1 files changed, 0 insertions, 142 deletions
diff --git a/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild b/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild
deleted file mode 100644
index d083881ab707..000000000000
--- a/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild
+++ /dev/null
@@ -1,142 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r4.ebuild,v 1.17 2013/04/23 14:01:32 jlec Exp $
-
-EAPI="3"
-
-PYTHON_DEPEND="python? 2"
-
-inherit autotools eutils flag-o-matic fortran-2 python toolchain-funcs versionator
-
-MY_PV=$(get_version_component_range 1-3)
-MY_P="${PN}-${MY_PV}"
-
-DESCRIPTION="Evaluation of electrostatic properties of nanoscale biomolecular systems"
-HOMEPAGE="http://www.poissonboltzmann.org/apbs/"
-SRC_URI="mirror://sourceforge/${PN}/${P}-source.tar.gz"
-
-SLOT="0"
-LICENSE="BSD"
-IUSE="arpack doc mpi openmp python tools"
-KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux"
-
-RDEPEND="
-	dev-libs/maloc[mpi=]
-	virtual/blas
-	sys-libs/readline
-	arpack? ( sci-libs/arpack )
-	tools? ( !sci-libs/gts )
-	mpi? ( virtual/mpi )"
-DEPEND="${DEPEND}
-	virtual/pkgconfig"
-
-S="${WORKDIR}"/"${MY_P}-source"
-
-pkg_setup() {
-	fortran-2_pkg_setup
-	use python && python_set_active_version 2
-}
-
-src_prepare() {
-	epatch \
-		"${FILESDIR}"/${P}-openmp.patch \
-		"${FILESDIR}"/${P}-install-fix.patch \
-		"${FILESDIR}"/${PN}-1.2.0-contrib.patch \
-		"${FILESDIR}"/${PN}-1.2.0-link.patch \
-		"${FILESDIR}"/${P}-autoconf-2.64.patch \
-		"${FILESDIR}"/${P}-shared.patch \
-		"${FILESDIR}"/${P}-multilib.patch \
-		"${FILESDIR}"/${P}-parallelbuild.patch
-	sed "s:GENTOO_PKG_NAME:${PN}:g" \
-		-i Makefile.am || die "Cannot correct package name"
-	# this test is broken
-	sed '/ion-pmf/d' -i examples/Makefile.am || die
-	eautoreconf
-	find . -name "._*" -exec rm -f '{}' \;
-}
-
-src_configure() {
-	local myconf="--docdir=${EPREFIX}/usr/share/doc/${PF}"
-	use arpack && myconf="${myconf} --with-arpack=${EPREFIX}/usr/$(get_libdir)"
-
-	# check which mpi version is installed and tell configure
-	if use mpi; then
-		export CC="${EPREFIX}/usr/bin/mpicc"
-		export F77="${EPREFIX}/usr/bin/mpif77"
-
-		if has_version sys-cluster/mpich; then
-	 		myconf="${myconf} --with-mpich=${EPREFIX}/usr"
-		elif has_version sys-cluster/mpich2; then
-			myconf="${myconf} --with-mpich2=${EPREFIX}/usr"
-		elif has_version sys-cluster/openmpi; then
-			myconf="${myconf} --with-openmpi=${EPREFIX}/usr"
-		fi
-	fi || die "Failed to select proper mpi implementation"
-
-	# we need the tools target for python
-	if use python && ! use tools; then
-		myconf="${myconf} --enable-tools"
-	fi
-
-	econf \
-		--disable-maloc-rebuild \
-		--enable-shared \
-		--with-blas="$($(tc-getPKG_CONFIG) --libs blas)" \
-		$(use_enable openmp) \
-		$(use_enable python) \
-		$(use_enable tools) \
-		${myconf}
-}
-
-src_test() {
-	export LC_NUMERIC=C
-	cd examples && make test \
-		|| die "Tests failed"
-	grep -q 'FAILED' "${S}"/examples/TESTRESULTS.log && die "Tests failed"
-}
-
-src_install() {
-	emake -j1 DESTDIR="${D}" install \
-		|| die "make install failed"
-
-	if use tools; then
-		mv tools/mesh/{,mesh-}analysis || die
-		dobin tools/mesh/* || die
-
-		if use arpack; then
-			dobin tools/arpack/* || die
-		fi
-
-		insinto /usr/share/${PN}
-		doins -r tools/conversion || die
-		doins -r tools/visualization/opendx || die
-
-		dobin tools/manip/{born,coulomb} || die
-
-		doins -r tools/matlab || die
-	fi
-
-	insinto $(python_get_sitedir)/${PN}
-	doins tools/manip/*.py || die
-
-	if use python && ! use mpi; then
-		insinto $(python_get_sitedir)/${PN}
-		doins tools/python/{*.py,*.pqr,*.so} || die
-		doins tools/python/*/{*.py,*.so} || die
-	fi
-
-	dodoc AUTHORS INSTALL README NEWS ChangeLog \
-		|| die "Failed to install docs"
-
-	if use doc; then
-		dohtml -r doc/* || die "Failed to install html docs"
-	fi
-}
-
-pkg_postinst() {
-	python_mod_optimize ${PN}
-}
-
-pkg_postrm() {
-	python_mod_cleanup ${PN}
-}