sci-biology/tigr-foundation-libs/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/trans-abyss/metadata.xml b/sci-biology/trans-abyss/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/trans-abyss/metadata.xml +++ b/sci-biology/trans-abyss/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/trf-bin/metadata.xml b/sci-biology/trf-bin/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/trf-bin/metadata.xml +++ b/sci-biology/trf-bin/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/trf/metadata.xml b/sci-biology/trf/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/trf/metadata.xml +++ b/sci-biology/trf/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/trim_galore/metadata.xml b/sci-biology/trim_galore/metadata.xml index 1d67411d5..138cb7705 100644 --- a/sci-biology/trim_galore/metadata.xml +++ b/sci-biology/trim_galore/metadata.xml @@ -5,7 +5,7 @@ <email>mmokrejs@fold.natur.cuni.cz</email> <name>Martin Mokrejs</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-biology@gentoo.org</email> <name>Gentoo Biology Project</name> </maintainer> diff --git a/sci-biology/trimmomatic/metadata.xml b/sci-biology/trimmomatic/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/trimmomatic/metadata.xml +++ b/sci-biology/trimmomatic/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/trinityrnaseq/metadata.xml b/sci-biology/trinityrnaseq/metadata.xml index bc150ff20..aa9006922 100644 --- a/sci-biology/trinityrnaseq/metadata.xml +++ b/sci-biology/trinityrnaseq/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">trinityrnaseq/trinityrnaseq</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">trinityrnaseq/trinityrnaseq</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/trowel/metadata.xml b/sci-biology/trowel/metadata.xml index d0f646374..0f267b755 100644 --- a/sci-biology/trowel/metadata.xml +++ b/sci-biology/trowel/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">downloads</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">downloads</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/twinscan/metadata.xml b/sci-biology/twinscan/metadata.xml index 004c99555..8417d1580 100644 --- a/sci-biology/twinscan/metadata.xml +++ b/sci-biology/twinscan/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - </pkgmetadata> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/ugene/metadata.xml b/sci-biology/ugene/metadata.xml index 19f7276ea..a3daeebd2 100644 --- a/sci-biology/ugene/metadata.xml +++ b/sci-biology/ugene/metadata.xml @@ -5,7 +5,7 @@ <email>alexxy@gentoo.org</email> <name>Alexey Shvetsov</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci@gentoo.org</email> <name>Gentoo Science Project</name> </maintainer> diff --git a/sci-biology/vague-bin/metadata.xml b/sci-biology/vague-bin/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/vague-bin/metadata.xml +++ b/sci-biology/vague-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/vcflib/metadata.xml b/sci-biology/vcflib/metadata.xml index ce295b942..b2c9e479f 100644 --- a/sci-biology/vcflib/metadata.xml +++ b/sci-biology/vcflib/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">vcflib/vcflib</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">vcflib/vcflib</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/vcftools/metadata.xml b/sci-biology/vcftools/metadata.xml index f2a7d8dc6..0253c16be 100644 --- a/sci-biology/vcftools/metadata.xml +++ b/sci-biology/vcftools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">vcftools/vcftools</remote-id> - <remote-id type="sourceforge">vcftools</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">vcftools/vcftools</remote-id> + <remote-id type="sourceforge">vcftools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/velvetk/metadata.xml b/sci-biology/velvetk/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/velvetk/metadata.xml +++ b/sci-biology/velvetk/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/verifyBamID/metadata.xml b/sci-biology/verifyBamID/metadata.xml index 41b69bc9c..eafa6ae71 100644 --- a/sci-biology/verifyBamID/metadata.xml +++ b/sci-biology/verifyBamID/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">statgen/libStatGen</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">statgen/libStatGen</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/vt/metadata.xml b/sci-biology/vt/metadata.xml index ab18754bf..adc39d8cb 100644 --- a/sci-biology/vt/metadata.xml +++ b/sci-biology/vt/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">atks/vt</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">atks/vt</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/wcd/metadata.xml b/sci-biology/wcd/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/wcd/metadata.xml +++ b/sci-biology/wcd/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/weblogo/metadata.xml b/sci-biology/weblogo/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/weblogo/metadata.xml +++ b/sci-biology/weblogo/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/wgs-assembler/metadata.xml b/sci-biology/wgs-assembler/metadata.xml index 5564097a7..530c31d3e 100644 --- a/sci-biology/wgs-assembler/metadata.xml +++ b/sci-biology/wgs-assembler/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">wgs-assembler</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">wgs-assembler</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/wgs_tools/metadata.xml b/sci-biology/wgs_tools/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-biology/wgs_tools/metadata.xml +++ b/sci-biology/wgs_tools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/wise/metadata.xml b/sci-biology/wise/metadata.xml index 959160fe4..8417d1580 100644 --- a/sci-biology/wise/metadata.xml +++ b/sci-biology/wise/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/yaha/metadata.xml b/sci-biology/yaha/metadata.xml index 4d610cc7e..641b80694 100644 --- a/sci-biology/yaha/metadata.xml +++ b/sci-biology/yaha/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">GregoryFaust/yaha</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">GregoryFaust/yaha</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-biology/zmsort/metadata.xml b/sci-biology/zmsort/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-biology/zmsort/metadata.xml +++ b/sci-biology/zmsort/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/GromacsWrapper/metadata.xml b/sci-chemistry/GromacsWrapper/metadata.xml index f5a6c6b65..7daa2ce7e 100644 --- a/sci-chemistry/GromacsWrapper/metadata.xml +++ b/sci-chemistry/GromacsWrapper/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/NMRdyn/metadata.xml b/sci-chemistry/NMRdyn/metadata.xml index b7684473f..5670afe1a 100644 --- a/sci-chemistry/NMRdyn/metadata.xml +++ b/sci-chemistry/NMRdyn/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-chemistry/ambertools/metadata.xml b/sci-chemistry/ambertools/metadata.xml index d10bde235..7daa2ce7e 100644 --- a/sci-chemistry/ambertools/metadata.xml +++ b/sci-chemistry/ambertools/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/ball/metadata.xml b/sci-chemistry/ball/metadata.xml index 9bf12a89f..c2980f0b6 100644 --- a/sci-chemistry/ball/metadata.xml +++ b/sci-chemistry/ball/metadata.xml @@ -1,14 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> Rapid Software Prototyping can significantly reduce development times in the field of Computational Molecular Biology and Molecular Modeling. BALL (Biochemical Algorithms Library) is an application framework in C++ that @@ -27,9 +27,9 @@ Based on BALL we have developed a stand-alone tool for molecular visualization, BALLView . BALLView makes the broad functionality available through an integrated user-friendly GUI. </longdescription> - <use> - <flag name="sql">Include SQL database support</flag> - <flag name="cuda">Include cuda support</flag> - <flag name="webkit">Uses <pkg>dev-qt/qt-webkit</pkg> for drawing</flag> - </use> + <use> + <flag name="sql">Include SQL database support</flag> + <flag name="cuda">Include cuda support</flag> + <flag name="webkit">Uses <pkg>dev-qt/qt-webkit</pkg> for drawing</flag> + </use> </pkgmetadata> diff --git a/sci-chemistry/burrow-owl/metadata.xml b/sci-chemistry/burrow-owl/metadata.xml index b6097c0e2..d78ba4b82 100644 --- a/sci-chemistry/burrow-owl/metadata.xml +++ b/sci-chemistry/burrow-owl/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">burrow-owl</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">burrow-owl</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/camshift/metadata.xml b/sci-chemistry/camshift/metadata.xml index 4ac68c154..da36ecbfc 100644 --- a/sci-chemistry/camshift/metadata.xml +++ b/sci-chemistry/camshift/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> -</maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/chimera-bin/metadata.xml b/sci-chemistry/chimera-bin/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/chimera-bin/metadata.xml +++ b/sci-chemistry/chimera-bin/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/chooch/metadata.xml b/sci-chemistry/chooch/metadata.xml index 4ac68c154..da36ecbfc 100644 --- a/sci-chemistry/chooch/metadata.xml +++ b/sci-chemistry/chooch/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> -</maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/cnsface/metadata.xml b/sci-chemistry/cnsface/metadata.xml index 8b64e0473..4e146a4b1 100644 --- a/sci-chemistry/cnsface/metadata.xml +++ b/sci-chemistry/cnsface/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">cnsface</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">cnsface</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/concoord/metadata.xml b/sci-chemistry/concoord/metadata.xml index bce834c0c..713d21566 100644 --- a/sci-chemistry/concoord/metadata.xml +++ b/sci-chemistry/concoord/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - </maintainer> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/coot/metadata.xml b/sci-chemistry/coot/metadata.xml index e0c97ae91..79d42af98 100644 --- a/sci-chemistry/coot/metadata.xml +++ b/sci-chemistry/coot/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - <name>Justin Lecher</name> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + <name>Justin Lecher</name> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/cpmgfit/metadata.xml b/sci-chemistry/cpmgfit/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/cpmgfit/metadata.xml +++ b/sci-chemistry/cpmgfit/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/cs-rosetta/metadata.xml b/sci-chemistry/cs-rosetta/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/cs-rosetta/metadata.xml +++ b/sci-chemistry/cs-rosetta/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/curvefit/metadata.xml b/sci-chemistry/curvefit/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/curvefit/metadata.xml +++ b/sci-chemistry/curvefit/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/dl_poly/metadata.xml b/sci-chemistry/dl_poly/metadata.xml index 6f0f3dc0a..1f2dd3ef9 100644 --- a/sci-chemistry/dl_poly/metadata.xml +++ b/sci-chemistry/dl_poly/metadata.xml @@ -5,7 +5,7 @@ <email>ottxor@gentoo.org</email> <name>Christoph Junghans</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-chemistry@gentoo.org</email> <name>Gentoo Chemistry Project</name> </maintainer> diff --git a/sci-chemistry/drawxtl/metadata.xml b/sci-chemistry/drawxtl/metadata.xml index 9fb449ffc..fe7f76183 100644 --- a/sci-chemistry/drawxtl/metadata.xml +++ b/sci-chemistry/drawxtl/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription lang="en"> This software can be used to produce crystal structure drawings from structural data. </longdescription> diff --git a/sci-chemistry/dssp2pdb/metadata.xml b/sci-chemistry/dssp2pdb/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/dssp2pdb/metadata.xml +++ b/sci-chemistry/dssp2pdb/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/erkale/metadata.xml b/sci-chemistry/erkale/metadata.xml index 4e7eadb4e..8c2fec457 100644 --- a/sci-chemistry/erkale/metadata.xml +++ b/sci-chemistry/erkale/metadata.xml @@ -1,14 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>rei4dan@gmail.com</email> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>rei4dan@gmail.com</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription lang="en"> ERKALE is a quantum chemistry program used to solve the electronic structure of atoms, molecules and molecular clusters. It was developed at the University of Helsinki, and is currently developed at Aalto University. diff --git a/sci-chemistry/freeon/metadata.xml b/sci-chemistry/freeon/metadata.xml index 581c9876a..8f4e98e7e 100644 --- a/sci-chemistry/freeon/metadata.xml +++ b/sci-chemistry/freeon/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription lang="en"> + <longdescription lang="en"> FreeON is an experimental, open source (GPL) suite of programs for linear scaling quantum chemistry. </longdescription> - <maintainer type="person"> - <email>nicolasbock@gentoo.org</email> - <name>Nicolas Bock</name> - </maintainer> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>nicolasbock@gentoo.org</email> + <name>Nicolas Bock</name> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/gamess/metadata.xml b/sci-chemistry/gamess/metadata.xml index f255ea092..f52930757 100644 --- a/sci-chemistry/gamess/metadata.xml +++ b/sci-chemistry/gamess/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <use> - <flag name="neo">Enable NEO for nuclear basis support</flag> - <flag name="pax_kernel">Make this package work on PAX kernels</flag> - <flag name="qmmm-tinker">Enable tinker qmmm code</flag> - </use> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <use> + <flag name="neo">Enable NEO for nuclear basis support</flag> + <flag name="pax_kernel">Make this package work on PAX kernels</flag> + <flag name="qmmm-tinker">Enable tinker qmmm code</flag> + </use> </pkgmetadata> diff --git a/sci-chemistry/gnome-chemistry-utils/metadata.xml b/sci-chemistry/gnome-chemistry-utils/metadata.xml index 94e01b4a7..5a8da44f4 100644 --- a/sci-chemistry/gnome-chemistry-utils/metadata.xml +++ b/sci-chemistry/gnome-chemistry-utils/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription lang="en"> + <longdescription lang="en"> The Gnome Chemistry Utils provide some programs and library containing GTK widgets and some C++ classes related to chemistry. </longdescription> - <use> - <flag name="gnumeric">Build pluging for gnumeric</flag> - </use> + <use> + <flag name="gnumeric">Build pluging for gnumeric</flag> + </use> </pkgmetadata> diff --git a/sci-chemistry/hydronmr/metadata.xml b/sci-chemistry/hydronmr/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/hydronmr/metadata.xml +++ b/sci-chemistry/hydronmr/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mage/metadata.xml b/sci-chemistry/mage/metadata.xml index 4ac68c154..da36ecbfc 100644 --- a/sci-chemistry/mage/metadata.xml +++ b/sci-chemistry/mage/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> -</maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mddnmr/metadata.xml b/sci-chemistry/mddnmr/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mddnmr/metadata.xml +++ b/sci-chemistry/mddnmr/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mdsctk/metadata.xml b/sci-chemistry/mdsctk/metadata.xml index 88176dc96..466c91299 100644 --- a/sci-chemistry/mdsctk/metadata.xml +++ b/sci-chemistry/mdsctk/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>ottxor@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <use> - <flag name="R">Install <pkg>dev-lang/R</pkg> scripts as well</flag> - </use> - <upstream> - <remote-id type="github">douradopalmares/mdsctk</remote-id> - </upstream> + <maintainer type="person"> + <email>ottxor@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <use> + <flag name="R">Install <pkg>dev-lang/R</pkg> scripts as well</flag> + </use> + <upstream> + <remote-id type="github">douradopalmares/mdsctk</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/mgltools-autodocktools/metadata.xml b/sci-chemistry/mgltools-autodocktools/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-autodocktools/metadata.xml +++ b/sci-chemistry/mgltools-autodocktools/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-bhtree/metadata.xml b/sci-chemistry/mgltools-bhtree/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-bhtree/metadata.xml +++ b/sci-chemistry/mgltools-bhtree/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-cadd/metadata.xml b/sci-chemistry/mgltools-cadd/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-cadd/metadata.xml +++ b/sci-chemistry/mgltools-cadd/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-cmolkit/metadata.xml b/sci-chemistry/mgltools-cmolkit/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-cmolkit/metadata.xml +++ b/sci-chemistry/mgltools-cmolkit/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-dejavu/metadata.xml b/sci-chemistry/mgltools-dejavu/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-dejavu/metadata.xml +++ b/sci-chemistry/mgltools-dejavu/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-geomutils/metadata.xml b/sci-chemistry/mgltools-geomutils/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-geomutils/metadata.xml +++ b/sci-chemistry/mgltools-geomutils/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-gle/metadata.xml b/sci-chemistry/mgltools-gle/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-gle/metadata.xml +++ b/sci-chemistry/mgltools-gle/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-mglutil/metadata.xml b/sci-chemistry/mgltools-mglutil/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-mglutil/metadata.xml +++ b/sci-chemistry/mgltools-mglutil/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-molkit/metadata.xml b/sci-chemistry/mgltools-molkit/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-molkit/metadata.xml +++ b/sci-chemistry/mgltools-molkit/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-networkeditor/metadata.xml b/sci-chemistry/mgltools-networkeditor/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-networkeditor/metadata.xml +++ b/sci-chemistry/mgltools-networkeditor/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-opengltk/metadata.xml b/sci-chemistry/mgltools-opengltk/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-opengltk/metadata.xml +++ b/sci-chemistry/mgltools-opengltk/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-pmv/metadata.xml b/sci-chemistry/mgltools-pmv/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-pmv/metadata.xml +++ b/sci-chemistry/mgltools-pmv/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-pyautodock/metadata.xml b/sci-chemistry/mgltools-pyautodock/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-pyautodock/metadata.xml +++ b/sci-chemistry/mgltools-pyautodock/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-pybabel/metadata.xml b/sci-chemistry/mgltools-pybabel/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-pybabel/metadata.xml +++ b/sci-chemistry/mgltools-pybabel/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-pyglf/metadata.xml b/sci-chemistry/mgltools-pyglf/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-pyglf/metadata.xml +++ b/sci-chemistry/mgltools-pyglf/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-qslimlib/metadata.xml b/sci-chemistry/mgltools-qslimlib/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-qslimlib/metadata.xml +++ b/sci-chemistry/mgltools-qslimlib/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-scenario2/metadata.xml b/sci-chemistry/mgltools-scenario2/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-scenario2/metadata.xml +++ b/sci-chemistry/mgltools-scenario2/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-sff/metadata.xml b/sci-chemistry/mgltools-sff/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-sff/metadata.xml +++ b/sci-chemistry/mgltools-sff/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-support/metadata.xml b/sci-chemistry/mgltools-support/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-support/metadata.xml +++ b/sci-chemistry/mgltools-support/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-symserv/metadata.xml b/sci-chemistry/mgltools-symserv/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-symserv/metadata.xml +++ b/sci-chemistry/mgltools-symserv/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-utpackages/metadata.xml b/sci-chemistry/mgltools-utpackages/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-utpackages/metadata.xml +++ b/sci-chemistry/mgltools-utpackages/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-viewer-framework/metadata.xml b/sci-chemistry/mgltools-viewer-framework/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-viewer-framework/metadata.xml +++ b/sci-chemistry/mgltools-viewer-framework/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-vision/metadata.xml b/sci-chemistry/mgltools-vision/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-vision/metadata.xml +++ b/sci-chemistry/mgltools-vision/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-visionlib/metadata.xml b/sci-chemistry/mgltools-visionlib/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-visionlib/metadata.xml +++ b/sci-chemistry/mgltools-visionlib/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-volume/metadata.xml b/sci-chemistry/mgltools-volume/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-volume/metadata.xml +++ b/sci-chemistry/mgltools-volume/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools-webservices/metadata.xml b/sci-chemistry/mgltools-webservices/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools-webservices/metadata.xml +++ b/sci-chemistry/mgltools-webservices/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mgltools/metadata.xml b/sci-chemistry/mgltools/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mgltools/metadata.xml +++ b/sci-chemistry/mgltools/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mics/metadata.xml b/sci-chemistry/mics/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mics/metadata.xml +++ b/sci-chemistry/mics/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/modelfree/metadata.xml b/sci-chemistry/modelfree/metadata.xml index bce834c0c..713d21566 100644 --- a/sci-chemistry/modelfree/metadata.xml +++ b/sci-chemistry/modelfree/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - </maintainer> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/modeller/metadata.xml b/sci-chemistry/modeller/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/modeller/metadata.xml +++ b/sci-chemistry/modeller/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/module2/metadata.xml b/sci-chemistry/module2/metadata.xml index bce834c0c..713d21566 100644 --- a/sci-chemistry/module2/metadata.xml +++ b/sci-chemistry/module2/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - </maintainer> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mtz2hkl/metadata.xml b/sci-chemistry/mtz2hkl/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mtz2hkl/metadata.xml +++ b/sci-chemistry/mtz2hkl/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/mtz2sca/metadata.xml b/sci-chemistry/mtz2sca/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/mtz2sca/metadata.xml +++ b/sci-chemistry/mtz2sca/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/nMOLDYN/metadata.xml b/sci-chemistry/nMOLDYN/metadata.xml index c2dc1568a..7daa2ce7e 100644 --- a/sci-chemistry/nMOLDYN/metadata.xml +++ b/sci-chemistry/nMOLDYN/metadata.xml @@ -5,7 +5,7 @@ <email>alexxy@gentoo.org</email> <name>Alexey Shvetsov</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-chemistry@gentoo.org</email> <name>Gentoo Chemistry Project</name> </maintainer> diff --git a/sci-chemistry/nmrpipe/metadata.xml b/sci-chemistry/nmrpipe/metadata.xml index e0c97ae91..79d42af98 100644 --- a/sci-chemistry/nmrpipe/metadata.xml +++ b/sci-chemistry/nmrpipe/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - <name>Justin Lecher</name> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + <name>Justin Lecher</name> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/nmrview/metadata.xml b/sci-chemistry/nmrview/metadata.xml index f3af35416..79d42af98 100644 --- a/sci-chemistry/nmrview/metadata.xml +++ b/sci-chemistry/nmrview/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - <name>Justin Lecher</name> - </maintainer> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + <name>Justin Lecher</name> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/nwchem/metadata.xml b/sci-chemistry/nwchem/metadata.xml index 977067693..5d5f4cd5e 100644 --- a/sci-chemistry/nwchem/metadata.xml +++ b/sci-chemistry/nwchem/metadata.xml @@ -1,34 +1,34 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <use> - <flag name="blas"> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <use> + <flag name="blas"> Use external BLAS library instead of the internal routines </flag> - <flag name="cuda"> + <flag name="cuda"> Enable CUDA GPU support for the Tensor Contraction Engine generated methods (CI, MBPT, CC) </flag> - <flag name="int64"> + <flag name="int64"> Use 64 bits integers </flag> - <flag name="lapack"> + <flag name="lapack"> Use external LAPACK library instead of the internal routines </flag> - <flag name="mrcc"> + <flag name="mrcc"> Compile the routines for Multi Reference Coupled Clusters theory </flag> - <flag name="nwchem-tests">Install qa tests data</flag> - <flag name="scalapack"> + <flag name="nwchem-tests">Install qa tests data</flag> + <flag name="scalapack"> Use external SCALAPACK library </flag> - </use> + </use> </pkgmetadata> diff --git a/sci-chemistry/openbabel-java/metadata.xml b/sci-chemistry/openbabel-java/metadata.xml index 7b3bd73b6..4298a22b6 100644 --- a/sci-chemistry/openbabel-java/metadata.xml +++ b/sci-chemistry/openbabel-java/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. This package enables to access Open Babel library from Java (Scala, etc.) programs. </longdescription> - <upstream> - <remote-id type="sourceforge">openbabel</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">openbabel</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/openbabel-perl/metadata.xml b/sci-chemistry/openbabel-perl/metadata.xml index 2c0c6f576..a33d79672 100644 --- a/sci-chemistry/openbabel-perl/metadata.xml +++ b/sci-chemistry/openbabel-perl/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. This package enables to access Open Babel library from Perl programs. </longdescription> - <upstream> - <remote-id type="sourceforge">openbabel</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">openbabel</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/openbabel-python/metadata.xml b/sci-chemistry/openbabel-python/metadata.xml index 55af72716..c7b4a91d5 100644 --- a/sci-chemistry/openbabel-python/metadata.xml +++ b/sci-chemistry/openbabel-python/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. This package enables to access Open Babel library from Python programs. </longdescription> - <upstream> - <remote-id type="sourceforge">openbabel</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">openbabel</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/openbabel-ruby/metadata.xml b/sci-chemistry/openbabel-ruby/metadata.xml index 5912568a0..3a3af58ab 100644 --- a/sci-chemistry/openbabel-ruby/metadata.xml +++ b/sci-chemistry/openbabel-ruby/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. This package enables to access Open Babel library from Ruby programs. </longdescription> - <upstream> - <remote-id type="sourceforge">openbabel</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">openbabel</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/openbabel/metadata.xml b/sci-chemistry/openbabel/metadata.xml index a76a86e66..3566de64c 100644 --- a/sci-chemistry/openbabel/metadata.xml +++ b/sci-chemistry/openbabel/metadata.xml @@ -1,26 +1,26 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. </longdescription> - <use> - <flag name="doc">Install API dicumentation.</flag> - <flag name="openmp">Enable parallelization using OpenMP.</flag> - <flag name="java">Install Java bindings.</flag> - <flag name="perl">Install Perl bindings.</flag> - <flag name="python">Install Python bindings and PyBel.</flag> - <flag name="ruby">Install Ruby bindings.</flag> - <flag name="wxwidgets">Build Open Babel GUI.</flag> - </use> - <upstream> - <remote-id type="sourceforge">openbabel</remote-id> - </upstream> + <use> + <flag name="doc">Install API dicumentation.</flag> + <flag name="openmp">Enable parallelization using OpenMP.</flag> + <flag name="java">Install Java bindings.</flag> + <flag name="perl">Install Perl bindings.</flag> + <flag name="python">Install Python bindings and PyBel.</flag> + <flag name="ruby">Install Ruby bindings.</flag> + <flag name="wxwidgets">Build Open Babel GUI.</flag> + </use> + <upstream> + <remote-id type="sourceforge">openbabel</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/pales-bin/metadata.xml b/sci-chemistry/pales-bin/metadata.xml index bce834c0c..713d21566 100644 --- a/sci-chemistry/pales-bin/metadata.xml +++ b/sci-chemistry/pales-bin/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - </maintainer> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/panav/metadata.xml b/sci-chemistry/panav/metadata.xml index b5d9f111e..694fe0a9f 100644 --- a/sci-chemistry/panav/metadata.xml +++ b/sci-chemistry/panav/metadata.xml @@ -1,14 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> It has been estimated that more than 20% of the proteins in the BMRB are improperly referenced and that about 1% of all chemical shift assignments are mis-assigned. These statistics also reflect the likelihood that any newly diff --git a/sci-chemistry/pesto/metadata.xml b/sci-chemistry/pesto/metadata.xml index 7db888e43..58a4e2600 100644 --- a/sci-chemistry/pesto/metadata.xml +++ b/sci-chemistry/pesto/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">pesto</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">pesto</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/phenix-bin/metadata.xml b/sci-chemistry/phenix-bin/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/phenix-bin/metadata.xml +++ b/sci-chemistry/phenix-bin/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/polygon/metadata.xml b/sci-chemistry/polygon/metadata.xml index 4ac68c154..da36ecbfc 100644 --- a/sci-chemistry/polygon/metadata.xml +++ b/sci-chemistry/polygon/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> -</maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/pymol-plugins-ezviz/metadata.xml b/sci-chemistry/pymol-plugins-ezviz/metadata.xml index e8b07ec91..0dff1c081 100644 --- a/sci-chemistry/pymol-plugins-ezviz/metadata.xml +++ b/sci-chemistry/pymol-plugins-ezviz/metadata.xml @@ -1,14 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> EZ-Viz was developed as an assistance tool for the difficult to understand user interface of PyMOL. The standard interface is very complex takes a long time to learn, especially for students diff --git a/sci-chemistry/pymol-plugins-psico/metadata.xml b/sci-chemistry/pymol-plugins-psico/metadata.xml index 6f3c380f3..9d384241e 100644 --- a/sci-chemistry/pymol-plugins-psico/metadata.xml +++ b/sci-chemistry/pymol-plugins-psico/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <upstream> - <remote-id type="github">speleo3/pymol-psico</remote-id> - </upstream> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <upstream> + <remote-id type="github">speleo3/pymol-psico</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/pymol/metadata.xml b/sci-chemistry/pymol/metadata.xml index f1194d1b2..d36c262f4 100644 --- a/sci-chemistry/pymol/metadata.xml +++ b/sci-chemistry/pymol/metadata.xml @@ -1,14 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <use> - <flag name="web">Install Pymodule needed for web app support</flag> - </use> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <use> + <flag name="web">Install Pymodule needed for web app support</flag> + </use> </pkgmetadata> diff --git a/sci-chemistry/pyquante/metadata.xml b/sci-chemistry/pyquante/metadata.xml index 191423d34..9f3ad9572 100644 --- a/sci-chemistry/pyquante/metadata.xml +++ b/sci-chemistry/pyquante/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">pyquante</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">pyquante</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/rosetta-tools/metadata.xml b/sci-chemistry/rosetta-tools/metadata.xml index 3d6594808..a5629e344 100644 --- a/sci-chemistry/rosetta-tools/metadata.xml +++ b/sci-chemistry/rosetta-tools/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">dylans-biotools</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">dylans-biotools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/rosetta/metadata.xml b/sci-chemistry/rosetta/metadata.xml index bbd65307d..dcf5c02f4 100644 --- a/sci-chemistry/rosetta/metadata.xml +++ b/sci-chemistry/rosetta/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <use> - <flag name="boinc">compile rosetta as a rosetta@home client</flag> - <flag name="boost">compile rosetta with boost supported code</flag> - <flag name="float">Build with floats rather than doubles</flag> - <flag name="lange">Apply patches from www.csrosetta.org</flag> - </use> - <upstream> - <bugs-to>mailto:general-support@mail.rosettacommons.org</bugs-to> - </upstream> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <use> + <flag name="boinc">compile rosetta as a rosetta@home client</flag> + <flag name="boost">compile rosetta with boost supported code</flag> + <flag name="float">Build with floats rather than doubles</flag> + <flag name="lange">Apply patches from www.csrosetta.org</flag> + </use> + <upstream> + <bugs-to>mailto:general-support@mail.rosettacommons.org</bugs-to> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/shiftx/metadata.xml b/sci-chemistry/shiftx/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/shiftx/metadata.xml +++ b/sci-chemistry/shiftx/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/shiftx2/metadata.xml b/sci-chemistry/shiftx2/metadata.xml index 0af8b973c..6fee17f87 100644 --- a/sci-chemistry/shiftx2/metadata.xml +++ b/sci-chemistry/shiftx2/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> SHIFTX2 predicts both the backbone and side chain 1H, 13C and 15N chemical shifts for proteins using their structural (PDB) coordinates as input. SHIFTX2 combines ensemble machine learning methods with sequence @@ -36,7 +36,7 @@ prediction. Journal of Biomolecular NMR, Volume 50, Number 1, 43-57. doi: 10.1007/s10858-011-9478-4. </longdescription> - <use> - <flag name="debug">Enables debug output in the shiftx2 java part</flag> - </use> + <use> + <flag name="debug">Enables debug output in the shiftx2 java part</flag> + </use> </pkgmetadata> diff --git a/sci-chemistry/smmp/metadata.xml b/sci-chemistry/smmp/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/smmp/metadata.xml +++ b/sci-chemistry/smmp/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/ssp/metadata.xml b/sci-chemistry/ssp/metadata.xml index bce834c0c..713d21566 100644 --- a/sci-chemistry/ssp/metadata.xml +++ b/sci-chemistry/ssp/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - </maintainer> -<maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/talosn/metadata.xml b/sci-chemistry/talosn/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/talosn/metadata.xml +++ b/sci-chemistry/talosn/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/trajng/metadata.xml b/sci-chemistry/trajng/metadata.xml index c2dc1568a..7daa2ce7e 100644 --- a/sci-chemistry/trajng/metadata.xml +++ b/sci-chemistry/trajng/metadata.xml @@ -5,7 +5,7 @@ <email>alexxy@gentoo.org</email> <name>Alexey Shvetsov</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-chemistry@gentoo.org</email> <name>Gentoo Chemistry Project</name> </maintainer> diff --git a/sci-chemistry/unio/metadata.xml b/sci-chemistry/unio/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/unio/metadata.xml +++ b/sci-chemistry/unio/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/usf-tools/metadata.xml b/sci-chemistry/usf-tools/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-chemistry/usf-tools/metadata.xml +++ b/sci-chemistry/usf-tools/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-chemistry/wxmacmolplt/metadata.xml b/sci-chemistry/wxmacmolplt/metadata.xml index fa784e844..40ac1e07c 100644 --- a/sci-chemistry/wxmacmolplt/metadata.xml +++ b/sci-chemistry/wxmacmolplt/metadata.xml @@ -1,23 +1,23 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> wxMacMolPlt is a program for plotting 3D molecular structures and normal modes (vibrations), various orbitals and electron density maps. It reads a variety of file formats including any GAMESS input, log or IRC file directly to create animations. It has a simple GAMESS input (.inp) builder and a primitive molecule builder. </longdescription> - <use> - <flag name="flash"> + <use> + <flag name="flash"> Add support for flash movie generation using <pkg>media-libs/ming</pkg> </flag> - </use> - <upstream> - <remote-id type="github">brettbode/wxmacmolplt</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="github">brettbode/wxmacmolplt</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-chemistry/xplor-nih/metadata.xml b/sci-chemistry/xplor-nih/metadata.xml index 7c5a822d2..b7595a302 100644 --- a/sci-chemistry/xplor-nih/metadata.xml +++ b/sci-chemistry/xplor-nih/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - <name>Justin Lecher</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + <name>Justin Lecher</name> + </maintainer> </pkgmetadata> diff --git a/sci-electronics/minipro/metadata.xml b/sci-electronics/minipro/metadata.xml index 35f8f7cd4..430c9ea1b 100644 --- a/sci-electronics/minipro/metadata.xml +++ b/sci-electronics/minipro/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-electronics@gentoo.org</email> - <name>Gentoo Electronics Project</name> - </maintainer> - <upstream> - <remote-id type="github">vdudouyt/minipro</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-electronics@gentoo.org</email> + <name>Gentoo Electronics Project</name> + </maintainer> + <upstream> + <remote-id type="github">vdudouyt/minipro</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-electronics/player/metadata.xml b/sci-electronics/player/metadata.xml index f6e040f1e..ddd7312d4 100644 --- a/sci-electronics/player/metadata.xml +++ b/sci-electronics/player/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-electronics@gentoo.org</email> - <name>Gentoo Electronics Project</name> - </maintainer> - <use> - <flag name="sphinx2">Automatically generated description for sphinx2</flag> - <flag name="boost">Automatically generated description for boost</flag> - <flag name="openssl">Automatically generated description for openssl</flag> - <flag name="festival">Automatically generated description for festival</flag> - </use> - <upstream> - <remote-id type="sourceforge">playerstage</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-electronics@gentoo.org</email> + <name>Gentoo Electronics Project</name> + </maintainer> + <use> + <flag name="sphinx2">Automatically generated description for sphinx2</flag> + <flag name="boost">Automatically generated description for boost</flag> + <flag name="openssl">Automatically generated description for openssl</flag> + <flag name="festival">Automatically generated description for festival</flag> + </use> + <upstream> + <remote-id type="sourceforge">playerstage</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-electronics/stage/metadata.xml b/sci-electronics/stage/metadata.xml index 8dfe10e85..c131c2eda 100644 --- a/sci-electronics/stage/metadata.xml +++ b/sci-electronics/stage/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-electronics@gentoo.org</email> - <name>Gentoo Electronics Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">playerstage</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-electronics@gentoo.org</email> + <name>Gentoo Electronics Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">playerstage</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-electronics/tnt/metadata.xml b/sci-electronics/tnt/metadata.xml index 892756178..28b4e4efa 100644 --- a/sci-electronics/tnt/metadata.xml +++ b/sci-electronics/tnt/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-electronics@gentoo.org</email> - <name>Gentoo Electronics Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">mmtl</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-electronics@gentoo.org</email> + <name>Gentoo Electronics Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">mmtl</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap/metadata.xml b/sci-geosciences/pydap/metadata.xml index 35bc07d09..aa3cb8c7d 100644 --- a/sci-geosciences/pydap/metadata.xml +++ b/sci-geosciences/pydap/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. </longdescription> - <upstream> - <remote-id type="pypi">Pydap</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">Pydap</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_handlers_csv/metadata.xml b/sci-geosciences/pydap_handlers_csv/metadata.xml index 3dd98b3b7..a34c29f27 100644 --- a/sci-geosciences/pydap_handlers_csv/metadata.xml +++ b/sci-geosciences/pydap_handlers_csv/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_handlers_csv allows Pydap server to serve CSV formatted files. </longdescription> - <upstream> - <remote-id type="pypi">pydap.handlers.csv</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.handlers.csv</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_handlers_hdf5/metadata.xml b/sci-geosciences/pydap_handlers_hdf5/metadata.xml index 011fb0cc9..d263e9011 100644 --- a/sci-geosciences/pydap_handlers_hdf5/metadata.xml +++ b/sci-geosciences/pydap_handlers_hdf5/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_handlers_hdf5 allows Pydap server to serve hdf5 formatted files. </longdescription> - <upstream> - <remote-id type="pypi">pydap.handlers.hdf5</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.handlers.hdf5</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_handlers_nca/metadata.xml b/sci-geosciences/pydap_handlers_nca/metadata.xml index eabcc1cd3..bdbf6ec0b 100644 --- a/sci-geosciences/pydap_handlers_nca/metadata.xml +++ b/sci-geosciences/pydap_handlers_nca/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_handlers_nca allows Pydap server to serve aggregated NetCDF formatted files. </longdescription> - <upstream> - <remote-id type="pypi">pydap.handlers.nca</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.handlers.nca</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_handlers_netcdf/metadata.xml b/sci-geosciences/pydap_handlers_netcdf/metadata.xml index de6bf5fbd..5ad5d48a7 100644 --- a/sci-geosciences/pydap_handlers_netcdf/metadata.xml +++ b/sci-geosciences/pydap_handlers_netcdf/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_handlers_netcdf allows Pydap server to serve NetCDF formatted files. </longdescription> - <upstream> - <remote-id type="pypi">pydap.handlers.netcdf</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.handlers.netcdf</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_handlers_proxy/metadata.xml b/sci-geosciences/pydap_handlers_proxy/metadata.xml index 3e3f499fd..52278b45f 100644 --- a/sci-geosciences/pydap_handlers_proxy/metadata.xml +++ b/sci-geosciences/pydap_handlers_proxy/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_handlers_proxy allows Pydap server to serve data from other web sites. </longdescription> - <upstream> - <remote-id type="pypi">pydap.handlers.proxy</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.handlers.proxy</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_handlers_sqlite/metadata.xml b/sci-geosciences/pydap_handlers_sqlite/metadata.xml index 22de7b516..f82089bd9 100644 --- a/sci-geosciences/pydap_handlers_sqlite/metadata.xml +++ b/sci-geosciences/pydap_handlers_sqlite/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_handlers_sqlite allows Pydap server to serve data from SQLite files. </longdescription> - <upstream> - <remote-id type="pypi">pydap.handlers.sqlite</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.handlers.sqlite</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_responses_kml/metadata.xml b/sci-geosciences/pydap_responses_kml/metadata.xml index b6268e323..8eb4a652f 100644 --- a/sci-geosciences/pydap_responses_kml/metadata.xml +++ b/sci-geosciences/pydap_responses_kml/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_responses_kml allows Pydap server to use Google Earth to visualize data. </longdescription> - <upstream> - <remote-id type="pypi">pydap.responses.kml</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.responses.kml</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_responses_matlab/metadata.xml b/sci-geosciences/pydap_responses_matlab/metadata.xml index 8f1b6dc9c..323abf1c2 100644 --- a/sci-geosciences/pydap_responses_matlab/metadata.xml +++ b/sci-geosciences/pydap_responses_matlab/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_responses_matlab allows Pydap server to deliver data to Matlab. </longdescription> - <upstream> - <remote-id type="pypi">pydap.responses.matlab</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.responses.matlab</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_responses_netcdf/metadata.xml b/sci-geosciences/pydap_responses_netcdf/metadata.xml index 79bf09ab5..25cbef43d 100644 --- a/sci-geosciences/pydap_responses_netcdf/metadata.xml +++ b/sci-geosciences/pydap_responses_netcdf/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_responses_netcdf allows Pydap server to serve NetCDF formatted files. </longdescription> - <upstream> - <remote-id type="pypi">pydap.responses.netcdf</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.responses.netcdf</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_responses_wms/metadata.xml b/sci-geosciences/pydap_responses_wms/metadata.xml index 3f0ffe7a7..a980f0ad8 100644 --- a/sci-geosciences/pydap_responses_wms/metadata.xml +++ b/sci-geosciences/pydap_responses_wms/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_responses_wms allows Pydap server to deliver maps via Web Mapping Service protocol. </longdescription> - <upstream> - <remote-id type="pypi">pydap.responses.wms</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.responses.wms</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/pydap_responses_xls/metadata.xml b/sci-geosciences/pydap_responses_xls/metadata.xml index 95202601c..b71bee715 100644 --- a/sci-geosciences/pydap_responses_xls/metadata.xml +++ b/sci-geosciences/pydap_responses_xls/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Pydap is a pure Python library implementing the Data Access Protocol. pydap_responses_xls allows Pydap server to deliver an Excel file of the data. </longdescription> - <upstream> - <remote-id type="pypi">pydap.responses.xls</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pydap.responses.xls</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-geosciences/qgis/metadata.xml b/sci-geosciences/qgis/metadata.xml index a476a4b69..08f842de1 100644 --- a/sci-geosciences/qgis/metadata.xml +++ b/sci-geosciences/qgis/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Quantum GIS (QGIS) is a user friendly Open Source Geographic Information System (GIS). QGIS supports vector, raster, and database formats. QGIS lets you browse and create map data on your @@ -13,7 +13,7 @@ ShapeFile, geotiff). QGIS supports plugins to do things like display tracks from your GPS. </longdescription> - <use> - <flag name="grass">Add support for <pkg>sci-geosciences/grass</pkg></flag> - </use> + <use> + <flag name="grass">Add support for <pkg>sci-geosciences/grass</pkg></flag> + </use> </pkgmetadata> diff --git a/sci-libs/amber99sb_phipsi/metadata.xml b/sci-libs/amber99sb_phipsi/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-libs/amber99sb_phipsi/metadata.xml +++ b/sci-libs/amber99sb_phipsi/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/amber99sbnmr-ildn/metadata.xml b/sci-libs/amber99sbnmr-ildn/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-libs/amber99sbnmr-ildn/metadata.xml +++ b/sci-libs/amber99sbnmr-ildn/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/amber99sbnmr/metadata.xml b/sci-libs/amber99sbnmr/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-libs/amber99sbnmr/metadata.xml +++ b/sci-libs/amber99sbnmr/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/amdlibm/metadata.xml b/sci-libs/amdlibm/metadata.xml index 75ed97c36..c2d85a590 100644 --- a/sci-libs/amdlibm/metadata.xml +++ b/sci-libs/amdlibm/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> AMD LibM is a software library containing a collection of basic math functions optimized for x86-64 processor based machines. It provides many routines from the list of standard C99 math functions. diff --git a/sci-libs/armadillo/metadata.xml b/sci-libs/armadillo/metadata.xml index 140530ac3..1299b679e 100644 --- a/sci-libs/armadillo/metadata.xml +++ b/sci-libs/armadillo/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Armadillo is a C++ linear algebra library (matrix maths) aiming towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a @@ -17,27 +17,27 @@ need for temporaries. This is accomplished through recursive templates and template meta-programming. </longdescription> - <use> - <flag name="atlas"> + <use> + <flag name="atlas"> Link with <pkg>sci-libs/atlas</pkg> libraries for cblas and clapack </flag> - <flag name="arpack"> + <flag name="arpack"> Link with <pkg>sci-libs/arpack</pkg> libraries for eigen decomposition </flag> - <flag name="mkl"> + <flag name="mkl"> Use matrix allocation from the Intel MKL <pkg>sci-libs/mkl</pkg> </flag> - <flag name="tbb"> + <flag name="tbb"> Use matrix allocation from the Threads Building Blocks <pkg>dev-cpp/tbb</pkg> </flag> - <flag name="superlu"> + <flag name="superlu"> Use SuperLU for sparse linear equation solving <pkg>sci-libs/superlu</pkg> </flag> - </use> - <upstream> - <remote-id type="sourceforge">arma</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="sourceforge">arma</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/arrayfire/metadata.xml b/sci-libs/arrayfire/metadata.xml index 994d7bb3d..92f4df681 100644 --- a/sci-libs/arrayfire/metadata.xml +++ b/sci-libs/arrayfire/metadata.xml @@ -1,42 +1,42 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> ArrayFire is a high performance software library for parallel computing with an easy-to-use API. Its array based function set makes parallel programming simple. ArrayFire's multiple backends (CUDA, OpenCL and native CPU) make it platform independent and highly portable. </longdescription> - <use> - <flag name="cpu"> + <use> + <flag name="cpu"> Build CPU backend. </flag> - <flag name="cuda"> + <flag name="cuda"> Build CUDA backend. </flag> - <flag name="opencl"> + <flag name="opencl"> Build OpenCL backend. </flag> - <flag name="nonfree"> + <flag name="nonfree"> Build ArrayFire nonfree algorithms. </flag> - <flag name="graphics"> + <flag name="graphics"> Build with Forge graphics. </flag> - <flag name="unified"> + <flag name="unified"> Build Backend-Independent API. </flag> - </use> - <upstream> - <remote-id type="github">google/googletest</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="github">google/googletest</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/asl/metadata.xml b/sci-libs/asl/metadata.xml index 406d94b4d..67e30e687 100644 --- a/sci-libs/asl/metadata.xml +++ b/sci-libs/asl/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bircoph@gentoo.org</email> - <name>Andrew Savchenko</name> - </maintainer> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>bircoph@gentoo.org</email> + <name>Andrew Savchenko</name> + </maintainer> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> Advanced Simulation Library (ASL) is a free and open source hardware accelerated multiphysics simulation platform (and an extensible general purpose tool for solving Partial Differential Equations). Its @@ -28,10 +28,10 @@ process data validation and reconciliation, image-guided surgery, computer-aided engineering, design space exploration, crystallography, etc. </longdescription> - <use> - <flag name="matlab">Matlab support with <pkg>sci-libs/matio</pkg></flag> - </use> - <upstream> - <remote-id type="github">AvtechScientific/ASL</remote-id> - </upstream> + <use> + <flag name="matlab">Matlab support with <pkg>sci-libs/matio</pkg></flag> + </use> + <upstream> + <remote-id type="github">AvtechScientific/ASL</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/atlas/metadata.xml b/sci-libs/atlas/metadata.xml index b77adaad5..545ee570b 100644 --- a/sci-libs/atlas/metadata.xml +++ b/sci-libs/atlas/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> ATLAS is an approach for the automatic generation and optimization of numerical software. Currently ATLAS supplies optimized versions for the complete set of linear algebra kernels known as the Basic Linear Algebra @@ -13,12 +13,12 @@ a subset of the linear algebra routine LAPACK library or the full LAPACK using the reference LAPACK from Netlib. </longdescription> - <use> - <flag name="deprecated">Build deprecated routines</flag> - <flag name="generic">Build atlas assuming a fairly generic architecture (sse2 for x86, core2 for amd64)</flag> - <flag name="ifko">Use iFKO to improve ATLAS performance (ATTENTION!!! Increases builtime enormously)</flag> - </use> - <upstream> - <remote-id type="sourceforge">math-atlas</remote-id> - </upstream> + <use> + <flag name="deprecated">Build deprecated routines</flag> + <flag name="generic">Build atlas assuming a fairly generic architecture (sse2 for x86, core2 for amd64)</flag> + <flag name="ifko">Use iFKO to improve ATLAS performance (ATTENTION!!! Increases builtime enormously)</flag> + </use> + <upstream> + <remote-id type="sourceforge">math-atlas</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/bigdft-abi/metadata.xml b/sci-libs/bigdft-abi/metadata.xml index 59ce9fb3d..9389ce33a 100644 --- a/sci-libs/bigdft-abi/metadata.xml +++ b/sci-libs/bigdft-abi/metadata.xml @@ -1,29 +1,29 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> BigDFT is a package whose main program allows one to find the total energy, charge density and electronic structure of systems made of electrons and nuclei (molecules and periodic solids) within Density Functional Theory (DFT), using pseudopotentials and a wavelets basis. BigDFT-ABI is its fork by ABINIT developers to serve as a library for sci-physics/abinit. </longdescription> - <use> - <flag name="cuda">Enable support for nVidia CUDA</flag> - <flag name="etsf_io"> + <use> + <flag name="cuda">Enable support for nVidia CUDA</flag> + <flag name="etsf_io"> Enable support for reading and writing the European Theoretical Spectroscopy facility (ETSF) file format </flag> - <flag name="glib"> + <flag name="glib"> Compile with GLib Object System support </flag> - <flag name="opencl">Enable support for OpenCL GPU acceleration</flag> - <flag name="scalapack"> + <flag name="opencl">Enable support for OpenCL GPU acceleration</flag> + <flag name="scalapack"> Use ScaLAPACK, a subset of LAPACK routines redesigned for heterogenous computing </flag> - </use> + </use> </pkgmetadata> diff --git a/sci-libs/blas-reference/metadata.xml b/sci-libs/blas-reference/metadata.xml index 347cfa2c7..28c34164e 100644 --- a/sci-libs/blas-reference/metadata.xml +++ b/sci-libs/blas-reference/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The BLAS (Basic Linear Algebra Subprograms) are high quality "building block" routines for performing basic vector and matrix operations. Level 1 BLAS do vector-vector operations, Level 2 BLAS do matrix-vector operations, @@ -14,7 +14,7 @@ development of high quality linear algebra software, LAPACK for example. This packages implements the reference FORTRAN 77 library. </longdescription> - <use> - <flag name="int64">Build the 64 bits integer library</flag> - </use> + <use> + <flag name="int64">Build the 64 bits integer library</flag> + </use> </pkgmetadata> diff --git a/sci-libs/blastdb/metadata.xml b/sci-libs/blastdb/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-libs/blastdb/metadata.xml +++ b/sci-libs/blastdb/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/bloom/metadata.xml b/sci-libs/bloom/metadata.xml index ea4817fa3..c6496f530 100644 --- a/sci-libs/bloom/metadata.xml +++ b/sci-libs/bloom/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">arashpartow/bloom</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">arashpartow/bloom</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/calculix-ccx/metadata.xml b/sci-libs/calculix-ccx/metadata.xml index aecb232b9..a62eacf73 100644 --- a/sci-libs/calculix-ccx/metadata.xml +++ b/sci-libs/calculix-ccx/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <use> - <flag name="arpack"> Add sparse eigen value support via sci-libs/arpack </flag> - </use> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <use> + <flag name="arpack"> Add sparse eigen value support via sci-libs/arpack </flag> + </use> </pkgmetadata> diff --git a/sci-libs/cblas-reference/metadata.xml b/sci-libs/cblas-reference/metadata.xml index c43dfae1b..975ef184b 100644 --- a/sci-libs/cblas-reference/metadata.xml +++ b/sci-libs/cblas-reference/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The BLAS (Basic Linear Algebra Subprograms) are high quality "building block" routines for performing basic vector and matrix operations. Level 1 BLAS do vector-vector operations, Level 2 BLAS do matrix-vector operations, @@ -15,7 +15,7 @@ example. This packages implements the reference C library as a wrapper to the FORTRAN 77 BLAS library. </longdescription> - <use> - <flag name="int64">Build the 64 bits integer library</flag> - </use> + <use> + <flag name="int64">Build the 64 bits integer library</flag> + </use> </pkgmetadata> diff --git a/sci-libs/ccif/metadata.xml b/sci-libs/ccif/metadata.xml index f9c187d47..5ace1a994 100644 --- a/sci-libs/ccif/metadata.xml +++ b/sci-libs/ccif/metadata.xml @@ -4,7 +4,7 @@ <maintainer type="person"> <email>jlec@gentoo.org</email> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci@gentoo.org</email> <name>Gentoo Science Project</name> </maintainer> diff --git a/sci-libs/cgnstools/metadata.xml b/sci-libs/cgnstools/metadata.xml index 2f9d93947..32379f114 100644 --- a/sci-libs/cgnstools/metadata.xml +++ b/sci-libs/cgnstools/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">cgns</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">cgns</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/clblas/metadata.xml b/sci-libs/clblas/metadata.xml index 7a91a3efe..0af0653f6 100644 --- a/sci-libs/clblas/metadata.xml +++ b/sci-libs/clblas/metadata.xml @@ -1,29 +1,29 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> clBLAS is the code for the OpenCL BLAS portion of clMath. The complete set of BLAS level 1, 2 and 3 routines is implemented. See Netlib BLAS for the list of supported routines. In addition to GPU devices, the library also supports running on CPU devices to facilitate debugging and multicore programming. </longdescription> - <use> - <flag name="client"> + <use> + <flag name="client"> Build a command line clBLAS client program. </flag> - <flag name="ktest"> + <flag name="ktest"> A command line tool for testing single clBLAS kernel. </flag> - <flag name="performance"> + <flag name="performance"> Copy performance scripts that can measure and graph performance. </flag> - </use> - <upstream> - <remote-id type="github">clMathLibraries/clBLAS</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="github">clMathLibraries/clBLAS</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/clfft/metadata.xml b/sci-libs/clfft/metadata.xml index 659e5bb01..993a58197 100644 --- a/sci-libs/clfft/metadata.xml +++ b/sci-libs/clfft/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> clFFT is a software library containing FFT functions written in OpenCL. In addition to GPU devices, the libraries also support running on CPU devices to facilitate debugging and multicore @@ -17,15 +17,15 @@ clFFT is part of the clMath sofware library, which is the successor of APPML. </longdescription> - <use> - <flag name="callback_client"> + <use> + <flag name="callback_client"> Build a command line clFFT client program that tests callback functionality. </flag> - <flag name="client"> + <flag name="client"> Build a command line clFFT client program. </flag> - </use> - <upstream> - <remote-id type="github">clMathLibraries/clFFT</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="github">clMathLibraries/clFFT</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/clrng/metadata.xml b/sci-libs/clrng/metadata.xml index c6c675038..1fc6b6d43 100644 --- a/sci-libs/clrng/metadata.xml +++ b/sci-libs/clrng/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <use> - <flag name="client"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <use> + <flag name="client"> Build a command line clRNG client program. </flag> - </use> - <upstream> - <remote-id type="github">clMathLibraries/clRNG</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="github">clMathLibraries/clRNG</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/cs-rosetta-db/metadata.xml b/sci-libs/cs-rosetta-db/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-libs/cs-rosetta-db/metadata.xml +++ b/sci-libs/cs-rosetta-db/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/dcmtk/metadata.xml b/sci-libs/dcmtk/metadata.xml index fe4338acb..42de27d5c 100644 --- a/sci-libs/dcmtk/metadata.xml +++ b/sci-libs/dcmtk/metadata.xml @@ -1,18 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> DCMTK is a collection of libraries and applications implementing large parts the DICOM standard. It includes software for examining, constructing and converting DICOM image files, handling offline media, sending and receiving images over a network connection, as well as demonstrative image storage and worklist servers. </longdescription> - <longdescription lang="fr"> + <longdescription lang="fr"> DCMTK est un ensemble de bibliothèques et d'application implémentant une grande partie du standard DICOM. Cela comprend des logiciels de visualisation et de conversion des fichier image, de manipulation de diff --git a/sci-libs/dealii/metadata.xml b/sci-libs/dealii/metadata.xml index ec7db76e8..73c0c33a0 100644 --- a/sci-libs/dealii/metadata.xml +++ b/sci-libs/dealii/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-libs/dtk/metadata.xml b/sci-libs/dtk/metadata.xml index 92ff8e86b..1933d4c95 100644 --- a/sci-libs/dtk/metadata.xml +++ b/sci-libs/dtk/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-libs/elmer-eio/metadata.xml b/sci-libs/elmer-eio/metadata.xml index cab7f518f..070aa2029 100644 --- a/sci-libs/elmer-eio/metadata.xml +++ b/sci-libs/elmer-eio/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">svn</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">svn</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/elmer-hutiter/metadata.xml b/sci-libs/elmer-hutiter/metadata.xml index cab7f518f..070aa2029 100644 --- a/sci-libs/elmer-hutiter/metadata.xml +++ b/sci-libs/elmer-hutiter/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">svn</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">svn</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/fast5/metadata.xml b/sci-libs/fast5/metadata.xml index f68a1b6fa..138cb7705 100644 --- a/sci-libs/fast5/metadata.xml +++ b/sci-libs/fast5/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/fdlibm/metadata.xml b/sci-libs/fdlibm/metadata.xml index 17ece26f8..af6aeed88 100644 --- a/sci-libs/fdlibm/metadata.xml +++ b/sci-libs/fdlibm/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> FDLIBM (Freely Distributable LIBM) is a C math library for machines that support IEEE 754 floating-point arithmetic. In this release, only double precision is supported. diff --git a/sci-libs/fgsl/metadata.xml b/sci-libs/fgsl/metadata.xml index 628e00685..51d30f204 100644 --- a/sci-libs/fgsl/metadata.xml +++ b/sci-libs/fgsl/metadata.xml @@ -1,13 +1,13 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription>FGSL: A Fortran interface to the GNU Scientific Library</longdescription> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>FGSL: A Fortran interface to the GNU Scientific Library</longdescription> </pkgmetadata> diff --git a/sci-libs/fox/metadata.xml b/sci-libs/fox/metadata.xml index fbb7cbc34..2f8a48b9f 100644 --- a/sci-libs/fox/metadata.xml +++ b/sci-libs/fox/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<use> - <flag name="dom">Compile the W3C document object model module</flag> - <flag name="fast">Compile with best known optimization flags</flag> - <flag name="sax">Compile the streaming, validating parser based on java's Simple API for XML</flag> - <flag name="wcml">Compile the module for a subset of the Chemical Markup Language</flag> - <flag name="wkml">Compile the module for the creation of KML documents used by applications such as Google Earth</flag> - <flag name="wxml">Compile the XML writer used to sequentially create arbitrary XML documents quickly with minimal memory requirements</flag> - </use> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <use> + <flag name="dom">Compile the W3C document object model module</flag> + <flag name="fast">Compile with best known optimization flags</flag> + <flag name="sax">Compile the streaming, validating parser based on java's Simple API for XML</flag> + <flag name="wcml">Compile the module for a subset of the Chemical Markup Language</flag> + <flag name="wkml">Compile the module for the creation of KML documents used by applications such as Google Earth</flag> + <flag name="wxml">Compile the XML writer used to sequentially create arbitrary XML documents quickly with minimal memory requirements</flag> + </use> </pkgmetadata> diff --git a/sci-libs/framewave/metadata.xml b/sci-libs/framewave/metadata.xml index ca9638e58..51caca683 100644 --- a/sci-libs/framewave/metadata.xml +++ b/sci-libs/framewave/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/sci-libs/geom/metadata.xml b/sci-libs/geom/metadata.xml index 1c94e0081..d322fedbb 100644 --- a/sci-libs/geom/metadata.xml +++ b/sci-libs/geom/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/sci-libs/ghmm/metadata.xml b/sci-libs/ghmm/metadata.xml index 985e58deb..5fc8aa771 100644 --- a/sci-libs/ghmm/metadata.xml +++ b/sci-libs/ghmm/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">ghmm</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">ghmm</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/gmsh/metadata.xml b/sci-libs/gmsh/metadata.xml index 8352a542f..8c538ca2a 100644 --- a/sci-libs/gmsh/metadata.xml +++ b/sci-libs/gmsh/metadata.xml @@ -1,19 +1,19 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <use> - <flag name="chaco"> Enables chaco partitioner support</flag> - <flag name="cgns"> Enables cgns output support</flag> - <flag name="metis"> Enables metis support</flag> - <flag name="med"> Enables med support</flag> - <flag name="netgen"> Enable 3D Frontal triangulation using netgen lib</flag> - <flag name="petsc"> Enable sci-mathematics/petsc support</flag> - <flag name="opencascade"> Enable OpenCASCADE support</flag> - <flag name="taucs"> Enable sci-libs/taucs support</flag> - <flag name="tetgen"> Enable 3D delauny triangulation using tetgen lib</flag> - </use> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <use> + <flag name="chaco"> Enables chaco partitioner support</flag> + <flag name="cgns"> Enables cgns output support</flag> + <flag name="metis"> Enables metis support</flag> + <flag name="med"> Enables med support</flag> + <flag name="netgen"> Enable 3D Frontal triangulation using netgen lib</flag> + <flag name="petsc"> Enable sci-mathematics/petsc support</flag> + <flag name="opencascade"> Enable OpenCASCADE support</flag> + <flag name="taucs"> Enable sci-libs/taucs support</flag> + <flag name="tetgen"> Enable 3D delauny triangulation using tetgen lib</flag> + </use> </pkgmetadata> diff --git a/sci-libs/gotoblas2/metadata.xml b/sci-libs/gotoblas2/metadata.xml index d808dc157..acaa18f2f 100644 --- a/sci-libs/gotoblas2/metadata.xml +++ b/sci-libs/gotoblas2/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The GotoBLAS codes are one of the fastest implementations of the Basic Linear Algebra Subroutines(BLAS). To achieve performance it starts by observing that for current @@ -14,8 +14,8 @@ is also taken into consideration, it is the minimization of such TLB misses that drives the approach. </longdescription> - <use> - <flag name="int64">Build the 64 bits integer library</flag> - <flag name="incblas">Build the CBLAS interface</flag> - </use> + <use> + <flag name="int64">Build the 64 bits integer library</flag> + <flag name="incblas">Build the CBLAS interface</flag> + </use> </pkgmetadata> diff --git a/sci-libs/gsl/metadata.xml b/sci-libs/gsl/metadata.xml index 6e2e8e11f..0382d5709 100644 --- a/sci-libs/gsl/metadata.xml +++ b/sci-libs/gsl/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The GNU Scientific Library (GSL) is a collection of routines for numerical analysis. The routines are written from scratch by the GSL team in C, and present a modern API for C programmers, while allowing @@ -18,8 +18,8 @@ differential equations, quadrature, Monte Carlo integration, special functions, physical constants, and much more. </longdescription> - <use> - <flag name="cblas-external">Link gsl with external cblas provided by + <use> + <flag name="cblas-external">Link gsl with external cblas provided by (<pkg>virtual/cblas</pkg>) instead of shipped internal version</flag> - </use> + </use> </pkgmetadata> diff --git a/sci-libs/htslib-plugins/metadata.xml b/sci-libs/htslib-plugins/metadata.xml index 49735ee17..91c0a5850 100644 --- a/sci-libs/htslib-plugins/metadata.xml +++ b/sci-libs/htslib-plugins/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">samtools</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">samtools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/iRODS/metadata.xml b/sci-libs/iRODS/metadata.xml index 49735ee17..91c0a5850 100644 --- a/sci-libs/iRODS/metadata.xml +++ b/sci-libs/iRODS/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">samtools</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">samtools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/io_lib/metadata.xml b/sci-libs/io_lib/metadata.xml index 9012caf9b..228ee6ac8 100644 --- a/sci-libs/io_lib/metadata.xml +++ b/sci-libs/io_lib/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> io_lib is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. The programmer simply calls the (eg) read_reading to create a "Read" C structure with the data loaded into memory. </longdescription> - <upstream> - <remote-id type="sourceforge">staden</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">staden</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/ipp/metadata.xml b/sci-libs/ipp/metadata.xml index b61694fd8..8beb35c83 100644 --- a/sci-libs/ipp/metadata.xml +++ b/sci-libs/ipp/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Intel(R) Integrated Performance Primitives (Intel(R) IPP) is a library of multi-core-ready, optimized software functions for multimedia data processing, and communications applications. diff --git a/sci-libs/itk/metadata.xml b/sci-libs/itk/metadata.xml index b7fbbe52f..34d691187 100644 --- a/sci-libs/itk/metadata.xml +++ b/sci-libs/itk/metadata.xml @@ -1,24 +1,24 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>maintainer-wanted@gentoo.org</email> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>maintainer-wanted@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> Insight Segmentation and Registration Toolkit (ITK) is a library that provides developers with an extensive suite of tools for image analysis. </longdescription> - <use> - <flag name="itkv3compat">Enable compatibility with ITK version 3</flag> - <flag name="review">Enable compilation of methods under review</flag> - <flag name="vtkglue">PLEASE FIX MY DESCRIPTION</flag> - </use> - <upstream> - <remote-id type="sourceforge">itk</remote-id> - </upstream> + <use> + <flag name="itkv3compat">Enable compatibility with ITK version 3</flag> + <flag name="review">Enable compilation of methods under review</flag> + <flag name="vtkglue">PLEASE FIX MY DESCRIPTION</flag> + </use> + <upstream> + <remote-id type="sourceforge">itk</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/jhdf5/metadata.xml b/sci-libs/jhdf5/metadata.xml index 1699e58b2..138cb7705 100644 --- a/sci-libs/jhdf5/metadata.xml +++ b/sci-libs/jhdf5/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -<maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/k3match/metadata.xml b/sci-libs/k3match/metadata.xml index 8e26a7cc2..27bcacd8e 100644 --- a/sci-libs/k3match/metadata.xml +++ b/sci-libs/k3match/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>AstroFloyd@gmail.com</email> - <name>AstroFloyd</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="person"> + <email>AstroFloyd@gmail.com</email> + <name>AstroFloyd</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/lapack-reference/metadata.xml b/sci-libs/lapack-reference/metadata.xml index 269de234f..a4febbfd5 100644 --- a/sci-libs/lapack-reference/metadata.xml +++ b/sci-libs/lapack-reference/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The Linear Algebra PACKage (LAPACK) is a comprehensive library that does linear algebra operations including matrix inversions, least squared solutions to linear sets of equations, eigenvector analysis, @@ -15,11 +15,11 @@ Netlib for LAPACK and optionnally the one for the Basic Linear Algebra Subprogram (BLAS). </longdescription> - <use> - <flag name="deprecated">Build deprecated routines</flag> - <flag name="int64">Build the 64 bits integer library</flag> - <flag name="xblas"> + <use> + <flag name="deprecated">Build deprecated routines</flag> + <flag name="int64">Build the 64 bits integer library</flag> + <flag name="xblas"> Build LAPACK with extra precision (needs <pkg>sci-libs/xblas</pkg>) </flag> - </use> + </use> </pkgmetadata> diff --git a/sci-libs/lapacke-reference/metadata.xml b/sci-libs/lapacke-reference/metadata.xml index 7c0871558..be7671ae7 100644 --- a/sci-libs/lapacke-reference/metadata.xml +++ b/sci-libs/lapacke-reference/metadata.xml @@ -1,19 +1,19 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> This implementation provides a native C interface to LAPACK routines available at www.netlib.org/lapack to facilitate usage of LAPACK functionality for C programmers. </longdescription> - <use> - <flag name="deprecated">Build deprecated routines</flag> - <flag name="tmg">Build LAPACKE with a Test Matrix Generator library</flag> - <flag name="xblas">Build LAPACKE with extra precision (needs + <use> + <flag name="deprecated">Build deprecated routines</flag> + <flag name="tmg">Build LAPACKE with a Test Matrix Generator library</flag> + <flag name="xblas">Build LAPACKE with extra precision (needs <pkg>sci-libs/xblas</pkg>)</flag> - </use> + </use> </pkgmetadata> diff --git a/sci-libs/lapackpp/metadata.xml b/sci-libs/lapackpp/metadata.xml index af87df9d1..cc5b2bc94 100644 --- a/sci-libs/lapackpp/metadata.xml +++ b/sci-libs/lapackpp/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> LAPACK++ (Linear Algebra PACKage in C++) is a software library for numerical linear algebra that solves systems of linear equations and eigenvalue problems on high performance computer architectures. @@ -17,7 +17,7 @@ matrices, symmetric positive definite systems, and solving linear least-square systems. </longdescription> - <upstream> - <remote-id type="sourceforge">lapackpp</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">lapackpp</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/lib2bit/metadata.xml b/sci-libs/lib2bit/metadata.xml index 1f37ac0f9..de0ee97de 100644 --- a/sci-libs/lib2bit/metadata.xml +++ b/sci-libs/lib2bit/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">dpryan79/lib2bit</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">dpryan79/lib2bit</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/libStatGen/metadata.xml b/sci-libs/libStatGen/metadata.xml index 41b69bc9c..eafa6ae71 100644 --- a/sci-libs/libStatGen/metadata.xml +++ b/sci-libs/libStatGen/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">statgen/libStatGen</remote-id> - </upstream> + <maintainer type="person"> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">statgen/libStatGen</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/libcgnsoo/metadata.xml b/sci-libs/libcgnsoo/metadata.xml index 9954178df..b501da7f8 100644 --- a/sci-libs/libcgnsoo/metadata.xml +++ b/sci-libs/libcgnsoo/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/sci-libs/libgeodecomp/metadata.xml b/sci-libs/libgeodecomp/metadata.xml index 3d67af3bc..d854cb35c 100644 --- a/sci-libs/libgeodecomp/metadata.xml +++ b/sci-libs/libgeodecomp/metadata.xml @@ -1,41 +1,41 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <longdescription> + <longdescription> LibGeoDecomp is an auto-parallelizing library to speed up stencil code based computer simulations. It runs on virtually all current architectures, be it multi-cores, GPUs, or large scale MPI clusters. </longdescription> - <maintainer type="person"> - <email>gentryx@gmx.de</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="cuda"> + <maintainer type="person"> + <email>gentryx@gmx.de</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="cuda"> Enables plugins for NVIDIA GPUs (e.g. CUDASimulator and CUDAStepper) </flag> - <flag name="hpx"> + <flag name="hpx"> Activates the HPX backend as an alternative to the usual MPI backends. </flag> - <flag name="opencl"> + <flag name="opencl"> Builds those plugins which can offload to OpenCL devices. </flag> - <flag name="opencv"> + <flag name="opencv"> Some input components can read from cameras etc. via OpenCV </flag> - <flag name="qt4"> + <flag name="qt4"> Adds the QTWidgetWriter, which allows in situ visualization of a running simulation. </flag> - <flag name="scotch"> + <flag name="scotch"> Optinally use Scotch for domain decomposition. </flag> - <flag name="visit"> + <flag name="visit"> Add in situ visualization for big simulations via VisIt. </flag> - </use> + </use> </pkgmetadata> diff --git a/sci-libs/libmatheval/metadata.xml b/sci-libs/libmatheval/metadata.xml index a8765297a..78f3bb0e2 100644 --- a/sci-libs/libmatheval/metadata.xml +++ b/sci-libs/libmatheval/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="person"> -<email>tomka@gentoo.org</email> -<name>Thomas Kahle</name> -</maintainer> -<maintainer type="project"> -<email>sci@gentoo.org</email> -<name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="person"> + <email>tomka@gentoo.org</email> + <name>Thomas Kahle</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> GNU libmatheval is a library (callable from C and Fortran) to parse and evaluate symbolic expressions input as text. It supports expressions in any number of variables of arbitrary names, decimal diff --git a/sci-libs/libmaus/metadata.xml b/sci-libs/libmaus/metadata.xml index 417405dfb..9d59bbcf4 100644 --- a/sci-libs/libmaus/metadata.xml +++ b/sci-libs/libmaus/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> libmaus is a collection of data structures and algorithms. It contains I/O classes (single byte and UTF-8) @@ -14,7 +14,7 @@ I/O classes (single byte and UTF-8) BAM sequence alignment files input/output (simple and collating) and many lower level support classes. </longdescription> - <upstream> - <remote-id type="github">gt1/libmaus</remote-id> - </upstream> + <upstream> + <remote-id type="github">gt1/libmaus</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/libmaus2/metadata.xml b/sci-libs/libmaus2/metadata.xml index daa058d7d..9d59bbcf4 100644 --- a/sci-libs/libmaus2/metadata.xml +++ b/sci-libs/libmaus2/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <longdescription lang="en"> libmaus is a collection of data structures and algorithms. It contains I/O classes (single byte and UTF-8) @@ -14,7 +14,7 @@ I/O classes (single byte and UTF-8) BAM sequence alignment files input/output (simple and collating) and many lower level support classes. </longdescription> - <upstream> - <remote-id type="github">gt1/libmaus</remote-id> - </upstream> + <upstream> + <remote-id type="github">gt1/libmaus</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/libmed/metadata.xml b/sci-libs/libmed/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-libs/libmed/metadata.xml +++ b/sci-libs/libmed/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/libspatialindex/metadata.xml b/sci-libs/libspatialindex/metadata.xml index 472a5c8ce..c874fefce 100644 --- a/sci-libs/libspatialindex/metadata.xml +++ b/sci-libs/libspatialindex/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>hasufell@posteo.de</email> - <name>Julian Ospald</name> - </maintainer> -<maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> + <maintainer type="person"> + <email>hasufell@posteo.de</email> + <name>Julian Ospald</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/libsufr/metadata.xml b/sci-libs/libsufr/metadata.xml index 77b842c6e..784cc759a 100644 --- a/sci-libs/libsufr/metadata.xml +++ b/sci-libs/libsufr/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>AstroFloyd@gmail.com</email> - <name>AstroFloyd</name> - </maintainer> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">libsufr</remote-id> - </upstream> + <maintainer type="person"> + <email>AstroFloyd@gmail.com</email> + <name>AstroFloyd</name> + </maintainer> + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">libsufr</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/libxc/metadata.xml b/sci-libs/libxc/metadata.xml index b66714541..47108ab63 100644 --- a/sci-libs/libxc/metadata.xml +++ b/sci-libs/libxc/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <maintainer type="person"> - <email>Hloupy.Honza@centrum.cz</email> - <name>Honza Macháček</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <maintainer type="person"> + <email>Hloupy.Honza@centrum.cz</email> + <name>Honza Macháček</name> + </maintainer> + <longdescription lang="en"> Libxc is a library of exchange-correlation functionals for density-functional theory. The aim is to provide a portable, well tested and reliable set of exchange and correlation functionals that can be used by all the ETSF codes and also other codes. @@ -25,7 +25,7 @@ Libxc is written in C and has Fortran bindings. It is released under the LGPL license (v. 3.0). Contributions are welcome. </longdescription> - <upstream> - <doc>http://octopus-code.org/wiki/Libxc:manual</doc> - </upstream> + <upstream> + <doc>http://octopus-code.org/wiki/Libxc:manual</doc> + </upstream> </pkgmetadata> diff --git a/sci-libs/lmfit/metadata.xml b/sci-libs/lmfit/metadata.xml index a4573ac05..2550df822 100644 --- a/sci-libs/lmfit/metadata.xml +++ b/sci-libs/lmfit/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">lmfit</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">lmfit</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/lwpr/metadata.xml b/sci-libs/lwpr/metadata.xml index 3ddf78275..4df4d2c06 100644 --- a/sci-libs/lwpr/metadata.xml +++ b/sci-libs/lwpr/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> Locally Weighted Projection Regression (LWPR) is a recent algorithm that achieves nonlinear function approximation in high dimensional spaces with redundant and irrelevant input dimensions. At its core, it uses @@ -14,10 +14,10 @@ weighted variant of Partial Least Squares (PLS) is employed for doing the dimensionality reduction. </longdescription> - <use> - <flag name="octave">Add <pkg>sci-mathematics/octave</pkg> support</flag> - </use> - <upstream> - <remote-id type="sourceforge">lwpr</remote-id> - </upstream> + <use> + <flag name="octave">Add <pkg>sci-mathematics/octave</pkg> support</flag> + </use> + <upstream> + <remote-id type="sourceforge">lwpr</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/matc/metadata.xml b/sci-libs/matc/metadata.xml index 9a3b4d3ec..70c9ebc20 100644 --- a/sci-libs/matc/metadata.xml +++ b/sci-libs/matc/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">ElmerCSC/elmerfem</remote-id> - <remote-id type="sourceforge">svn</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">ElmerCSC/elmerfem</remote-id> + <remote-id type="sourceforge">svn</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/med/metadata.xml b/sci-libs/med/metadata.xml index 0c6991d79..ae9640ffb 100644 --- a/sci-libs/med/metadata.xml +++ b/sci-libs/med/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/mkl/metadata.xml b/sci-libs/mkl/metadata.xml index 318c9616a..9badfacb9 100644 --- a/sci-libs/mkl/metadata.xml +++ b/sci-libs/mkl/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The Intel(R) Math Kernel Library is a mathematical library mostly optimized for Intel processors (also works on AMDs). It contains BLAS and LAPACK implementations, Fast Fourier Transforms, a vector math @@ -13,8 +13,8 @@ capacities. The package is installed as binary and has a restrictive license. Please see license terms and home page for proper use. </longdescription> - <use> - <flag name="int64">Build the 64 bits integer library</flag> - <flag name="mic">Install the libraries needed for supporting Intel Many Integrated Core (Xeon Phi)</flag> - </use> + <use> + <flag name="int64">Build the 64 bits integer library</flag> + <flag name="mic">Install the libraries needed for supporting Intel Many Integrated Core (Xeon Phi)</flag> + </use> </pkgmetadata> diff --git a/sci-libs/mlpack/metadata.xml b/sci-libs/mlpack/metadata.xml index 6a7ec9555..840f51833 100644 --- a/sci-libs/mlpack/metadata.xml +++ b/sci-libs/mlpack/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> mlpack is a C++ machine learning library with emphasis on scalability, speed, and ease-of-use. Its aim is to make machine learning possible for novice users by means of a simple, consistent diff --git a/sci-libs/modglue/metadata.xml b/sci-libs/modglue/metadata.xml index 277130405..bb455de54 100644 --- a/sci-libs/modglue/metadata.xml +++ b/sci-libs/modglue/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> The libModglue library is a C++ library with classes for forking external processes and asynchronous reading from streams. It takes away the burden of all subtleties involving the Unix fork call. The asynchronous read facility enables diff --git a/sci-libs/mpiblacs/metadata.xml b/sci-libs/mpiblacs/metadata.xml index 70527ac9a..14216ad4a 100644 --- a/sci-libs/mpiblacs/metadata.xml +++ b/sci-libs/mpiblacs/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The BLACS (Basic Linear Algebra Communication Subprograms) project is an ongoing investigation whose purpose is to create a linear algebra oriented message passing interface diff --git a/sci-libs/msms/metadata.xml b/sci-libs/msms/metadata.xml index 8937bad0b..da36ecbfc 100644 --- a/sci-libs/msms/metadata.xml +++ b/sci-libs/msms/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-libs/nexus/metadata.xml b/sci-libs/nexus/metadata.xml index 901161d45..f2e2cd6fb 100644 --- a/sci-libs/nexus/metadata.xml +++ b/sci-libs/nexus/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-libs/ni-visa/metadata.xml b/sci-libs/ni-visa/metadata.xml index d7298d70a..90bb64f30 100644 --- a/sci-libs/ni-visa/metadata.xml +++ b/sci-libs/ni-visa/metadata.xml @@ -1,7 +1,7 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mail@akhuettel.de</email> - </maintainer> + <maintainer type="person"> + <email>mail@akhuettel.de</email> + </maintainer> </pkgmetadata> diff --git a/sci-libs/nibabel/metadata.xml b/sci-libs/nibabel/metadata.xml index f2e7dfe11..f2109b11e 100644 --- a/sci-libs/nibabel/metadata.xml +++ b/sci-libs/nibabel/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-libs/nipy-data/metadata.xml b/sci-libs/nipy-data/metadata.xml index b4faeac37..6ae9754dc 100644 --- a/sci-libs/nipy-data/metadata.xml +++ b/sci-libs/nipy-data/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Nipy-data is a package containing data files needed for many nipy demo tutorials. </longdescription> </pkgmetadata> diff --git a/sci-libs/nipy-templates/metadata.xml b/sci-libs/nipy-templates/metadata.xml index 9fb654ab3..5299e273f 100644 --- a/sci-libs/nipy-templates/metadata.xml +++ b/sci-libs/nipy-templates/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Nipy-templates is a package containing template files needed by some nipy functions. </longdescription> </pkgmetadata> diff --git a/sci-libs/nipy/metadata.xml b/sci-libs/nipy/metadata.xml index 16398ad90..e46b0c9ed 100644 --- a/sci-libs/nipy/metadata.xml +++ b/sci-libs/nipy/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-libs/nipype/metadata.xml b/sci-libs/nipype/metadata.xml index f63021cf6..7b0bf8a4f 100644 --- a/sci-libs/nipype/metadata.xml +++ b/sci-libs/nipype/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>horea.christ@gmail.com</email> - <name>Horea Christian</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>horea.christ@gmail.com</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Nipype, an open-source, community-developed initiative under the umbrella of NiPy, is a Python project that provides a uniform interface to existing neuroimaging software and facilitates interaction between @@ -21,8 +21,8 @@ creating a collaborative platform for neuroimaging software development in a high-level language and addressing limitations of existing pipeline systems. </longdescription> - <upstream> - <remote-id type="github">nipy/nipype</remote-id> - <remote-id type="sourceforge">nipy</remote-id> - </upstream> + <upstream> + <remote-id type="github">nipy/nipype</remote-id> + <remote-id type="sourceforge">nipy</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/o2scl/metadata.xml b/sci-libs/o2scl/metadata.xml index a4a37b48d..4c7cd686b 100644 --- a/sci-libs/o2scl/metadata.xml +++ b/sci-libs/o2scl/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> O2scl is a C++ class library for object-oriented numerical programming. It includes classes based on numerical routines from GSL and CERNLIB and two sub-libraries: thermodynamics of ideal and nearly-ideal particles with quantum statistics and e quations of state for finite density relevant for neutron stars. </longdescription> - <upstream> - <remote-id type="sourceforge">o2scl</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">o2scl</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/oasa/metadata.xml b/sci-libs/oasa/metadata.xml index 9b5c5b314..e66cf80b9 100644 --- a/sci-libs/oasa/metadata.xml +++ b/sci-libs/oasa/metadata.xml @@ -1,14 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> OASA is a python library for manipulation of chemical formats that forms the base of BKChem. It is in separate package, because there are other programs using it (e.g. Pybel in <pkg>sci-chemistry/openbabel-python</pkg>). </longdescription> - <use> - <flag name="cairo">Add support for Cairo graphics library using <pkg>dev-python/pycairo</pkg></flag> - </use> + <use> + <flag name="cairo">Add support for Cairo graphics library using <pkg>dev-python/pycairo</pkg></flag> + </use> </pkgmetadata> diff --git a/sci-libs/openblas/metadata.xml b/sci-libs/openblas/metadata.xml index 2bf0b4229..df5bfcc92 100644 --- a/sci-libs/openblas/metadata.xml +++ b/sci-libs/openblas/metadata.xml @@ -1,19 +1,19 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version. See <pkg>sci-libs/gotoblas2</pkg> for more on GotoBLAS2. </longdescription> - <use> - <flag name="int64">Build the 64 bits integer library</flag> - <flag name="dynamic">Build dynamic architecture detection at run time (for multi targets)</flag> - </use> - <upstream> - <remote-id type="github">xianyi/OpenBLAS</remote-id> - </upstream> + <use> + <flag name="int64">Build the 64 bits integer library</flag> + <flag name="dynamic">Build dynamic architecture detection at run time (for multi targets)</flag> + </use> + <upstream> + <remote-id type="github">xianyi/OpenBLAS</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/openlibm/metadata.xml b/sci-libs/openlibm/metadata.xml index d8ec828a7..eee1adbcf 100644 --- a/sci-libs/openlibm/metadata.xml +++ b/sci-libs/openlibm/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> OpenLibm is an effort to have a high quality, portable, standalone C mathematical library (libm). It can be used standalone in applications and programming language implementations. diff --git a/sci-libs/optpp/metadata.xml b/sci-libs/optpp/metadata.xml index 2ff39ddcb..d7fee3da5 100644 --- a/sci-libs/optpp/metadata.xml +++ b/sci-libs/optpp/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> OPT++ is a library of nonlinear optimization algorithms written in C++. The motivation for this package is to build an environment for the rapid prototyping and development of new optimization diff --git a/sci-libs/pagmo/metadata.xml b/sci-libs/pagmo/metadata.xml index 061ee5e8a..cc59fd48c 100644 --- a/sci-libs/pagmo/metadata.xml +++ b/sci-libs/pagmo/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <use> - <flag name="nlopt">Use nlopt, a non-linear optimization library</flag> - <flag name="ipopt">Use ipopt, a interior-point optimizer</flag> - <flag name="eigen">Use eigen, a c++ linear algebra library, for algorithms like CAMES</flag> - </use> - <upstream> - <remote-id type="github">esa/pagmo2</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-astronomy@gentoo.org</email> + <name>Gentoo Astronomy Project</name> + </maintainer> + <use> + <flag name="nlopt">Use nlopt, a non-linear optimization library</flag> + <flag name="ipopt">Use ipopt, a interior-point optimizer</flag> + <flag name="eigen">Use eigen, a c++ linear algebra library, for algorithms like CAMES</flag> + </use> + <upstream> + <remote-id type="github">esa/pagmo2</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/parmetis/metadata.xml b/sci-libs/parmetis/metadata.xml index 885973259..275a99b1a 100644 --- a/sci-libs/parmetis/metadata.xml +++ b/sci-libs/parmetis/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> ParMETIS is an MPI-based parallel library that implements a variety of algorithms for partitioning unstructured graphs and for computing fill-reducing orderings of sparse matrices. ParMETIS extends the @@ -13,8 +13,8 @@ especially suited for parallel AMR computations and large scale numerical simulations. </longdescription> -<use> - <flag name="int64">Build the 64 bits integer library (needed for > 2^31 vertices)</flag> - <flag name="double-precision">Floating-point operation done as double precision</flag> -</use> + <use> + <flag name="int64">Build the 64 bits integer library (needed for > 2^31 vertices)</flag> + <flag name="double-precision">Floating-point operation done as double precision</flag> + </use> </pkgmetadata> diff --git a/sci-libs/pg2plplot/metadata.xml b/sci-libs/pg2plplot/metadata.xml index 30b426c5c..21ca1a06f 100644 --- a/sci-libs/pg2plplot/metadata.xml +++ b/sci-libs/pg2plplot/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>AstroFloyd@gmail.com</email> - <name>AstroFloyd</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>AstroFloyd@gmail.com</email> + <name>AstroFloyd</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> PG2PLplot is code intended to help the transition from Fortran code linked against PGPlot to linking it against PLplot. </longdescription> - <upstream> - <remote-id type="sourceforge">pg2plplot</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">pg2plplot</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/plasma/metadata.xml b/sci-libs/plasma/metadata.xml index 26d10d072..d3f811d7a 100644 --- a/sci-libs/plasma/metadata.xml +++ b/sci-libs/plasma/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The Parallel Linear Algebra for Scalable Multi-core Architectures (PLASMA) project aims to address the critical and highly disruptive situation that is facing the Linear Algebra and High Performance diff --git a/sci-libs/pmx/metadata.xml b/sci-libs/pmx/metadata.xml index cb2e5209a..0d6036925 100644 --- a/sci-libs/pmx/metadata.xml +++ b/sci-libs/pmx/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <longdescription> pmx (formerly pymacs) has started as a small bunch of classes to read structure files such as pdb or gro and trajectory data in gromacs xtc format. Over the years it has been extended towards a versatile (bio-) @@ -13,7 +13,7 @@ functionalities, e.g. gromacs file parsers and scripts for setup and analysis of free energy calculations. </longdescription> - <upstream> - <remote-id type="github">dseeliger/pmx</remote-id> - </upstream> + <upstream> + <remote-id type="github">dseeliger/pmx</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/pydicom/metadata.xml b/sci-libs/pydicom/metadata.xml index b38f42e10..490c556c1 100644 --- a/sci-libs/pydicom/metadata.xml +++ b/sci-libs/pydicom/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="pypi">pydicom</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="pypi">pydicom</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/rdkit/metadata.xml b/sci-libs/rdkit/metadata.xml index 92af8f7f1..be6cc7780 100644 --- a/sci-libs/rdkit/metadata.xml +++ b/sci-libs/rdkit/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>sci-chemistry@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <upstream> - <remote-id type="github">rdkit/rdkit</remote-id> - </upstream> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>sci-chemistry@gentoo.org</email> + <name>Gentoo Chemistry Project</name> + </maintainer> + <upstream> + <remote-id type="github">rdkit/rdkit</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/scalapack/metadata.xml b/sci-libs/scalapack/metadata.xml index b538e0aef..4a08991eb 100644 --- a/sci-libs/scalapack/metadata.xml +++ b/sci-libs/scalapack/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines redesigned for distributed memory MIMD parallel computers. It is currently written in a Single-Program-Multiple-Data style using explicit message diff --git a/sci-libs/scikits_image/metadata.xml b/sci-libs/scikits_image/metadata.xml index f88372407..b5a24daa6 100644 --- a/sci-libs/scikits_image/metadata.xml +++ b/sci-libs/scikits_image/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> This SciKit (toolkit for SciPy) includes useful image processing algorithms for use with Python and NumPy. While SciPy’s ndimage provides low-level manipulation, scikits.image centres around algorithms and applications. </longdescription> - <use> - <flag name="freeimage">Enable support for image i/o via + <use> + <flag name="freeimage">Enable support for image i/o via <pkg>media-libs/freeimage</pkg></flag> - <flag name="pyamg">Enable support for algebraic solvers via <pkg>dev-python/pyamg</pkg></flag> - </use> + <flag name="pyamg">Enable support for algebraic solvers via <pkg>dev-python/pyamg</pkg></flag> + </use> </pkgmetadata> diff --git a/sci-libs/shtools/metadata.xml b/sci-libs/shtools/metadata.xml index 518b8e2dd..fe09def6d 100644 --- a/sci-libs/shtools/metadata.xml +++ b/sci-libs/shtools/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>heroxbd@gentoo.org</email> - <name>Benda Xu</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>heroxbd@gentoo.org</email> + <name>Benda Xu</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> SHTOOLS is an archive of Fortran 95 and Python software that can be used to perform spherical harmonic transforms and reconstructions, rotations of data expressed in spherical harmonics, and multitaper spectral analyses on the sphere. </longdescription> - <upstream> - <remote-id type="github">SHTOOLS/SHTOOLS</remote-id> - </upstream> + <upstream> + <remote-id type="github">SHTOOLS/SHTOOLS</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/spglib/metadata.xml b/sci-libs/spglib/metadata.xml index a37ff6fea..1d0e56bb3 100644 --- a/sci-libs/spglib/metadata.xml +++ b/sci-libs/spglib/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-libs/starparse/metadata.xml b/sci-libs/starparse/metadata.xml index 1aad99e72..68b22fce4 100644 --- a/sci-libs/starparse/metadata.xml +++ b/sci-libs/starparse/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">burrow-owl</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">burrow-owl</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/superlu_dist/metadata.xml b/sci-libs/superlu_dist/metadata.xml index e9f034857..dd5a7bdc6 100644 --- a/sci-libs/superlu_dist/metadata.xml +++ b/sci-libs/superlu_dist/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> SuperLU is a general purpose library for the direct solution of large, sparse, nonsymmetric systems of linear equations on high performance machines. The library is written in C and is callable diff --git a/sci-libs/symengine/metadata.xml b/sci-libs/symengine/metadata.xml index 59ecfed71..5f5840260 100644 --- a/sci-libs/symengine/metadata.xml +++ b/sci-libs/symengine/metadata.xml @@ -1,18 +1,18 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>mschu.dev@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <upstream> - <remote-id type="github">sympy/symengine</remote-id> - </upstream> - <use> - <flag name="boost">Add support for boost (<pkg>dev-libs/boost</pkg>)</flag> - </use> + <maintainer type="person"> + <email>mschu.dev@gmail.com</email> + <name>Michael Schubert</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <upstream> + <remote-id type="github">sympy/symengine</remote-id> + </upstream> + <use> + <flag name="boost">Add support for boost (<pkg>dev-libs/boost</pkg>)</flag> + </use> </pkgmetadata> diff --git a/sci-libs/tmglib/metadata.xml b/sci-libs/tmglib/metadata.xml index 75d668a2b..835152b3b 100644 --- a/sci-libs/tmglib/metadata.xml +++ b/sci-libs/tmglib/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> This is a library to generate matrices to test LAPACK implementations. </longdescription> diff --git a/sci-libs/vxl/metadata.xml b/sci-libs/vxl/metadata.xml index ddb4bcd85..eace5427d 100644 --- a/sci-libs/vxl/metadata.xml +++ b/sci-libs/vxl/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> VXL (the Vision-something-Libraries) is a collection of C++ libraries designed for computer vision research and implementation. It was created from TargetJr and the IUE with the aim of making a light, fast and consistent system. VXL is written in ANSI/ISO C++ and is designed to be portable over many platforms. </longdescription> - <upstream> - <remote-id type="sourceforge">vxl</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">vxl</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/wannier90/metadata.xml b/sci-libs/wannier90/metadata.xml index ad1510a0c..28beafa4a 100644 --- a/sci-libs/wannier90/metadata.xml +++ b/sci-libs/wannier90/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/sci-libs/xblas/metadata.xml b/sci-libs/xblas/metadata.xml index 99b5eff1d..68c2d3b8e 100644 --- a/sci-libs/xblas/metadata.xml +++ b/sci-libs/xblas/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The XBLAS library of routines is part of a reference implementation for the Dense and Banded Basic Linear Algebra Subroutines, along with their Extended and Mixed Precision versions, as documented in Chapters 2 and 4 of the new BLAS Standard. </longdescription> - <use> - <flag name="int64">Build the 64 bits integer library</flag> - </use> + <use> + <flag name="int64">Build the 64 bits integer library</flag> + </use> </pkgmetadata> diff --git a/sci-libs/xraylib/metadata.xml b/sci-libs/xraylib/metadata.xml index afbaa48db..c3dc48c2f 100644 --- a/sci-libs/xraylib/metadata.xml +++ b/sci-libs/xraylib/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>cjk34@cam.ac.uk</email> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>cjk34@cam.ac.uk</email> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Quantitative estimate of elemental composition by spectroscopic and imaging techniques using X-ray fluorescence requires the availability of accurate data of X-ray interaction with matter. Although a wide number of computer codes @@ -36,9 +36,9 @@ interactions. Recent developments", Spectrochimica Acta B 66 (2011) 776-784 ( doi: http://dx.doi.org/10.1016/j.sab.2011.09.011 ) </longdescription> - <use> + <use> </use> - <upstream> - <remote-id type="github">tschoonj/xraylib</remote-id> - </upstream> + <upstream> + <remote-id type="github">tschoonj/xraylib</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-libs/zarja/metadata.xml b/sci-libs/zarja/metadata.xml index 65abbc3a1..ef8915f36 100644 --- a/sci-libs/zarja/metadata.xml +++ b/sci-libs/zarja/metadata.xml @@ -1,16 +1,16 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Zarja is open-source library that allows to make multi-agent simulations on graphs. Its functionality was proved in Classical or Quantum mechanical models. </longdescription> - <upstream> - <remote-id type="sourceforge">zarja</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">zarja</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/Macaulay2/metadata.xml b/sci-mathematics/Macaulay2/metadata.xml index c92d667cb..a19ac4ea6 100644 --- a/sci-mathematics/Macaulay2/metadata.xml +++ b/sci-mathematics/Macaulay2/metadata.xml @@ -1,18 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tom111@gmx.de</email> - <name>Thomas Kahle</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <use> - <flag name="optimization">Disable to build with -O0 for debugging.</flag> - </use> - <longdescription lang="en"> + <maintainer type="person"> + <email>tom111@gmx.de</email> + <name>Thomas Kahle</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <use> + <flag name="optimization">Disable to build with -O0 for debugging.</flag> + </use> + <longdescription lang="en"> Macaulay2 is a research tool for algraic geometry and commutative algebra. </longdescription> diff --git a/sci-mathematics/Oid/metadata.xml b/sci-mathematics/Oid/metadata.xml index 11ac21047..1d93dd236 100644 --- a/sci-mathematics/Oid/metadata.xml +++ b/sci-mathematics/Oid/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tom111@gmx.de</email> - <name>Thomas Kahle</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tom111@gmx.de</email> + <name>Thomas Kahle</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> Oid is a tool to experiment with matroids </longdescription> </pkgmetadata> diff --git a/sci-mathematics/acl2/metadata.xml b/sci-mathematics/acl2/metadata.xml index efecc286f..e2db827ec 100644 --- a/sci-mathematics/acl2/metadata.xml +++ b/sci-mathematics/acl2/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-mathematics/alt-ergo/metadata.xml b/sci-mathematics/alt-ergo/metadata.xml index 8224139a5..b844eacad 100644 --- a/sci-mathematics/alt-ergo/metadata.xml +++ b/sci-mathematics/alt-ergo/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> Alt-Ergo is an open source automatic theorem prover dedicated to program verification. It is an SMT solver based on CC(X): a congruence closure algorithm parameterized by an equational theory X. Alt-Ergo is based on a home-made SAT-solver and implements an diff --git a/sci-mathematics/apron/metadata.xml b/sci-mathematics/apron/metadata.xml index f83f44091..d77f1f1fc 100644 --- a/sci-mathematics/apron/metadata.xml +++ b/sci-mathematics/apron/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> The APRON library is dedicated to the static analysis of the numerical variables of a program by Abstract Interpretation. The aim of such an analysis is to infer invariants about these variables. The APRON library diff --git a/sci-mathematics/axel-vtkview/metadata.xml b/sci-mathematics/axel-vtkview/metadata.xml index ec9fa9d47..c38916f51 100644 --- a/sci-mathematics/axel-vtkview/metadata.xml +++ b/sci-mathematics/axel-vtkview/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-mathematics/axel/metadata.xml b/sci-mathematics/axel/metadata.xml index ec9fa9d47..c38916f51 100644 --- a/sci-mathematics/axel/metadata.xml +++ b/sci-mathematics/axel/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-mathematics/axiom/metadata.xml b/sci-mathematics/axiom/metadata.xml index d17eda6d5..514f7304d 100644 --- a/sci-mathematics/axiom/metadata.xml +++ b/sci-mathematics/axiom/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-mathematics/burrtools/metadata.xml b/sci-mathematics/burrtools/metadata.xml index 12aa01e21..aeaa6502a 100644 --- a/sci-mathematics/burrtools/metadata.xml +++ b/sci-mathematics/burrtools/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> This (set of) program(s) will help you solve a certain kind of puzzle. Namely puzzles that are made out of square or dice shaped units, spheres or prisms with an equilateral triangle as base and where the pieces are also aligned along those grids in the solutions. </longdescription> - <upstream> - <remote-id type="sourceforge">burrtools</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">burrtools</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/cadabra/metadata.xml b/sci-mathematics/cadabra/metadata.xml index b9793643c..0cc2fca48 100644 --- a/sci-mathematics/cadabra/metadata.xml +++ b/sci-mathematics/cadabra/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription>Cadabra is a computer algebra system (CAS) designed specifically for the solution of problems encountered in field theory. It has extensive functionality for tensor computer algebra, tensor polynomial simplification including multi-term symmetries, fermions and anti-commuting variables, Clifford algebras and Fierz transformations, implicit coordinate dependence, multiple index types and many more.</longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription>Cadabra is a computer algebra system (CAS) designed specifically for the solution of problems encountered in field theory. It has extensive functionality for tensor computer algebra, tensor polynomial simplification including multi-term symmetries, fermions and anti-commuting variables, Clifford algebras and Fierz transformations, implicit coordinate dependence, multiple index types and many more.</longdescription> </pkgmetadata> diff --git a/sci-mathematics/cipi/metadata.xml b/sci-mathematics/cipi/metadata.xml index 1d7b2e537..ac95ce972 100644 --- a/sci-mathematics/cipi/metadata.xml +++ b/sci-mathematics/cipi/metadata.xml @@ -1,19 +1,19 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tom111@gmx.de</email> - <name>Thomas Kahle</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tom111@gmx.de</email> + <name>Thomas Kahle</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> cipi is a threaded implementation of iterative proportional fitting. It is used to compute information projections iteratively. </longdescription> - <upstream> - <remote-id type="github">tom111/cipi</remote-id> - </upstream> + <upstream> + <remote-id type="github">tom111/cipi</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/dolfin/metadata.xml b/sci-mathematics/dolfin/metadata.xml index 48b4594a3..f35a5e9a9 100644 --- a/sci-mathematics/dolfin/metadata.xml +++ b/sci-mathematics/dolfin/metadata.xml @@ -1,26 +1,26 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> DOLFIN is the C++/Python interface of FEniCS, providing a consistent PSE (Problem Solving Environment) for ordinary and partial differential equations. </longdescription> - <use> - <flag name="cgal">Adds support for geometric algorithms with <pkg>sci-mathematics/cgal</pkg></flag> - <flag name="cholmod">Adds support for sparse Cholesky factorization with <pkg>sci-libs/cholmod</pkg></flag> - <flag name="hdf5">Adds support for <pkg>sci-libs/hdf5</pkg></flag> - <flag name="parmetis">Adds support for parallel graph partitioning with <pkg>sci-libs/parmetis</pkg></flag> - <flag name="petsc">Adds support for numerical linear algebra toolkit <pkg>sci-mathematics/petsc</pkg></flag> - <flag name="scotch">Adds support for graph partitioning with <pkg>sci-libs/scotch</pkg></flag> - <flag name="trilinos">Adds support for numerical linear algebra toolkit <pkg>sci-libs/trilinos</pkg></flag> - <flag name="umfpack">Adds support for sparse solving with <pkg>sci-libs/umfpack</pkg></flag> - <flag name="vtk">Adds support for the visualization toolkit <pkg>sci-libs/vtk</pkg></flag> - </use> - <upstream> - <remote-id type="bitbucket">fenics-project/dolfin</remote-id> - <remote-id type="launchpad">dolfin</remote-id> - </upstream> + <use> + <flag name="cgal">Adds support for geometric algorithms with <pkg>sci-mathematics/cgal</pkg></flag> + <flag name="cholmod">Adds support for sparse Cholesky factorization with <pkg>sci-libs/cholmod</pkg></flag> + <flag name="hdf5">Adds support for <pkg>sci-libs/hdf5</pkg></flag> + <flag name="parmetis">Adds support for parallel graph partitioning with <pkg>sci-libs/parmetis</pkg></flag> + <flag name="petsc">Adds support for numerical linear algebra toolkit <pkg>sci-mathematics/petsc</pkg></flag> + <flag name="scotch">Adds support for graph partitioning with <pkg>sci-libs/scotch</pkg></flag> + <flag name="trilinos">Adds support for numerical linear algebra toolkit <pkg>sci-libs/trilinos</pkg></flag> + <flag name="umfpack">Adds support for sparse solving with <pkg>sci-libs/umfpack</pkg></flag> + <flag name="vtk">Adds support for the visualization toolkit <pkg>sci-libs/vtk</pkg></flag> + </use> + <upstream> + <remote-id type="bitbucket">fenics-project/dolfin</remote-id> + <remote-id type="launchpad">dolfin</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/dsfmt/metadata.xml b/sci-mathematics/dsfmt/metadata.xml index 4f1226e40..f1ed0ae83 100644 --- a/sci-mathematics/dsfmt/metadata.xml +++ b/sci-mathematics/dsfmt/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> The purpose of Double precision SIMD-oriented Fast Mersenne Twister (dSFMT) is to speed up the generation by avoiding the expensive conversion of integer to double (floating point). dSFMT directly generates diff --git a/sci-mathematics/flocq/metadata.xml b/sci-mathematics/flocq/metadata.xml index 3ee13d235..741e7a96c 100644 --- a/sci-mathematics/flocq/metadata.xml +++ b/sci-mathematics/flocq/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> -</maintainer> -<longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> Flocq (Floats for Coq) is a floating-point formalization for the Coq system. It provides a comprehensive library of theorems on a multi-radix multi-precision arithmetic. It also supports efficient numerical diff --git a/sci-mathematics/frama-c/metadata.xml b/sci-mathematics/frama-c/metadata.xml index 3fefb7811..7f2539fc0 100644 --- a/sci-mathematics/frama-c/metadata.xml +++ b/sci-mathematics/frama-c/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> Frama-C is a suite of tools dedicated to the analysis of the source code of software written in C. It gathers several static analysis techniques in a single collaborative framework. The collaborative approach of diff --git a/sci-mathematics/freefem++/metadata.xml b/sci-mathematics/freefem++/metadata.xml index b242c635b..7cbac49f7 100644 --- a/sci-mathematics/freefem++/metadata.xml +++ b/sci-mathematics/freefem++/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> FreeFem++ is an implementation of a language dedicated to the finite element method. It enables you to solve Partial Differential Equations (PDE) easily. diff --git a/sci-mathematics/gambit/metadata.xml b/sci-mathematics/gambit/metadata.xml index 14f19d7ee..e0ec892a5 100644 --- a/sci-mathematics/gambit/metadata.xml +++ b/sci-mathematics/gambit/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>dongxuli2011@gmail.com</email> - <name>Dongxu Li</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <use> - <flag name="X"> + <maintainer type="person"> + <email>dongxuli2011@gmail.com</email> + <name>Dongxu Li</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <use> + <flag name="X"> Enable gui support using wxWidgets. </flag> - </use> - <upstream> - <remote-id type="sourceforge">gambit</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="sourceforge">gambit</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/gap/metadata.xml b/sci-mathematics/gap/metadata.xml index 65be48d2e..7fa3c9717 100644 --- a/sci-mathematics/gap/metadata.xml +++ b/sci-mathematics/gap/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>A.G.Grozin@inp.nsk.su</email> - <name>Andrey Grozin</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>A.G.Grozin@inp.nsk.su</email> + <name>Andrey Grozin</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> Groups, Algorithms, Programming is a system for computational discrete algebra, with particular emphasis on Computational Group Theory. GAP provides a programming language, a library of thousands @@ -19,7 +19,7 @@ representations, rings, vector spaces, algebras, combinatorial structures, and more. </longdescription> - <use> - <flag name="xtom">Automatically generated description for xtom</flag> - </use> + <use> + <flag name="xtom">Automatically generated description for xtom</flag> + </use> </pkgmetadata> diff --git a/sci-mathematics/gappa/metadata.xml b/sci-mathematics/gappa/metadata.xml index 5d252260c..872d5ad20 100644 --- a/sci-mathematics/gappa/metadata.xml +++ b/sci-mathematics/gappa/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> Gappa is a tool intended to help verifying and formally proving properties on numerical programs dealing with floating-point or fixed-point arithmetic. It has been used to write robust floating-point diff --git a/sci-mathematics/gappalib-coq/metadata.xml b/sci-mathematics/gappalib-coq/metadata.xml index f71ba2afb..ba444cb94 100644 --- a/sci-mathematics/gappalib-coq/metadata.xml +++ b/sci-mathematics/gappalib-coq/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> -</maintainer> -<longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> While Gappa is intended to be used directly, it can also act as a backend prover for the Why software verification plateform or as an automatic tactic for the Coq proof assistant. diff --git a/sci-mathematics/giac/metadata.xml b/sci-mathematics/giac/metadata.xml index 38e823926..aa9b2646b 100644 --- a/sci-mathematics/giac/metadata.xml +++ b/sci-mathematics/giac/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> -</maintainer> -<longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> Giac is a free computer algebra system that can be used to perform computer algebra, function graphs, interactive geometry (2-d and 3-d), spreadsheet and statistics, programmation. It may be used as a replacement diff --git a/sci-mathematics/kash-bin/metadata.xml b/sci-mathematics/kash-bin/metadata.xml index 73bcc579d..fc53f2207 100644 --- a/sci-mathematics/kash-bin/metadata.xml +++ b/sci-mathematics/kash-bin/metadata.xml @@ -1,14 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tomka@gentoo.org</email> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>tomka@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> KANT is a computer algebra system for sophisticated computations in algebraic number fields that has been developed under the project leadership of Prof. Dr. M. E. Pohst at Technische Universität Berlin. diff --git a/sci-mathematics/kayali/metadata.xml b/sci-mathematics/kayali/metadata.xml index 334e81c07..def9a9d8c 100644 --- a/sci-mathematics/kayali/metadata.xml +++ b/sci-mathematics/kayali/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> kayali is a Qt based Computer Algebra System (CAS) that can also be used as an advanced replacement for KDE KCalc. It is essentially a front end GUI forMaxima (and is easily extended to other CAS back-ends) and Gnuplot. </longdescription> - <upstream> - <remote-id type="sourceforge">kayali</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">kayali</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/lattE-macchiato/metadata.xml b/sci-mathematics/lattE-macchiato/metadata.xml index 80f5588b7..f043b5060 100644 --- a/sci-mathematics/lattE-macchiato/metadata.xml +++ b/sci-mathematics/lattE-macchiato/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tom111@gmx.de</email> - <name>Thomas Kahle</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tom111@gmx.de</email> + <name>Thomas Kahle</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> Macaulay2 is a research tool for algraic geometry and commutative algebra. </longdescription> diff --git a/sci-mathematics/libsfmt/metadata.xml b/sci-mathematics/libsfmt/metadata.xml index d17eda6d5..514f7304d 100644 --- a/sci-mathematics/libsfmt/metadata.xml +++ b/sci-mathematics/libsfmt/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-mathematics/ltl2ba/metadata.xml b/sci-mathematics/ltl2ba/metadata.xml index 0c6991d79..ae9640ffb 100644 --- a/sci-mathematics/ltl2ba/metadata.xml +++ b/sci-mathematics/ltl2ba/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-mathematics/mathics/metadata.xml b/sci-mathematics/mathics/metadata.xml index d2e5a63b0..b578df1bf 100644 --- a/sci-mathematics/mathics/metadata.xml +++ b/sci-mathematics/mathics/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/sci-mathematics/mdp/metadata.xml b/sci-mathematics/mdp/metadata.xml index bca69383e..63bb3d1f1 100644 --- a/sci-mathematics/mdp/metadata.xml +++ b/sci-mathematics/mdp/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>tim@cerazone.net</email> - <name>Tim Cera</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>tim@cerazone.net</email> + <name>Tim Cera</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> Modular toolkit for Data Processing (MDP) is a Python data processing framework. Implemented algorithms include: Principal Component Analysis (PCA), Independent Component Analysis (ICA), Slow Feature Analysis (SFA), @@ -17,7 +17,7 @@ Analysis, Fisher Discriminant Analysis (FDA), Gaussian Classifiers, and Restricted Boltzmann Machines. </longdescription> - <upstream> - <remote-id type="sourceforge">mdp-toolkit</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">mdp-toolkit</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/netgen/metadata.xml b/sci-mathematics/netgen/metadata.xml index 78d0a170b..a2cd926a4 100644 --- a/sci-mathematics/netgen/metadata.xml +++ b/sci-mathematics/netgen/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <use> - <flag name="opencascade"> Enable OpenCASCADE support</flag> - </use> - <upstream> - <remote-id type="sourceforge">netgen-mesher</remote-id> - </upstream> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <use> + <flag name="opencascade"> Enable OpenCASCADE support</flag> + </use> + <upstream> + <remote-id type="sourceforge">netgen-mesher</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/open-axiom/metadata.xml b/sci-mathematics/open-axiom/metadata.xml index 130efc546..e1c513481 100644 --- a/sci-mathematics/open-axiom/metadata.xml +++ b/sci-mathematics/open-axiom/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> OpenAxiom is an open source platform for symbolic, algebraic, and numerical computations. It offers an interactive environment, an expressive programming language, a compiler, a large set of mathematical libraries of interest to researchers and practitioners of computational sciences. </longdescription> - <upstream> - <remote-id type="sourceforge">open-axiom</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">open-axiom</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/pff/metadata.xml b/sci-mathematics/pff/metadata.xml index 0d54bf6c4..15984c1cd 100644 --- a/sci-mathematics/pff/metadata.xml +++ b/sci-mathematics/pff/metadata.xml @@ -1,15 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> -</maintainer> -<longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> PFF (Preuves Formelles sur les Flottants = Formal Proofs about Floats) is a repository of a Coq library about floating-point arithmetic. It contains both definitions and proofs of basic facts, old and new properties and algorithms. </longdescription> - </pkgmetadata> diff --git a/sci-mathematics/pulp/metadata.xml b/sci-mathematics/pulp/metadata.xml index 83aff6f44..ce584d233 100644 --- a/sci-mathematics/pulp/metadata.xml +++ b/sci-mathematics/pulp/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="pypi">PuLP</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="pypi">PuLP</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/scilab/metadata.xml b/sci-mathematics/scilab/metadata.xml index 0d9212f42..da1c3fd2d 100644 --- a/sci-mathematics/scilab/metadata.xml +++ b/sci-mathematics/scilab/metadata.xml @@ -1,24 +1,24 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> Scilab is a matrix-based scientific software package. Scilab contains hundreds of built-in mathematical functions, rich data structures (including polynomials, rationals,linear systems, lists, etc...) and comes with a number of specific toolboxes for control, signal processing, ... </longdescription> - <use> - <flag name="gui">Build the Java base graphical interface</flag> - <flag name="umfpack">Adds support for sparse solving + <use> + <flag name="gui">Build the Java base graphical interface</flag> + <flag name="umfpack">Adds support for sparse solving with <pkg>sci-libs/umfpack</pkg></flag> - <flag name="matio">Enable support for MATLAB file through <pkg>sci-libs/matio</pkg></flag> - <flag name="xcos">Enable building hybrid dynamic systems modeler and + <flag name="matio">Enable support for MATLAB file through <pkg>sci-libs/matio</pkg></flag> + <flag name="xcos">Enable building hybrid dynamic systems modeler and simulator Xcos</flag> - <flag name="emf">Add suport for exporting to emf files</flag> - </use> + <flag name="emf">Add suport for exporting to emf files</flag> + </use> </pkgmetadata> diff --git a/sci-mathematics/tisean/metadata.xml b/sci-mathematics/tisean/metadata.xml index 04bcf9b8c..02d26ebf3 100644 --- a/sci-mathematics/tisean/metadata.xml +++ b/sci-mathematics/tisean/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - <name>Justin Lecher (jlec)</name> - </maintainer> - <upstream> - <remote-id type="github">heggus/Tisean</remote-id> - </upstream> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + <name>Justin Lecher (jlec)</name> + </maintainer> + <upstream> + <remote-id type="github">heggus/Tisean</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/ufc/metadata.xml b/sci-mathematics/ufc/metadata.xml index b3a913d46..9a93b9cc9 100644 --- a/sci-mathematics/ufc/metadata.xml +++ b/sci-mathematics/ufc/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> UFC (Unified Form-assembly Code) is a unified framework for finite element assembly. More precisely, it defines a fixed interface for communicating low level routines (functions) for evaluating and assembling finite element variational forms. The UFC interface consists of a single header file ufc.h that specifies a C++ interface that must be implemented by code that complies with the UFC specification. </longdescription> - <upstream> - <remote-id type="bitbucket">fenics-project/ufc-deprecated</remote-id> - <remote-id type="launchpad">ufc</remote-id> - </upstream> + <upstream> + <remote-id type="bitbucket">fenics-project/ufc-deprecated</remote-id> + <remote-id type="launchpad">ufc</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/why/metadata.xml b/sci-mathematics/why/metadata.xml index 8bf80c2f2..bc61eeae6 100644 --- a/sci-mathematics/why/metadata.xml +++ b/sci-mathematics/why/metadata.xml @@ -1,25 +1,25 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> -</maintainer> -<longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Why is a software verification platform. It contains a general-purpose verification condition generator (VCG) which is used as a back-end by other verification tools but it can also be used directly to verify programs. It also provides Krakatoa, a tool or the verification of Java programs and Caduceus, a tool for the verification of C programs. </longdescription> -<use> - <flag name="apron">Use <pkg>sci-mathematics/apron</pkg> library for + <use> + <flag name="apron">Use <pkg>sci-mathematics/apron</pkg> library for abstract interpretation</flag> - <flag name="coq">Add <pkg>sci-mathematics/coq</pkg> support</flag> - <flag name="float">Add <pkg>sci-mathematics/flocq</pkg> support</flag> - <flag name="gappa">Add <pkg>sci-mathematics/gappalib-coq</pkg> support</flag> - <flag name="frama-c">Add <pkg>sci-mathematics/frama-c</pkg> support</flag> - <flag name="pff">Add <pkg>sci-mathematics/pff</pkg> support</flag> - <flag name="why3">Add <pkg>sci-mathematics/why3</pkg> support</flag> -</use> + <flag name="coq">Add <pkg>sci-mathematics/coq</pkg> support</flag> + <flag name="float">Add <pkg>sci-mathematics/flocq</pkg> support</flag> + <flag name="gappa">Add <pkg>sci-mathematics/gappalib-coq</pkg> support</flag> + <flag name="frama-c">Add <pkg>sci-mathematics/frama-c</pkg> support</flag> + <flag name="pff">Add <pkg>sci-mathematics/pff</pkg> support</flag> + <flag name="why3">Add <pkg>sci-mathematics/why3</pkg> support</flag> + </use> </pkgmetadata> diff --git a/sci-mathematics/why3/metadata.xml b/sci-mathematics/why3/metadata.xml index 5b97cd19d..47cb67ef8 100644 --- a/sci-mathematics/why3/metadata.xml +++ b/sci-mathematics/why3/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> -</maintainer> -<longdescription> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription> Why3 is a platform for deductive program verification. It provides a rich language for specification and programming, called WhyML, and relies on external theorem provers, both automated and interactive, @@ -17,8 +17,8 @@ automated extraction mechanism. WhyML is also used as an intermediate language for the verification of C, Java, or Ada programs. </longdescription> -<use> - <flag name="float">Add <pkg>sci-mathematics/flocq</pkg> support</flag> - <flag name="frama-c">Enable Frama-C plugin</flag> -</use> + <use> + <flag name="float">Add <pkg>sci-mathematics/flocq</pkg> support</flag> + <flag name="frama-c">Enable Frama-C plugin</flag> + </use> </pkgmetadata> diff --git a/sci-mathematics/yorick/metadata.xml b/sci-mathematics/yorick/metadata.xml index 8c87d53b3..b1239e2c8 100644 --- a/sci-mathematics/yorick/metadata.xml +++ b/sci-mathematics/yorick/metadata.xml @@ -1,20 +1,20 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>A.G.Grozin@inp.nsk.su</email> - <name>Andrey Grozin</name> - </maintainer> - <maintainer type="project"> - <email>sci-mathematics@gentoo.org</email> - <name>Gentoo Mathematics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>A.G.Grozin@inp.nsk.su</email> + <name>Andrey Grozin</name> + </maintainer> + <maintainer type="project"> + <email>sci-mathematics@gentoo.org</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> Yorick is a language for scientific computing and rapid prototyping, similar to matlab. It can easily call C functions and libraries, has multidimensional arrays and built-in plot functions. </longdescription> - <upstream> - <remote-id type="sourceforge">yorick</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">yorick</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-mathematics/z3/metadata.xml b/sci-mathematics/z3/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-mathematics/z3/metadata.xml +++ b/sci-mathematics/z3/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-misc/elmer-elmergrid/metadata.xml b/sci-misc/elmer-elmergrid/metadata.xml index cab7f518f..070aa2029 100644 --- a/sci-misc/elmer-elmergrid/metadata.xml +++ b/sci-misc/elmer-elmergrid/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">svn</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">svn</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/elmer-fem/metadata.xml b/sci-misc/elmer-fem/metadata.xml index cab7f518f..070aa2029 100644 --- a/sci-misc/elmer-fem/metadata.xml +++ b/sci-misc/elmer-fem/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">svn</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">svn</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/elmer-front/metadata.xml b/sci-misc/elmer-front/metadata.xml index cab7f518f..070aa2029 100644 --- a/sci-misc/elmer-front/metadata.xml +++ b/sci-misc/elmer-front/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">svn</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">svn</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/elmer-gui/metadata.xml b/sci-misc/elmer-gui/metadata.xml index a0f2a3483..b704f5d8b 100644 --- a/sci-misc/elmer-gui/metadata.xml +++ b/sci-misc/elmer-gui/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <use> - <flag name="bundled_netgen"> Use bundled version of <pkg>sci-mathematics/netgen</pkg></flag> - <flag name="matc"> Enables <pkg>sci-libs/matc</pkg> support</flag> - <flag name="opencascade"> Enable <pkg>sci-libs/opencascade</pkg> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <use> + <flag name="bundled_netgen"> Use bundled version of <pkg>sci-mathematics/netgen</pkg></flag> + <flag name="matc"> Enables <pkg>sci-libs/matc</pkg> support</flag> + <flag name="opencascade"> Enable <pkg>sci-libs/opencascade</pkg> support</flag> - <flag name="qwt"> Enables <pkg>x11-libs/qwt</pkg> support</flag> - <flag name="vtk"> Enables <pkg>sci-libs/vtk</pkg> support</flag> - </use> + <flag name="qwt"> Enables <pkg>x11-libs/qwt</pkg> support</flag> + <flag name="vtk"> Enables <pkg>sci-libs/vtk</pkg> support</flag> + </use> </pkgmetadata> diff --git a/sci-misc/elmer-meshgen2d/metadata.xml b/sci-misc/elmer-meshgen2d/metadata.xml index cab7f518f..070aa2029 100644 --- a/sci-misc/elmer-meshgen2d/metadata.xml +++ b/sci-misc/elmer-meshgen2d/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">svn</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">svn</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/elmer-meta/metadata.xml b/sci-misc/elmer-meta/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/sci-misc/elmer-meta/metadata.xml +++ b/sci-misc/elmer-meta/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-misc/elmer-post/metadata.xml b/sci-misc/elmer-post/metadata.xml index cab7f518f..070aa2029 100644 --- a/sci-misc/elmer-post/metadata.xml +++ b/sci-misc/elmer-post/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="sourceforge">svn</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="sourceforge">svn</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/finomaton/metadata.xml b/sci-misc/finomaton/metadata.xml index 6bef80591..2d4fb61e6 100644 --- a/sci-misc/finomaton/metadata.xml +++ b/sci-misc/finomaton/metadata.xml @@ -1,7 +1,7 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> </pkgmetadata> diff --git a/sci-misc/foma/metadata.xml b/sci-misc/foma/metadata.xml index 6bef80591..2d4fb61e6 100644 --- a/sci-misc/foma/metadata.xml +++ b/sci-misc/foma/metadata.xml @@ -1,7 +1,7 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> </pkgmetadata> diff --git a/sci-misc/hfst/metadata.xml b/sci-misc/hfst/metadata.xml index ea7f0f8ea..4be3eac8d 100644 --- a/sci-misc/hfst/metadata.xml +++ b/sci-misc/hfst/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <longdescription lang="en"> diff --git a/sci-misc/irstlm/metadata.xml b/sci-misc/irstlm/metadata.xml index 39f066e5f..8e6fe0218 100644 --- a/sci-misc/irstlm/metadata.xml +++ b/sci-misc/irstlm/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-misc/jwnl/metadata.xml b/sci-misc/jwnl/metadata.xml index 252d8fec2..3979667fa 100644 --- a/sci-misc/jwnl/metadata.xml +++ b/sci-misc/jwnl/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> + <longdescription> Java based programming interface for accessing wordnet style dictionary data. </longdescription> - <upstream> - <remote-id type="sourceforge">jwordnet</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">jwordnet</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/kaldi/metadata.xml b/sci-misc/kaldi/metadata.xml index 277ec0c79..40ee7219c 100644 --- a/sci-misc/kaldi/metadata.xml +++ b/sci-misc/kaldi/metadata.xml @@ -1,24 +1,24 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>pavel.a.denisov@gmail.com</email> - <name>Pavel Denisov</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>pavel.a.denisov@gmail.com</email> + <name>Pavel Denisov</name> + </maintainer> + <longdescription lang="en"> Kaldi is a toolkit for speech recognition written in C++ and licensed under the Apache License v2.0. Kaldi is intended for use by speech recognition researchers. </longdescription> - <upstream> - <remote-id type="github">kaldi-asr/kaldi</remote-id> - </upstream> - <use> - <flag name="cuda"> + <upstream> + <remote-id type="github">kaldi-asr/kaldi</remote-id> + </upstream> + <use> + <flag name="cuda"> Build with CUDA support. </flag> - <flag name="double-precision"> + <flag name="double-precision"> Build in double precision mode. </flag> - </use> + </use> </pkgmetadata> diff --git a/sci-misc/kotus-sanalista/metadata.xml b/sci-misc/kotus-sanalista/metadata.xml index 13fb08d46..93547e56f 100644 --- a/sci-misc/kotus-sanalista/metadata.xml +++ b/sci-misc/kotus-sanalista/metadata.xml @@ -1,10 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> + <longdescription lang="en"> Kotus-sanalista is an XML list of Finnish words dictionary forms and morphological data. It was released by Research Institute of Languages in Finland. diff --git a/sci-misc/mitlm/metadata.xml b/sci-misc/mitlm/metadata.xml index 05123bc6e..92171c498 100644 --- a/sci-misc/mitlm/metadata.xml +++ b/sci-misc/mitlm/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>pavel.a.denisov@gmail.com</email> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>pavel.a.denisov@gmail.com</email> + </maintainer> + <longdescription lang="en"> The MIT Language Modeling (MITLM) toolkit is a set of tools designed for the efficient estimation of statistical n-gram language models involving iterative parameter estimation. It achieves much of its efficiency through the use of a compact vector representation of n-grams. </longdescription> - <upstream> - <remote-id type="github">mitlm/mitlm</remote-id> - </upstream> + <upstream> + <remote-id type="github">mitlm/mitlm</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/nltk/metadata.xml b/sci-misc/nltk/metadata.xml index d1266bc46..d0fd2f304 100644 --- a/sci-misc/nltk/metadata.xml +++ b/sci-misc/nltk/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> + <longdescription> NLTK is collection of natural language tools written in python language. It also contains huge corpora. </longdescription> - <upstream> - <remote-id type="github">nltk/nltk</remote-id> - </upstream> + <upstream> + <remote-id type="github">nltk/nltk</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/omorfi/metadata.xml b/sci-misc/omorfi/metadata.xml index bb7c08eda..3da95cce4 100644 --- a/sci-misc/omorfi/metadata.xml +++ b/sci-misc/omorfi/metadata.xml @@ -1,10 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> + <longdescription lang="en"> Omorfi is a free open source implementation of Finnish word form morphology. </longdescription> diff --git a/sci-misc/openfst/metadata.xml b/sci-misc/openfst/metadata.xml index 6bef80591..2d4fb61e6 100644 --- a/sci-misc/openfst/metadata.xml +++ b/sci-misc/openfst/metadata.xml @@ -1,7 +1,7 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> </pkgmetadata> diff --git a/sci-misc/opennlp-maxent/metadata.xml b/sci-misc/opennlp-maxent/metadata.xml index f27469ae0..cba0040bc 100644 --- a/sci-misc/opennlp-maxent/metadata.xml +++ b/sci-misc/opennlp-maxent/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> + <longdescription> Implementation of statistical classification using maximum entropy models in opennlp framework. </longdescription> - <upstream> - <remote-id type="sourceforge">maxent</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">maxent</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/praat/metadata.xml b/sci-misc/praat/metadata.xml index c65ab9204..3fa08f083 100644 --- a/sci-misc/praat/metadata.xml +++ b/sci-misc/praat/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> + <longdescription lang="en"> Praat is a phonetic program for computer. It includes speech synthesis, analysis and other tools. </longdescription> - <upstream> - <remote-id type="github">praat/praat</remote-id> - </upstream> + <upstream> + <remote-id type="github">praat/praat</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/pywordnet/metadata.xml b/sci-misc/pywordnet/metadata.xml index a9ae1397f..fb4aa683d 100644 --- a/sci-misc/pywordnet/metadata.xml +++ b/sci-misc/pywordnet/metadata.xml @@ -1,13 +1,13 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> + <longdescription> Pywordnet contains python bindings to handle wordnet databases. </longdescription> - <upstream> - <remote-id type="sourceforge">pywordnet</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">pywordnet</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/sfst/metadata.xml b/sci-misc/sfst/metadata.xml index 746d75b19..a94de54d8 100644 --- a/sci-misc/sfst/metadata.xml +++ b/sci-misc/sfst/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - <description>N.B. This is used in my master’s thesis project</description> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + <description>N.B. This is used in my master’s thesis project</description> + </maintainer> + <longdescription> SFST is open source package for compiling and using Finite State Transducers, mainly for linguistic uses, made in university of Stuttgart, Germany. diff --git a/sci-misc/simx/metadata.xml b/sci-misc/simx/metadata.xml index 321ce9b3c..b1adaa806 100644 --- a/sci-misc/simx/metadata.xml +++ b/sci-misc/simx/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">sim-x</remote-id> - </upstream> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">sim-x</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-misc/stanford-parser/metadata.xml b/sci-misc/stanford-parser/metadata.xml index c76e07957..ca7b6fd9d 100644 --- a/sci-misc/stanford-parser/metadata.xml +++ b/sci-misc/stanford-parser/metadata.xml @@ -1,10 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> + <longdescription> Stanford parser is a natural language parser implemented in Java and using statistical methods. It includes PCFG and dependency parsers. </longdescription> diff --git a/sci-misc/stanford-tagger/metadata.xml b/sci-misc/stanford-tagger/metadata.xml index 16c76b3ab..0f76cee76 100644 --- a/sci-misc/stanford-tagger/metadata.xml +++ b/sci-misc/stanford-tagger/metadata.xml @@ -1,10 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>flammie@gentoo.org</email> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>flammie@gentoo.org</email> + </maintainer> + <longdescription> University of Stanford’s Natural language pos tagger. Uses log linear pos taggers such as Maximum Entropy model tagging. </longdescription> diff --git a/sci-physics/abinit/metadata.xml b/sci-physics/abinit/metadata.xml index 06b80e82c..b1c414c7c 100644 --- a/sci-physics/abinit/metadata.xml +++ b/sci-physics/abinit/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> ABINIT is a package whose main program allows one to find the total energy, charge density and electronic structure of systems made of electrons and nuclei (molecules and periodic solids) within Density Functional Theory (DFT), using @@ -17,44 +17,44 @@ within the Time-Dependent Density Functional Theory (for molecules), or within Many-Body Perturbation Theory (the GW approximation). In addition to the main ABINIT code, different utility programs are provided. </longdescription> - <use> - <flag name="atompaw">Enable support for atompaw, a Projector Augmented Waves atomic data generator</flag> - <flag name="bigdft">Enable support for BigDFT, DFT package using wavelet basis set</flag> - <flag name="cuda">Enable support for nVidia CUDA</flag> - <flag name="cuda-double"> + <use> + <flag name="atompaw">Enable support for atompaw, a Projector Augmented Waves atomic data generator</flag> + <flag name="bigdft">Enable support for BigDFT, DFT package using wavelet basis set</flag> + <flag name="cuda">Enable support for nVidia CUDA</flag> + <flag name="cuda-double"> Enable support for double precision nVidia CUDA </flag> - <flag name="etsf_io"> + <flag name="etsf_io"> Enable support for reading and writing the European Theoretical Spectroscopy facility (ETSF) file format. </flag> - <flag name="fftw-threads"> + <flag name="fftw-threads"> Use the threaded (openMP or pthreads) version of <pkg>sci-libs/fftw</pkg> </flag> - <flag name="fftw-mpi"> + <flag name="fftw-mpi"> Use the MPI version of <pkg>sci-libs/fftw</pkg> (always with either openMP or pthreads too) </flag> - <flag name="fox">Enable support for FoX Fortran XML library</flag> - <flag name="levmar"> + <flag name="fox">Enable support for FoX Fortran XML library</flag> + <flag name="levmar"> Enable support for <pkg>sci-libs/levmar</pkg>, the Levenberg-Marquardt least-squares optimisation </flag> - <flag name="libabinit"> + <flag name="libabinit"> Build the libabinit used by <pkg>sci-libs/bigdft</pkg> (usage not tested yet, circular dependency not resolved) </flag> - <flag name="libxc">Enable support for libxc, an exchange-correlation potentials library</flag> - <flag name="lotf">Activate the Learn on The Fly method (LOTF) for Molecular Dynamics</flag> - <flag name="scalapack"> + <flag name="libxc">Enable support for libxc, an exchange-correlation potentials library</flag> + <flag name="lotf">Activate the Learn on The Fly method (LOTF) for Molecular Dynamics</flag> + <flag name="scalapack"> Use ScaLAPACK, a subset of LAPACK routines redesigned for heterogenous computing </flag> - <flag name="scripts">Install helper scripts, mostly Python</flag> - <flag name="vdwxc"> + <flag name="scripts">Install helper scripts, mostly Python</flag> + <flag name="vdwxc"> Activate van der Waals exchange-correlation correction. Since 7.4.0 no longer optional </flag> - <flag name="wannier"> + <flag name="wannier"> Enable support for wannier90, a maximally localized Wannier functions (MLWFs) calculator </flag> - </use> + </use> </pkgmetadata> diff --git a/sci-physics/bigdft/metadata.xml b/sci-physics/bigdft/metadata.xml index 17af4cae8..887c8828f 100644 --- a/sci-physics/bigdft/metadata.xml +++ b/sci-physics/bigdft/metadata.xml @@ -1,28 +1,28 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> BigDFT is a DFT massively parallel electronic structure code (GPL license) using a wavelet basis set. Wavelets form a real space basis set distributed on an adaptive mesh (two levels of resolution in our implementation). GTH or HGH pseudopotentials are used to remove the core electrons. Thanks to our Poisson solver based on a Green function formalism, periodic systems, surfaces and isolated systems can be simulated with the proper boundary conditions. </longdescription> - <use> - <flag name="cuda">Enable support for nVidia CUDA GPU acceleration</flag> - <flag name="etsf_io"> + <use> + <flag name="cuda">Enable support for nVidia CUDA GPU acceleration</flag> + <flag name="etsf_io"> Enable support for reading and writing the European Theoretical Spectroscopy facility (ETSF) file format. </flag> - <flag name="glib"> + <flag name="glib"> Compile with GLib Object System support </flag> - <flag name="opencl">Enable support for OpenCL GPU acceleration</flag> - <flag name="scalapack"> + <flag name="opencl">Enable support for OpenCL GPU acceleration</flag> + <flag name="scalapack"> Use ScaLAPACK, a subset of LAPACK routines redesigned for heterogenous computing </flag> - </use> - <upstream> - <remote-id type="launchpad">bigdft</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="launchpad">bigdft</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-physics/elk/metadata.xml b/sci-physics/elk/metadata.xml index 66d2fc12b..011bf8c83 100644 --- a/sci-physics/elk/metadata.xml +++ b/sci-physics/elk/metadata.xml @@ -1,25 +1,25 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> Elk is an all-electron full-potential linearised augmented-plane wave (FP-LAPW) code with many advanced features. Written originally at Karl-Franzens-Universität Graz as a milestone of the EXCITING EU Research and Training Network, the code is designed to be as simple as possible so that new developments in the field of density functional theory (DFT) can be added quickly and reliably. The code is freely available under the GNU General Public License. </longdescription> - <use> - <flag name="libxc"> + <use> + <flag name="libxc"> Use sci-libs/libxc library of exchange-correlation functionals by ETSF. </flag> - <flag name="perl"> + <flag name="perl"> Install perl scripts. </flag> - <flag name="python"> + <flag name="python"> Install python scripts. </flag> - </use> - <upstream> - <remote-id type="sourceforge">elk</remote-id> - </upstream> + </use> + <upstream> + <remote-id type="sourceforge">elk</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-physics/fullprof-bin/metadata.xml b/sci-physics/fullprof-bin/metadata.xml index 4cf6b3786..9cfa24f76 100644 --- a/sci-physics/fullprof-bin/metadata.xml +++ b/sci-physics/fullprof-bin/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marten@xtal.rwth-aachen.de</email> - <name>Jan M. Simons</name> - </maintainer> - <maintainer type="project"> - <email>sci-geosciences@gentoo.org</email> - <name>Gentoo Geosciences Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>marten@xtal.rwth-aachen.de</email> + <name>Jan M. Simons</name> + </maintainer> + <maintainer type="project"> + <email>sci-geosciences@gentoo.org</email> + <name>Gentoo Geosciences Project</name> + </maintainer> + <longdescription lang="en"> Fullprof is a programm suite of crystallographic programs (FullProf, WinPLOTR, EdPCR, GFourier, etc...) mainly developed for Rietveld analysis (structure profile refinement) of neutron (constant wavelength, time of flight, diff --git a/sci-physics/geant-vmc/metadata.xml b/sci-physics/geant-vmc/metadata.xml index 89ff88f7b..493072107 100644 --- a/sci-physics/geant-vmc/metadata.xml +++ b/sci-physics/geant-vmc/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> The Virtual Monte Carlo (VMC) allows to run different simulation Monte Carlo without changing the user code and therefore the input and output format as well as the geometry and detector response @@ -16,10 +16,10 @@ Geant3 VMC (C++) is provided within a single package together with GEANT3 (Fortran) - geant3. </longdescription> - <use> - <flag name="vgm">Enable the Virtual Geometry Model (<pkg>sci-physics/vgm</pkg>)</flag> - <flag name="g4root">Build G4Root (interface for GEANT4 simulation with a ROOT geometry)</flag> - <flag name="geant3">Build with Geant4 G3toG4 library</flag> - <flag name="mtroot">Build MTRoot (provides ROOT IO manager classes with multi-threading support)</flag> - </use> + <use> + <flag name="vgm">Enable the Virtual Geometry Model (<pkg>sci-physics/vgm</pkg>)</flag> + <flag name="g4root">Build G4Root (interface for GEANT4 simulation with a ROOT geometry)</flag> + <flag name="geant3">Build with Geant4 G3toG4 library</flag> + <flag name="mtroot">Build MTRoot (provides ROOT IO manager classes with multi-threading support)</flag> + </use> </pkgmetadata> diff --git a/sci-physics/genfit/metadata.xml b/sci-physics/genfit/metadata.xml index c302922f7..ca2316320 100644 --- a/sci-physics/genfit/metadata.xml +++ b/sci-physics/genfit/metadata.xml @@ -1,11 +1,11 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> GENFIT is an experiment-independent framework for track reconstruction for particle and nuclear physics. It consists of three modular components: - Track fitting algorithms @@ -31,7 +31,7 @@ FAIR, Darmstadt, Germany. It is also used in the Belle-2, Fopi, and GEM-TPC experiments. </longdescription> - <upstream> - <remote-id type="sourceforge">genfit</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">genfit</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-physics/mc-tester/metadata.xml b/sci-physics/mc-tester/metadata.xml index 69def484a..d5c644419 100644 --- a/sci-physics/mc-tester/metadata.xml +++ b/sci-physics/mc-tester/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>piatlicki@gmail.com</email> - </maintainer> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>piatlicki@gmail.com</email> + </maintainer> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription> A universal tool for comparisons of Monte Carlo predictions in High Energy Physics </longdescription> - <use> - <flag name="hepmc">Compile <pkg>sci-physics/hepmc</pkg> interface</flag> - </use> + <use> + <flag name="hepmc">Compile <pkg>sci-physics/hepmc</pkg> interface</flag> + </use> </pkgmetadata> diff --git a/sci-physics/openmx/metadata.xml b/sci-physics/openmx/metadata.xml index ab9d7ec7c..46a304a17 100644 --- a/sci-physics/openmx/metadata.xml +++ b/sci-physics/openmx/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> -</maintainer> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-physics/qcl/metadata.xml b/sci-physics/qcl/metadata.xml index 1e2175038..89c0746cc 100644 --- a/sci-physics/qcl/metadata.xml +++ b/sci-physics/qcl/metadata.xml @@ -5,7 +5,7 @@ <email>A.G.Grozin@inp.nsk.su</email> <name>Andrey Grozin</name> </maintainer> -<maintainer type="project"> + <maintainer type="project"> <email>sci-physics@gentoo.org</email> <name>Gentoo Physics Project</name> </maintainer> diff --git a/sci-physics/quinoa/metadata.xml b/sci-physics/quinoa/metadata.xml index c5bbbd579..2e043b786 100644 --- a/sci-physics/quinoa/metadata.xml +++ b/sci-physics/quinoa/metadata.xml @@ -1,12 +1,12 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>junghans@gentoo.org</email> - <name>Christoph Junghans</name> - </maintainer> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> + <maintainer type="person"> + <email>junghans@gentoo.org</email> + <name>Christoph Junghans</name> + </maintainer> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-physics/root/metadata.xml b/sci-physics/root/metadata.xml index cbfb8dd09..0c8f9b1b2 100644 --- a/sci-physics/root/metadata.xml +++ b/sci-physics/root/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>bircoph@gentoo.org</email> - <name>Andrew Savchenko</name> - </maintainer> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>bircoph@gentoo.org</email> + <name>Andrew Savchenko</name> + </maintainer> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> ROOT Object Oriented Technologies is an object oriented data analysis framework written in C++ by the CERN. Widely used in high energy physics, but also in other data analysis applications. It @@ -17,13 +17,13 @@ statistics, serialization, optimization, linear algebra, graphics, GUI toolkit, and a complete visualization framework. </longdescription> - <use> - <flag name="fits">Support for images and data from FITS files with <pkg>sci-libs/cfitsio</pkg></flag> - <flag name="geocad">Enable ROOT-CAD interface using <pkg>sci-libs/opencascade</pkg></flag> - <flag name="http">Enable http server support including but not limited to fastcgi support</flag> - <flag name="math">Build all math related libraries plugins, needs <pkg>sci-libs/gsl</pkg> </flag> - <flag name="pythia6">Build the interface for <pkg>sci-physics/pythia</pkg> version 6.x </flag> - <flag name="pythia8">Build the interface for <pkg>sci-physics/pythia</pkg> version 8.x </flag> - <flag name="xrootd">Build the interface for <pkg>net-libs/xrootd</pkg> </flag> - </use> + <use> + <flag name="fits">Support for images and data from FITS files with <pkg>sci-libs/cfitsio</pkg></flag> + <flag name="geocad">Enable ROOT-CAD interface using <pkg>sci-libs/opencascade</pkg></flag> + <flag name="http">Enable http server support including but not limited to fastcgi support</flag> + <flag name="math">Build all math related libraries plugins, needs <pkg>sci-libs/gsl</pkg> </flag> + <flag name="pythia6">Build the interface for <pkg>sci-physics/pythia</pkg> version 6.x </flag> + <flag name="pythia8">Build the interface for <pkg>sci-physics/pythia</pkg> version 8.x </flag> + <flag name="xrootd">Build the interface for <pkg>net-libs/xrootd</pkg> </flag> + </use> </pkgmetadata> diff --git a/sci-physics/tauola/metadata.xml b/sci-physics/tauola/metadata.xml index fe174bc56..156973cdd 100644 --- a/sci-physics/tauola/metadata.xml +++ b/sci-physics/tauola/metadata.xml @@ -1,18 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>piatlicki@gmail.com</email> - </maintainer> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>piatlicki@gmail.com</email> + </maintainer> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription> tau decay Monte Carlo generator </longdescription> - <use> - <flag name="hepmc">Compile <pkg>sci-physics/hepmc</pkg> interface</flag> - <flag name="tau-spinner">Compile with TauSpinner library</flag> - </use> + <use> + <flag name="hepmc">Compile <pkg>sci-physics/hepmc</pkg> interface</flag> + <flag name="tau-spinner">Compile with TauSpinner library</flag> + </use> </pkgmetadata> diff --git a/sci-physics/vgm/metadata.xml b/sci-physics/vgm/metadata.xml index 1806bf5d3..e1161fd12 100644 --- a/sci-physics/vgm/metadata.xml +++ b/sci-physics/vgm/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> -</maintainer> -<longdescription lang="en"> + <maintainer type="project"> + <email>sci-physics@gentoo.org</email> + <name>Gentoo Physics Project</name> + </maintainer> + <longdescription lang="en"> The Virtual Geometry Model (VGM) is an abstraction layer between the Geant4 and ROOT software. </longdescription> -<use> - <flag name="geant4">Enable interaction with Geant4(<pkg>sci-physics/geant</pkg>:4) </flag> - <flag name="root">Enable interactions with ROOT (<pkg>sci-physics/root</pkg>) </flag> -</use> + <use> + <flag name="geant4">Enable interaction with Geant4(<pkg>sci-physics/geant</pkg>:4) </flag> + <flag name="root">Enable interactions with ROOT (<pkg>sci-physics/root</pkg>) </flag> + </use> </pkgmetadata> diff --git a/sci-visualization/forge/metadata.xml b/sci-visualization/forge/metadata.xml index 010970cee..b328860fa 100644 --- a/sci-visualization/forge/metadata.xml +++ b/sci-visualization/forge/metadata.xml @@ -1,22 +1,22 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>marbre@linux.sungazer.de</email> - <name>Marius Brehler</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="person"> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> A prototype of the OpenGL interop library that can be used with ArrayFire. The goal of Forge is to provide high performance OpenGL visualizations for C/C++ applications that use CUDA/OpenCL. Forge uses OpenGL >=3.3 forward compatible contexts, so please make sure you have capable hardware before trying it out. </longdescription> - <upstream> - <remote-id type="github">arrayfire/forge</remote-id> - </upstream> + <upstream> + <remote-id type="github">arrayfire/forge</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-visualization/mricrogl/metadata.xml b/sci-visualization/mricrogl/metadata.xml index 62f47f127..027d04271 100644 --- a/sci-visualization/mricrogl/metadata.xml +++ b/sci-visualization/mricrogl/metadata.xml @@ -1,17 +1,17 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> MRIcroGL is a program designed to display 3D medical imaging. By using your computer's graphics card, it can allow real-time interactive rendering. It includes scripts to show you some of the many effects. </longdescription> - <upstream> - <remote-id type="github">neurolabusc/MRIcroGL</remote-id> - </upstream> + <upstream> + <remote-id type="github">neurolabusc/MRIcroGL</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-visualization/mricron/metadata.xml b/sci-visualization/mricron/metadata.xml index f2ec963bd..164af13ca 100644 --- a/sci-visualization/mricron/metadata.xml +++ b/sci-visualization/mricron/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> MRIcron is a simple medical imaging visualization tool written in Lazarus. </longdescription> - <upstream> - <remote-id type="github">neurolabusc/MRIcron</remote-id> - </upstream> + <upstream> + <remote-id type="github">neurolabusc/MRIcron</remote-id> + </upstream> </pkgmetadata> diff --git a/sci-visualization/nodemon/metadata.xml b/sci-visualization/nodemon/metadata.xml index 46b38f8e9..247df48ac 100644 --- a/sci-visualization/nodemon/metadata.xml +++ b/sci-visualization/nodemon/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="person"> diff --git a/sci-visualization/surf-ice/metadata.xml b/sci-visualization/surf-ice/metadata.xml index c30540d2e..434c6e79a 100644 --- a/sci-visualization/surf-ice/metadata.xml +++ b/sci-visualization/surf-ice/metadata.xml @@ -1,4 +1,4 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> <maintainer type="project"> diff --git a/sci-visualization/v_sim/metadata.xml b/sci-visualization/v_sim/metadata.xml index 91195a1a1..6a2245773 100644 --- a/sci-visualization/v_sim/metadata.xml +++ b/sci-visualization/v_sim/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>dongxuli2011@gmail.com</email> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <use> - <flag name="abinit">Add support for ABINIT file formats <pkg>sci-physics/abinit</pkg></flag> - <flag name="cube">Add support plug-in support for Cube files (densities and structures)</flag> - <flag name="openbabel">Add support for ABINIT file formats <pkg>sci-chemistry/openbabel</pkg></flag> - <flag name="xsf">plug-in support for files that follow the XCrysDen format for structural positions and densities</flag> - </use> + <maintainer type="person"> + <email>dongxuli2011@gmail.com</email> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <use> + <flag name="abinit">Add support for ABINIT file formats <pkg>sci-physics/abinit</pkg></flag> + <flag name="cube">Add support plug-in support for Cube files (densities and structures)</flag> + <flag name="openbabel">Add support for ABINIT file formats <pkg>sci-chemistry/openbabel</pkg></flag> + <flag name="xsf">plug-in support for files that follow the XCrysDen format for structural positions and densities</flag> + </use> </pkgmetadata> diff --git a/sci-visualization/yt/metadata.xml b/sci-visualization/yt/metadata.xml index 8d0c498af..4d8ce0f34 100644 --- a/sci-visualization/yt/metadata.xml +++ b/sci-visualization/yt/metadata.xml @@ -1,21 +1,21 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>xarthisius@gentoo.org</email> - <name>Kacper Kowalik</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription>yt is an analysis and visualization system written in Python, + <maintainer type="person"> + <email>xarthisius@gentoo.org</email> + <name>Kacper Kowalik</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription>yt is an analysis and visualization system written in Python, designed for use with Astrophysical Simulation codes. yt can process data in a myriad of ways and make a variety of visualizations. It is designed to be portable across simulation codes, and it is developed by developers from a variety of institutions and backgrounds. </longdescription> - <upstream> - <remote-id type="pypi">yt</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">yt</remote-id> + </upstream> </pkgmetadata> diff --git a/sys-cluster/blcr/metadata.xml b/sys-cluster/blcr/metadata.xml index bd6926bad..76dfb6d1d 100644 --- a/sys-cluster/blcr/metadata.xml +++ b/sys-cluster/blcr/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <longdescription> Berkeley Lab Checkpoint/Restart for Linux </longdescription> </pkgmetadata> diff --git a/sys-cluster/empi/metadata.xml b/sys-cluster/empi/metadata.xml index 1c68ec9b5..c74b39b01 100644 --- a/sys-cluster/empi/metadata.xml +++ b/sys-cluster/empi/metadata.xml @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jsbronder@gentoo.org</email> - </maintainer> -<maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> + <maintainer type="person"> + <email>jsbronder@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> </pkgmetadata> diff --git a/sys-cluster/hpl/metadata.xml b/sys-cluster/hpl/metadata.xml index f3834ba82..8bf4b5f36 100644 --- a/sys-cluster/hpl/metadata.xml +++ b/sys-cluster/hpl/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> </pkgmetadata> diff --git a/sys-cluster/htcondor/metadata.xml b/sys-cluster/htcondor/metadata.xml index 32ec6ea2e..40cc4e0b3 100644 --- a/sys-cluster/htcondor/metadata.xml +++ b/sys-cluster/htcondor/metadata.xml @@ -1,14 +1,14 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>cjk34@cam.ac.uk</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>cjk34@cam.ac.uk</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <longdescription lang="en"> HTCondor is a open-source, specialized workload management system for compute-intensive jobs. Like other full-featured batch systems, HTCondor provides a job queueing mechanism, scheduling policy, priority scheme, @@ -19,16 +19,16 @@ also contains mechanisms to submit jobs to grid-sites and supports many different grid toolkits. </longdescription> - <use> - <flag name="boinc">Enable backfill with BOINC jobs when the cluster is not being used</flag> - <flag name="cgroup">Use <pkg>dev-libs/libcgroup</pkg> for kernel control groups</flag> - <flag name="contrib">Build contrib modules</flag> - <flag name="dmtcp">Use <pkg>sys-apps/dmtcp</pkg> for checkpointing</flag> - <flag name="libvirt">Use <pkg>app-emulation/libvirt</pkg> for virtualisation</flag> - <flag name="minimal">Don't support standard universe jobs</flag> - <flag name="X">Enable the HTCondor Keyboard Daemon to monitor logged in X users for activity</flag> - </use> - <upstream> - <remote-id type="github">htcondor/htcondor</remote-id> - </upstream> + <use> + <flag name="boinc">Enable backfill with BOINC jobs when the cluster is not being used</flag> + <flag name="cgroup">Use <pkg>dev-libs/libcgroup</pkg> for kernel control groups</flag> + <flag name="contrib">Build contrib modules</flag> + <flag name="dmtcp">Use <pkg>sys-apps/dmtcp</pkg> for checkpointing</flag> + <flag name="libvirt">Use <pkg>app-emulation/libvirt</pkg> for virtualisation</flag> + <flag name="minimal">Don't support standard universe jobs</flag> + <flag name="X">Enable the HTCondor Keyboard Daemon to monitor logged in X users for activity</flag> + </use> + <upstream> + <remote-id type="github">htcondor/htcondor</remote-id> + </upstream> </pkgmetadata> diff --git a/sys-cluster/lustre/metadata.xml b/sys-cluster/lustre/metadata.xml index 04a532757..bb4904291 100644 --- a/sys-cluster/lustre/metadata.xml +++ b/sys-cluster/lustre/metadata.xml @@ -1,18 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <longdescription> Lustre is a parallel distributed file system, generally used for large scale cluster computing </longdescription> - <use> - <flag name="client">Enable kernel client modules</flag> - <flag name="dlc">Enable Dynamic LNET Configuration</flag> - <flag name="server">Enable kernels server modules</flag> - <flag name="utils">Enable lustre utils</flag> - <flag name="tests">Enable installation of tests</flag> - </use> + <use> + <flag name="client">Enable kernel client modules</flag> + <flag name="dlc">Enable Dynamic LNET Configuration</flag> + <flag name="server">Enable kernels server modules</flag> + <flag name="utils">Enable lustre utils</flag> + <flag name="tests">Enable installation of tests</flag> + </use> </pkgmetadata> diff --git a/sys-cluster/modules/metadata.xml b/sys-cluster/modules/metadata.xml index c3afebb3f..fefc52f77 100644 --- a/sys-cluster/modules/metadata.xml +++ b/sys-cluster/modules/metadata.xml @@ -1,22 +1,22 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>nicolasbock@gentoo.org</email> - <name>Nicolas Bock</name> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>nicolasbock@gentoo.org</email> + <name>Nicolas Bock</name> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <longdescription lang="en"> The environment modules package provides for an easy dynamic modification of a user's environment via modulefiles. which typically instruct the module command to alter or set shell environment variables such as PATH, MANPATH, etc. as well as define aliases over a variety of shells. </longdescription> - <upstream> - <remote-id type="sourceforge">modules</remote-id> - </upstream> + <upstream> + <remote-id type="sourceforge">modules</remote-id> + </upstream> </pkgmetadata> diff --git a/sys-cluster/mpich2/metadata.xml b/sys-cluster/mpich2/metadata.xml index 3b1e6389f..6cbe440fa 100644 --- a/sys-cluster/mpich2/metadata.xml +++ b/sys-cluster/mpich2/metadata.xml @@ -1,21 +1,21 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jsbronder@gentoo.org</email> - <name>Justin Bronder</name> - </maintainer> - <maintainer type="person"> - <email>balaji@mcs.anl.gov</email> - <name>Pavan Balaji</name> - <description>Upstream Contact</description> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="mpi-threads">Enable MPI_THREAD_MULTIPLE</flag> - <flag name="romio">Build the ROMIO MPI-IO component</flag> - </use> + <maintainer type="person"> + <email>jsbronder@gentoo.org</email> + <name>Justin Bronder</name> + </maintainer> + <maintainer type="person"> + <email>balaji@mcs.anl.gov</email> + <name>Pavan Balaji</name> + <description>Upstream Contact</description> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="mpi-threads">Enable MPI_THREAD_MULTIPLE</flag> + <flag name="romio">Build the ROMIO MPI-IO component</flag> + </use> </pkgmetadata> diff --git a/sys-cluster/mvapich2/metadata.xml b/sys-cluster/mvapich2/metadata.xml index 2c8285bf4..50e4975c9 100644 --- a/sys-cluster/mvapich2/metadata.xml +++ b/sys-cluster/mvapich2/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <longdescription> MVAPICH2 MPI-over-infiniband package auto-configured for OpenIB. </longdescription> - <use> - <flag name="large-cluster">Automatically generated description for large-cluster</flag> - <flag name="medium-cluster">Automatically generated description for medium-cluster</flag> - <flag name="romio">Automatically generated description for romio</flag> - </use> + <use> + <flag name="large-cluster">Automatically generated description for large-cluster</flag> + <flag name="medium-cluster">Automatically generated description for medium-cluster</flag> + <flag name="romio">Automatically generated description for romio</flag> + </use> </pkgmetadata> diff --git a/sys-cluster/openmpi/metadata.xml b/sys-cluster/openmpi/metadata.xml index 214eab6e2..eb1125c2a 100644 --- a/sys-cluster/openmpi/metadata.xml +++ b/sys-cluster/openmpi/metadata.xml @@ -1,21 +1,21 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jsbronder@gentoo.org</email> - </maintainer> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <use> - <flag name="cma">Enable the CMA (Cross Memory Attach) MCA</flag> - <flag name="cuda">Add GPU direct support</flag> - <flag name="heterogeneous">Enable features required for heterogeneous + <maintainer type="person"> + <email>jsbronder@gentoo.org</email> + </maintainer> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <use> + <flag name="cma">Enable the CMA (Cross Memory Attach) MCA</flag> + <flag name="cuda">Add GPU direct support</flag> + <flag name="heterogeneous">Enable features required for heterogeneous platform support</flag> - <flag name="romio">Build the ROMIO MPI-IO component</flag> - <flag name="mpi-threads">Enable MPI_THREAD_MULTIPLE</flag> - <flag name="numa">Enable numactl to allow binding processes to CPUs</flag> - <flag name="vt">Enable bundled VampirTrace support</flag> - </use> + <flag name="romio">Build the ROMIO MPI-IO component</flag> + <flag name="mpi-threads">Enable MPI_THREAD_MULTIPLE</flag> + <flag name="numa">Enable numactl to allow binding processes to CPUs</flag> + <flag name="vt">Enable bundled VampirTrace support</flag> + </use> </pkgmetadata> diff --git a/sys-cluster/ovis/metadata.xml b/sys-cluster/ovis/metadata.xml index 63e032dec..0b76ff6c8 100644 --- a/sys-cluster/ovis/metadata.xml +++ b/sys-cluster/ovis/metadata.xml @@ -1,14 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>andyspiros@gmail.com</email> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="person"> + <email>andyspiros@gmail.com</email> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> The OVIS project addresses scalable, real-time statistical analysis of very large data sets. It contains tools for intelligent, real-time monitoring of large computational clusters and lossless, deterministic diff --git a/sys-cluster/pyslice/metadata.xml b/sys-cluster/pyslice/metadata.xml index ac3fb7b1e..6088e6841 100644 --- a/sys-cluster/pyslice/metadata.xml +++ b/sys-cluster/pyslice/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>cluster@gentoo.org</email> - <name>Gentoo Cluster Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>cluster@gentoo.org</email> + <name>Gentoo Cluster Project</name> + </maintainer> + <longdescription> Templating system for parametric modeling. </longdescription> - <upstream> - <remote-id type="pypi">pyslice</remote-id> - <remote-id type="sourceforge">pyslice</remote-id> - </upstream> + <upstream> + <remote-id type="pypi">pyslice</remote-id> + <remote-id type="sourceforge">pyslice</remote-id> + </upstream> </pkgmetadata> diff --git a/virtual/blacs/metadata.xml b/virtual/blacs/metadata.xml index 3dbc7827b..e67e1faad 100644 --- a/virtual/blacs/metadata.xml +++ b/virtual/blacs/metadata.xml @@ -1,15 +1,15 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Gentoo virtual package for the Basic Linear Algebra Communication Subprograms implementation. </longdescription> - <use> - <flag name="int64">Add eselect module for blas libraries built with 64 bits + <use> + <flag name="int64">Add eselect module for blas libraries built with 64 bits integer ABI</flag> - </use> + </use> </pkgmetadata> diff --git a/virtual/blas/metadata.xml b/virtual/blas/metadata.xml index 55119ed2b..560890ba6 100644 --- a/virtual/blas/metadata.xml +++ b/virtual/blas/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Gentoo virtual package for the Basic Linear Algebra Subprograms FORTRAN 77 implementation. </longdescription> - <use> - <flag name="int64">Add eselect module for blas libraries built with 64 bits + <use> + <flag name="int64">Add eselect module for blas libraries built with 64 bits integer ABI</flag> - </use> + </use> </pkgmetadata> diff --git a/virtual/cblas/metadata.xml b/virtual/cblas/metadata.xml index 2206cdb3d..54c108f30 100644 --- a/virtual/cblas/metadata.xml +++ b/virtual/cblas/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Gentoo virtual package for the Basic Linear Algebra Subprograms C implementation. </longdescription> - <use> - <flag name="int64">Add eselect module for cblas libraries built with 64 bits + <use> + <flag name="int64">Add eselect module for cblas libraries built with 64 bits integer ABI</flag> - </use> + </use> </pkgmetadata> diff --git a/virtual/lapack/metadata.xml b/virtual/lapack/metadata.xml index 35a73f5f2..8c595d98c 100644 --- a/virtual/lapack/metadata.xml +++ b/virtual/lapack/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Gentoo virtual package for the Linear Algebra PACKAge FORTRAN 77 implementation. The version number corresponds to the version of the LAPACK reference implementation. </longdescription> - <use> - <flag name="int64">Add eselect module for lapack libraries built with 64 bits + <use> + <flag name="int64">Add eselect module for lapack libraries built with 64 bits integer ABI</flag> - </use> + </use> </pkgmetadata> diff --git a/virtual/lapacke/metadata.xml b/virtual/lapacke/metadata.xml index f8d8b36a7..1417d5179 100644 --- a/virtual/lapacke/metadata.xml +++ b/virtual/lapacke/metadata.xml @@ -1,16 +1,16 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Gentoo virtual package for the Linear Algebra PACKAge C implementation. </longdescription> - <use> - <flag name="int64">Add eselect module for blas libraries built with 64 bits + <use> + <flag name="int64">Add eselect module for blas libraries built with 64 bits integer ABI</flag> - </use> + </use> </pkgmetadata> diff --git a/virtual/perl-encoding-warnings/metadata.xml b/virtual/perl-encoding-warnings/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/virtual/perl-encoding-warnings/metadata.xml +++ b/virtual/perl-encoding-warnings/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/virtual/scalapack/metadata.xml b/virtual/scalapack/metadata.xml index 6e0251299..bbfa377f1 100644 --- a/virtual/scalapack/metadata.xml +++ b/virtual/scalapack/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription lang="en"> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> Gentoo virtual package for the Scalable LAPACK implementation. The version number corresponds to the version of the ScaLAPACK reference implementation. </longdescription> - <use> - <flag name="int64">Add eselect module for blas libraries built with 64 bits + <use> + <flag name="int64">Add eselect module for blas libraries built with 64 bits integer ABI</flag> - </use> + </use> </pkgmetadata> diff --git a/x11-libs/agg/metadata.xml b/x11-libs/agg/metadata.xml index 0497e0eb4..e5a557aa7 100644 --- a/x11-libs/agg/metadata.xml +++ b/x11-libs/agg/metadata.xml @@ -1,17 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <longdescription> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription> Anti-Grain Geometry (AGG) is a general purpose graphical toolkit written completely in standard and platform independent C++. It can be used in many areas of computer programming where high quality 2D graphics is an essential part of the project. </longdescription> - <use> - <flag name="gpc">Enable gpc polygon clipper library</flag> - </use> + <use> + <flag name="gpc">Enable gpc polygon clipper library</flag> + </use> </pkgmetadata> diff --git a/x11-libs/tr/metadata.xml b/x11-libs/tr/metadata.xml index 8425c0d53..ae9640ffb 100644 --- a/x11-libs/tr/metadata.xml +++ b/x11-libs/tr/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/x11-libs/xview-bin/metadata.xml b/x11-libs/xview-bin/metadata.xml index 1d8b530a6..d9927d9fd 100644 --- a/x11-libs/xview-bin/metadata.xml +++ b/x11-libs/xview-bin/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - <name>Justin Lecher</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + <name>Justin Lecher</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/x11-libs/xview/metadata.xml b/x11-libs/xview/metadata.xml index 1d8b530a6..d9927d9fd 100644 --- a/x11-libs/xview/metadata.xml +++ b/x11-libs/xview/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>jlec@gentoo.org</email> - <name>Justin Lecher</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> + <maintainer type="person"> + <email>jlec@gentoo.org</email> + <name>Justin Lecher</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> </pkgmetadata> diff --git a/x11-misc/envytools/metadata.xml b/x11-misc/envytools/metadata.xml index a0fe55dd7..f19f9e41c 100644 --- a/x11-misc/envytools/metadata.xml +++ b/x11-misc/envytools/metadata.xml @@ -1,15 +1,15 @@ -<?xml version='1.0' encoding='UTF-8'?> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer type="person"> - <email>alexxy@gentoo.org</email> - <name>Alexey Shvetsov</name> - </maintainer> - <maintainer type="project"> - <email>sci@gentoo.org</email> - <name>Gentoo Science Project</name> - </maintainer> - <upstream> - <remote-id type="github">pathscale/envytools</remote-id> - </upstream> + <maintainer type="person"> + <email>alexxy@gentoo.org</email> + <name>Alexey Shvetsov</name> + </maintainer> + <maintainer type="project"> + <email>sci@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <upstream> + <remote-id type="github">pathscale/envytools</remote-id> + </upstream> </pkgmetadata> |