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# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-3.27.ebuild,v 1.2 2005/12/08 19:48:52 ribosome Exp $
inherit toolchain-funcs
DESCRIPTION="A multiple sequence alignment package"
LICENSE="t-coffee"
HOMEPAGE="http://igs-server.cnrs-mrs.fr/~cnotred/Projects_home_page/t_coffee_home_page.html"
SRC_URI="http://igs-server.cnrs-mrs.fr/~cnotred/Packages/T-COFFEE_distribution_Version_${PV}.tar.gz"
SLOT="0"
IUSE=""
KEYWORDS="~ppc ~x86"
RESTRICT="nomirror"
DEPEND="sci-biology/clustalw"
TCDIR="${WORKDIR}/T-COFFEE_distribution_Version_${PV}"
S="${TCDIR}/t_coffee_source"
src_unpack() {
unpack ${A}
cd "${S}"
sed -e "s/CC = cc/CC = $(tc-getCC) ${CFLAGS}/" -i makefile || die \
"Failed to patch makefile."
}
die_compile() {
echo
eerror "If you experience an internal compiler error (consult the above"
eerror "messages), try compiling t-coffee using very modest compiler flags."
eerror "See bug #114745 on the Gentoo Bugzilla for more details."
die "Compilation failed"
}
src_compile() {
make all || die_compile
}
src_install() {
cd "${TCDIR}"/bin
dobin t_coffee || die "Failed to install program."
insinto /usr/share/${PN}/lib/html
doins ${TCDIR}/html/* || die "Failed to install HTML documentation,"
dodoc ${TCDIR}/doc/README4T-COFFEE || die \
"Failed to install basic documentation."
insinto /usr/share/doc/${PF}
doins ${TCDIR}/doc/t_coffee{_doc.{doc,pdf},.pdf} || die \
"Failed to install manuals and articles."
doins ${TCDIR}/doc/*.txt || die "Failed to install documentation."
insinto /usr/share/${PN}/example
doins ${TCDIR}/example/* || die "Failed to install example files."
}
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