1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
|
# Copyright 1999-2013 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/sparky/sparky-3.115-r1.ebuild,v 1.1 2013/07/18 11:22:37 jlec Exp $
EAPI=5
PYTHON_COMPAT=( python{2_6,2_7} )
PYTHON_REQ_USE="tk"
inherit eutils flag-o-matic multilib prefix python-single-r1 toolchain-funcs
DESCRIPTION="Graphical NMR assignment and integration program for proteins, nucleic acids, and other polymers"
HOMEPAGE="http://www.cgl.ucsf.edu/home/sparky/"
SRC_URI="http://www.cgl.ucsf.edu/home/sparky/distrib-${PV}/${PN}-source-${PV}.tar.gz"
LICENSE="sparky"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="examples"
RDEPEND="
app-shells/tcsh
dev-lang/tcl
dev-lang/tk"
DEPEND="${RDEPEND}"
RESTRICT="mirror"
S="${WORKDIR}/${PN}"
PATCHES=(
"${FILESDIR}"/${PV}-ldflags.patch
"${FILESDIR}"/${PV}-wrapper-r1.patch
"${FILESDIR}"/${PV}-paths.patch
"${FILESDIR}"/${PV}-makefile.patch
)
pkg_setup() {
python-single-r1_pkg_setup
TKVER=$(best_version dev-lang/tk | cut -d- -f3 | cut -d. -f1,2)
PYVER=${EPYTHON#python}
}
src_prepare() {
epatch ${PATCHES[@]}
sed -i \
-e "s:^\(set PYTHON =\).*:\1 ${EPREFIX}/usr/bin/${EPYTHON}:g" \
-e "s:^\(setenv SPARKY_INSTALL[[:space:]]*\).*:\1 ${EPREFIX}/usr/$(get_libdir)/${PN}:g" \
-e "s:tcl8.4:tcl${TKVER}:g" \
-e "s:tk8.4:tk${TKVER}:g" \
-e "s:^\(setenv TCLTK_LIB[[:space:]]*\).*:\1 ${EPREFIX}/usr/$(get_libdir):g" \
"${S}"/bin/sparky || die
eprefixify "${S}"/bin/sparky
}
src_compile() {
emake \
SPARKY="${S}" \
PYTHON_VERSION="${PYVER}" \
PYTHON_PREFIX="${EPREFIX}/usr" \
PYTHON_LIB="${EPREFIX}/usr/$(get_libdir)" \
PYTHON_INC="${EPREFIX}/usr/include/${EPYTHON}" \
TK_PREFIX="${EPREFIX}/usr" \
TCLTK_VERSION="${TKVER}" \
TKLIBS="-L${EPREFIX}/usr/$(get_libdir)/ -ltk -ltcl -lX11" \
CXX="$(tc-getCXX)" \
CC="$(tc-getCC)" \
LDSHARED="-shared" \
binaries
rm c++/*.o || die
emake \
SPARKY="${S}" \
PYTHON_VERSION="${PYVER}" \
PYTHON_PREFIX="${EPREFIX}/usr" \
PYTHON_LIB="${EPREFIX}/usr/$(get_libdir)" \
PYTHON_INC="${EPREFIX}/usr/include/${EPYTHON}" \
TK_PREFIX="${EPREFIX}/usr" \
TCLTK_VERSION="${TKVER}" \
TKLIBS="-L${EPREFIX}/usr/$(get_libdir)/ -ltk -ltcl -lX11" \
CXX="$(tc-getCXX)" \
CC="$(tc-getCC)" \
CXXFLAGS="${CXXFLAGS} -fPIC" \
CFLAGS="${CFLAGS} -fPIC" \
LDSHARED="-shared -fPIC" \
libraries
}
src_install() {
# The symlinks are needed to avoid hacking the complete code to fix the locations
dobin c++/{{bruk,matrix,peaks,pipe,vnmr}2ucsf,ucsfdata,sparky-no-python} bin/${PN}
insinto /usr/share/${PN}/
doins lib/{print-prolog.ps,Sparky}
dosym ../../share/${PN}/print-prolog.ps /usr/$(get_libdir)/${PN}/print-prolog.ps
dosym ../../share/${PN}/Sparky /usr/$(get_libdir)/${PN}/Sparky
dohtml -r manual/*
dosym ../../share/doc/${PF}/html /usr/$(get_libdir)/${PN}/manual
python_moduleinto ${PN}
python_domodule python/*.py c++/{spy.so,_tkinter.so}
python_optimize
dosym ../${EPYTHON}/site-packages /usr/$(get_libdir)/${PN}/python
if use examples; then
insinto /usr/share/doc/${PF}/
doins -r example || die
dosym ../../share/doc/${PF}/example /usr/$(get_libdir)/${PN}/example
fi
dodoc README
newdoc python/README README.python
}
|
GitWeb