diff options
author | Sebastien Fabbro <bicatali@gentoo.org> | 2012-01-19 15:06:57 +0000 |
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committer | Sebastien Fabbro <bicatali@gentoo.org> | 2012-01-19 15:06:57 +0000 |
commit | 6ea2f5e162d1d0e60a1f6b5f3f6404bfe9e3bc6b (patch) | |
tree | eb3142b794049fd41fcecbc9385544907906c80c /sci-mathematics | |
parent | Stable for HPPA (bug #398947). (diff) | |
download | gentoo-2-6ea2f5e162d1d0e60a1f6b5f3f6404bfe9e3bc6b.tar.gz gentoo-2-6ea2f5e162d1d0e60a1f6b5f3f6404bfe9e3bc6b.tar.bz2 gentoo-2-6ea2f5e162d1d0e60a1f6b5f3f6404bfe9e3bc6b.zip |
Version bump. Fixed configure option for imagemagick/graphicsmagick
(Portage version: 2.1.10.41/cvs/Linux x86_64)
Diffstat (limited to 'sci-mathematics')
17 files changed, 199 insertions, 650 deletions
diff --git a/sci-mathematics/octave/ChangeLog b/sci-mathematics/octave/ChangeLog index 4aac4b130d97..aaf83b7e26e2 100644 --- a/sci-mathematics/octave/ChangeLog +++ b/sci-mathematics/octave/ChangeLog @@ -1,6 +1,20 @@ # ChangeLog for sci-mathematics/octave # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/octave/ChangeLog,v 1.110 2012/01/17 17:17:12 xarthisius Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/octave/ChangeLog,v 1.111 2012/01/19 15:06:57 bicatali Exp $ + +*octave-3.6.0 (19 Jan 2012) + + 19 Jan 2012; Sébastien Fabbro <bicatali@gentoo.org> + -files/octave-3.2.4-addpath.patch, -files/octave-3.2.4-dlmread-speedup.patch, + -files/octave-3.2.4-filter-empty-vector.patch, + -files/octave-3.2.4-fltk-1.3.patch, -files/octave-3.2.4-imshow.patch, + -files/octave-3.2.4-interp2.patch, -files/octave-3.2.4-no-helvetica.patch, + -files/octave-3.2.4-normal-marker-size.patch, + -files/octave-3.4.0-curl-headers.patch, -files/octave-3.4.0-fftshift.patch, + -files/octave-3.4.0-fltk.patch, -files/octave-3.4.0-gcc46.patch, + octave-3.4.3-r1.ebuild, +files/octave-3.4.3-help.patch, + +files/octave-3.4.3-pkgbuilddir.patch, +octave-3.6.0.ebuild: + Version bump. Fixed configure option for imagemagick/graphicsmagick 17 Jan 2012; Kacper Kowalik <xarthisius@gentoo.org> octave-3.4.3-r1.ebuild: Add prefix keywords diff --git a/sci-mathematics/octave/files/octave-3.2.4-addpath.patch b/sci-mathematics/octave/files/octave-3.2.4-addpath.patch deleted file mode 100644 index c3b208b764d1..000000000000 --- a/sci-mathematics/octave/files/octave-3.2.4-addpath.patch +++ /dev/null @@ -1,20 +0,0 @@ -From: "Thomas Weber" <tweber@debian.org> -Subject: Don't crash on calling addpath('./') -Description: Octave 3.2 crashes when calling something like - echo "addpath('./'); addpath('./')" | octave - This patch originates from a larger patch from upstreams's development version. -Origin: partly upstream, http://hg.savannah.gnu.org/hgweb/octave/rev/4acae5e46738 -Bug-Debian: http://bugs.debian.org/592517 -Applied-Upstream: http://hg.savannah.gnu.org/hgweb/octave/rev/4acae5e46738 - ---- a/src/load-path.cc -+++ b/src/load-path.cc -@@ -653,8 +653,6 @@ - - if (i != dir_info_list.end ()) - move (i, false); -- else -- panic_impossible (); - } - - void diff --git a/sci-mathematics/octave/files/octave-3.2.4-dlmread-speedup.patch b/sci-mathematics/octave/files/octave-3.2.4-dlmread-speedup.patch deleted file mode 100644 index 3379a3de8f75..000000000000 --- a/sci-mathematics/octave/files/octave-3.2.4-dlmread-speedup.patch +++ /dev/null @@ -1,258 +0,0 @@ ---- src/DLD-FUNCTIONS/dlmread.cc.orig 2010-09-07 14:41:40.991671995 +0200 -+++ src/DLD-FUNCTIONS/dlmread.cc 2010-09-07 14:50:50.715672000 +0200 -@@ -1,6 +1,7 @@ - /* - - Copyright (C) 2008, 2009 Jonathan Stickel -+Copyright (C) 2010 Jaroslav Hajek - - This file is part of Octave. - -@@ -29,6 +30,7 @@ - - #include <cctype> - #include <fstream> -+#include <limits> - - #include "file-ops.h" - #include "lo-ieee.h" -@@ -38,8 +40,10 @@ - #include "oct-obj.h" - #include "utils.h" - -+static const octave_idx_type idx_max = std::numeric_limits<octave_idx_type>::max (); -+ - static bool --read_cell_spec (std::istream& is, unsigned long& row, unsigned long& col) -+read_cell_spec (std::istream& is, octave_idx_type& row, octave_idx_type& col) - { - bool stat = false; - -@@ -75,8 +79,8 @@ - - static bool - parse_range_spec (const octave_value& range_spec, -- unsigned long& rlo, unsigned long& clo, -- unsigned long& rup, unsigned long& cup) -+ octave_idx_type& rlo, octave_idx_type& clo, -+ octave_idx_type& rup, octave_idx_type& cup) - { - bool stat = true; - -@@ -115,8 +119,8 @@ - stat = false; - } - -- rup = ULONG_MAX - 1; -- cup = ULONG_MAX - 1; -+ rup = idx_max - 1; -+ cup = idx_max - 1; - } - else - { -@@ -138,10 +142,10 @@ - { - ColumnVector range(range_spec.vector_value ()); - // double --> unsigned int -- rlo = static_cast<unsigned long> (range(0)); -- clo = static_cast<unsigned long> (range(1)); -- rup = static_cast<unsigned long> (range(2)); -- cup = static_cast<unsigned long> (range(3)); -+ rlo = static_cast<octave_idx_type> (range(0)); -+ clo = static_cast<octave_idx_type> (range(1)); -+ rup = static_cast<octave_idx_type> (range(2)); -+ cup = static_cast<octave_idx_type> (range(3)); - } - else - stat = false; -@@ -211,7 +215,7 @@ - } - - // Take a subset if a range was given. -- unsigned long r0 = 0, c0 = 0, r1 = ULONG_MAX-1, c1 = ULONG_MAX-1; -+ octave_idx_type r0 = 0, c0 = 0, r1 = idx_max-1, c1 = idx_max-1; - if (nargin > 2) - { - if (nargin == 3) -@@ -221,17 +225,20 @@ - } - else if (nargin == 4) - { -- r0 = args(2).ulong_value (); -- c0 = args(3).ulong_value (); -+ r0 = args(2).idx_type_value (); -+ c0 = args(3).idx_type_value (); - - if (error_state) - return retval; - } -+ -+ if (r0 < 0 || c0 < 0) -+ error ("dlmread: left & top must not be negative"); - } - - if (!error_state) - { -- unsigned long i = 0, j = 0, r = 1, c = 1, rmax = 0, cmax = 0; -+ octave_idx_type i = 0, j = 0, r = 1, c = 1, rmax = 0, cmax = 0; - - Matrix rdata; - ComplexMatrix cdata; -@@ -239,15 +246,17 @@ - bool iscmplx = false; - bool sepflag = false; - -- unsigned long maxrows = r1 - r0; -+ octave_idx_type maxrows = r1 - r0; - - std::string line; - - // Skip the r0 leading lines as these might be a header. -- for (unsigned long m = 0; m < r0; m++) -+ for (octave_idx_type m = 0; m < r0; m++) - getline (file, line); - r1 -= r0; - -+ std::istringstream tmp_stream; -+ - // Read in the data one field at a time, growing the data matrix - // as needed. - while (getline (file, line)) -@@ -286,11 +295,47 @@ - } - } - -+ if (cmax == 0) -+ { -+ // Try to estimate the number of columns. -+ size_t pos1 = 0; -+ do -+ { -+ size_t pos2 = line.find_first_of (sep, pos1); -+ -+ if (sepflag && pos2 != std::string::npos) -+ // Treat consecutive separators as one. -+ { -+ pos2 = line.find_first_not_of (sep, pos2); -+ if (pos2 != std::string::npos) -+ pos2 -= 1; -+ else -+ pos2 = line.length () - 1; -+ } -+ -+ cmax++; -+ -+ if (pos2 != std::string::npos) -+ pos1 = pos2 + 1; -+ else -+ pos1 = std::string::npos; -+ -+ } -+ while (pos1 != std::string::npos); -+ -+ if (iscmplx) -+ cdata.resize (rmax, cmax); -+ else -+ rdata.resize (rmax, cmax); -+ } -+ - r = (r > i + 1 ? r : i + 1); - j = 0; - size_t pos1 = 0; - do - { -+ OCTAVE_QUIT; -+ - size_t pos2 = line.find_first_of (sep, pos1); - std::string str = line.substr (pos1, pos2 - pos1); - -@@ -303,23 +348,35 @@ - { - // Use resize_and_fill for the case of not-equal - // length rows. -+ rmax = 2*r; -+ cmax = c; - if (iscmplx) -- cdata.resize_fill (r, c, 0); -+ cdata.resize (rmax, cmax); - else -- rdata.resize_fill (r, c, 0); -- rmax = r; -- cmax = c; -+ rdata.resize (rmax, cmax); - } - -- std::istringstream tmp_stream (str); -+ tmp_stream.str (str); -+ tmp_stream.clear (); -+ - double x = octave_read_double (tmp_stream); - if (tmp_stream) - { - if (tmp_stream.eof ()) -- if (iscmplx) -- cdata(i,j++) = x; -- else -- rdata(i,j++) = x; -+ { -+ if (iscmplx) -+ cdata(i,j++) = x; -+ else -+ rdata(i,j++) = x; -+ } -+ else if (std::toupper (tmp_stream.peek ()) == 'I') -+ { -+ // This is to allow pure imaginary numbers. -+ if (iscmplx) -+ cdata(i,j++) = x; -+ else -+ rdata(i,j++) = x; -+ } - else - { - double y = octave_read_double (tmp_stream); -@@ -355,35 +412,16 @@ - i++; - } - -- if (nargin > 2) -- { -- if (nargin == 3) -- { -- if (r1 >= r) -- r1 = r - 1; -- if (c1 >= c) -- c1 = c - 1; -- } -- else if (nargin == 4) -- { -- // If r1 and c1 are not given, use what was found to be -- // the maximum. -- r1 = r - 1; -- c1 = c - 1; -- } -+ if (r1 >= r) -+ r1 = r - 1; -+ if (c1 >= c) -+ c1 = c - 1; - -- // Now take the subset of the matrix. -- if (iscmplx) -- { -- cdata = cdata.extract (0, c0, r1, c1); -- cdata.resize (r1 + 1, c1 - c0 + 1); -- } -- else -- { -- rdata = rdata.extract (0, c0, r1, c1); -- rdata.resize (r1 + 1, c1 - c0 + 1); -- } -- } -+ // Now take the subset of the matrix. -+ if (iscmplx) -+ cdata = cdata.extract (0, c0, r1, c1); -+ else -+ rdata = rdata.extract (0, c0, r1, c1); - - if (iscmplx) - retval(0) = cdata; diff --git a/sci-mathematics/octave/files/octave-3.2.4-filter-empty-vector.patch b/sci-mathematics/octave/files/octave-3.2.4-filter-empty-vector.patch deleted file mode 100644 index f6cace5b15e3..000000000000 --- a/sci-mathematics/octave/files/octave-3.2.4-filter-empty-vector.patch +++ /dev/null @@ -1,17 +0,0 @@ -From: "John W. Eaton" <jwe@octave.org> -Subject: Don't crash on filtering an empty vector -Origin: upstream, http://hg.savannah.gnu.org/hgweb/octave/rev/a277ba5da4dc -Bug-Debian: http://bugs.debian.org/567975 - ---- a/src/DLD-FUNCTIONS/filter.cc -+++ b/src/DLD-FUNCTIONS/filter.cc -@@ -117,6 +117,9 @@ - } - } - -+ if (x_len == 0) -+ return x; -+ - if (norm != static_cast<T>(1.0)) - { - a = a / norm; diff --git a/sci-mathematics/octave/files/octave-3.2.4-fltk-1.3.patch b/sci-mathematics/octave/files/octave-3.2.4-fltk-1.3.patch deleted file mode 100644 index 59177a95bc28..000000000000 --- a/sci-mathematics/octave/files/octave-3.2.4-fltk-1.3.patch +++ /dev/null @@ -1,32 +0,0 @@ -diff -urN octave-3.2.4/src/DLD-FUNCTIONS/fltk_backend.cc octave-3.2.4_new/src/DLD-FUNCTIONS/fltk_backend.cc ---- octave-3.2.4/src/DLD-FUNCTIONS/fltk_backend.cc 2009-05-25 10:05:00.000000000 +0400 -+++ octave-3.2.4_new/src/DLD-FUNCTIONS/fltk_backend.cc 2010-06-30 12:23:38.000000000 +0400 -@@ -40,6 +40,14 @@ - #include <sstream> - #include <iostream> - -+#include "cmd-edit.h" -+#include "defun-dld.h" -+#include "error.h" -+#include "gl-render.h" -+#include "graphics.h" -+#include "parse.h" -+#include "variables.h" -+ - #include <FL/Fl.H> - #include <FL/Fl_Window.H> - #include <FL/Fl_Output.H> -@@ -54,13 +62,6 @@ - #undef max - #endif - --#include "cmd-edit.h" --#include "defun-dld.h" --#include "error.h" --#include "gl-render.h" --#include "graphics.h" --#include "parse.h" --#include "variables.h" - - #define FLTK_BACKEND_NAME "fltk" - diff --git a/sci-mathematics/octave/files/octave-3.2.4-imshow.patch b/sci-mathematics/octave/files/octave-3.2.4-imshow.patch deleted file mode 100644 index 5b94e2589947..000000000000 --- a/sci-mathematics/octave/files/octave-3.2.4-imshow.patch +++ /dev/null @@ -1,27 +0,0 @@ -From: Rik <octave@nomad.inbox5.com> -Subject: Scale image point color according to colormap. - -Origin: upstream, http://hg.savannah.gnu.org/hgweb/octave/rev/bc4eb29e0cb4 -Bug: http://savannah.gnu.org/bugs/?29926 -Bug-Debian: http://bugs.debian.org/581998 - ---- a/scripts/image/imshow.m -+++ b/scripts/image/imshow.m -@@ -64,7 +64,6 @@ - - ## Get the image. - if (ischar (im)) -- ## Eventually, this should be imread. - [im, map] = imread (im); - indexed = true; - colormap (map); -@@ -163,7 +162,8 @@ - if (true_color || indexed) - tmp = image ([], [], im); - else -- tmp = image (round ((rows (colormap ()) - 1) * im)); -+ tmp = image (im); -+ set (tmp, "cdatamapping", "scaled"); - endif - set (gca (), "visible", "off"); - axis ("image"); diff --git a/sci-mathematics/octave/files/octave-3.2.4-interp2.patch b/sci-mathematics/octave/files/octave-3.2.4-interp2.patch deleted file mode 100644 index dae7db50ec7e..000000000000 --- a/sci-mathematics/octave/files/octave-3.2.4-interp2.patch +++ /dev/null @@ -1,160 +0,0 @@ -From: various upstream authors authors -Description: Implement bicubic interpolation correctly - This patch fixes a bug triggered by octave-image's test suite. - -Origin: upstream, http://hg.savannah.gnu.org/hgweb/octave/file/62bb59f927b1/scripts/general/interp2.m -Bug-Debian: http://bugs.debian.org/582276 - ---- a/scripts/general/interp2.m -+++ b/scripts/general/interp2.m -@@ -57,7 +57,7 @@ - ## @item 'linear' - ## Linear interpolation from nearest neighbors. - ## @item 'pchip' --## Piece-wise cubic hermite interpolating polynomial (not implemented yet). -+## Piece-wise cubic hermite interpolating polynomial. - ## @item 'cubic' - ## Cubic interpolation from four nearest neighbors. - ## @item 'spline' -@@ -218,18 +218,21 @@ - c = Z(2:zr, 1:(zc - 1)) - a; - d = Z(2:zr, 2:zc) - a - b - c; - -- idx = sub2ind (size (a), yidx, xidx); -- - ## scale XI, YI values to a 1-spaced grid -- Xsc = (XI - X(xidx)) ./ (X(xidx + 1) - X(xidx)); -- Ysc = (YI - Y(yidx)) ./ (Y(yidx + 1) - Y(yidx)); -+ Xsc = (XI - X(xidx)) ./ (diff (X)(xidx)); -+ Ysc = (YI - Y(yidx)) ./ (diff (Y)(yidx)); -+ -+ ## Get 2D index. -+ idx = sub2ind (size (a), yidx, xidx); -+ ## We can dispose of the 1D indices at this point to save memory. -+ clear xidx yidx - - ## apply plane equation - ZI = a(idx) + b(idx).*Xsc + c(idx).*Ysc + d(idx).*Xsc.*Ysc; - - elseif (strcmp (method, "nearest")) -- ii = (XI - X(xidx) > X(xidx + 1) - XI); -- jj = (YI - Y(yidx) > Y(yidx + 1) - YI); -+ ii = (XI - X(xidx) >= X(xidx + 1) - XI); -+ jj = (YI - Y(yidx) >= Y(yidx + 1) - YI); - idx = sub2ind (size (Z), yidx+jj, xidx+ii); - ZI = Z(idx); - -@@ -339,11 +342,64 @@ - - ## FIXME bicubic/__splinen__ don't handle arbitrary XI, YI - if (strcmp (method, "cubic")) -- ZI = bicubic (X, Y, Z, XI(1,:), YI(:,1), extrapval); -+ if (isgriddata (XI) && isgriddata (YI')) -+ ZI = bicubic (X, Y, Z, XI (1, :), YI (:, 1), extrapval); -+ elseif (isgriddata (X) && isgriddata (Y')) -+ ## Allocate output -+ ZI = zeros (size (X)); -+ -+ ## Find inliers -+ inside = !(XI < X (1) | XI > X (end) | YI < Y (1) | YI > Y (end)); -+ -+ ## Scale XI and YI to match indices of Z -+ XI = (columns (Z) - 1) * (XI - X (1)) / (X (end) - X (1)) + 1; -+ YI = (rows (Z) - 1) * (YI - Y (1)) / (Y (end) - Y (1)) + 1; -+ -+ ## Start the real work -+ K = floor (XI); -+ L = floor (YI); -+ -+ ## Coefficients -+ AY1 = bc ((YI - L + 1)); -+ AX1 = bc ((XI - K + 1)); -+ AY0 = bc ((YI - L + 0)); -+ AX0 = bc ((XI - K + 0)); -+ AY_1 = bc ((YI - L - 1)); -+ AX_1 = bc ((XI - K - 1)); -+ AY_2 = bc ((YI - L - 2)); -+ AX_2 = bc ((XI - K - 2)); -+ -+ ## Perform interpolation -+ sz = size(Z); -+ ZI = AY_2 .* AX_2 .* Z (sym_sub2ind (sz, L+2, K+2)) ... -+ + AY_2 .* AX_1 .* Z (sym_sub2ind (sz, L+2, K+1)) ... -+ + AY_2 .* AX0 .* Z (sym_sub2ind (sz, L+2, K)) ... -+ + AY_2 .* AX1 .* Z (sym_sub2ind (sz, L+2, K-1)) ... -+ + AY_1 .* AX_2 .* Z (sym_sub2ind (sz, L+1, K+2)) ... -+ + AY_1 .* AX_1 .* Z (sym_sub2ind (sz, L+1, K+1)) ... -+ + AY_1 .* AX0 .* Z (sym_sub2ind (sz, L+1, K)) ... -+ + AY_1 .* AX1 .* Z (sym_sub2ind (sz, L+1, K-1)) ... -+ + AY0 .* AX_2 .* Z (sym_sub2ind (sz, L, K+2)) ... -+ + AY0 .* AX_1 .* Z (sym_sub2ind (sz, L, K+1)) ... -+ + AY0 .* AX0 .* Z (sym_sub2ind (sz, L, K)) ... -+ + AY0 .* AX1 .* Z (sym_sub2ind (sz, L, K-1)) ... -+ + AY1 .* AX_2 .* Z (sym_sub2ind (sz, L-1, K+2)) ... -+ + AY1 .* AX_1 .* Z (sym_sub2ind (sz, L-1, K+1)) ... -+ + AY1 .* AX0 .* Z (sym_sub2ind (sz, L-1, K)) ... -+ + AY1 .* AX1 .* Z (sym_sub2ind (sz, L-1, K-1)); -+ ZI (!inside) = extrapval; -+ -+ else -+ error ("interp2: input data must have `meshgrid' format"); -+ endif - - elseif (strcmp (method, "spline")) -- ZI = __splinen__ ({Y(:,1).', X(1,:)}, Z, {YI(:,1), XI(1,:)}, extrapval, -+ if (isgriddata (XI) && isgriddata (YI')) -+ ZI = __splinen__ ({Y(:,1).', X(1,:)}, Z, {YI(:,1), XI(1,:)}, extrapval, - "spline"); -+ else -+ error ("interp2: input data must have `meshgrid' format"); -+ endif - else - error ("interpolation method not recognized"); - endif -@@ -351,6 +407,38 @@ - endif - endfunction - -+function b = isgriddata (X) -+ d1 = diff (X, 1, 1); -+ d2 = diff (X, 1, 2); -+ b = all (d1 (:) == 0) & all (d2 (:) == d2 (1)); -+endfunction -+ -+## Compute the bicubic interpolation coefficients -+function o = bc(x) -+ x = abs(x); -+ o = zeros(size(x)); -+ idx1 = (x < 1); -+ idx2 = !idx1 & (x < 2); -+ o(idx1) = 1 - 2.*x(idx1).^2 + x(idx1).^3; -+ o(idx2) = 4 - 8.*x(idx2) + 5.*x(idx2).^2 - x(idx2).^3; -+endfunction -+ -+## This version of sub2ind behaves as if the data was symmetrically padded -+function ind = sym_sub2ind(sz, Y, X) -+ Y (Y < 1) = 1 - Y (Y < 1); -+ while (any (Y (:) > 2 * sz (1))) -+ Y (Y > 2 * sz (1)) = round (Y (Y > 2 * sz (1)) / 2); -+ endwhile -+ Y (Y > sz (1)) = 1 + 2 * sz (1) - Y (Y > sz (1)); -+ X (X < 1) = 1 - X (X < 1); -+ while (any (X (:) > 2 * sz (2))) -+ X (X > 2 * sz (2)) = round (X (X > 2 * sz (2)) / 2); -+ endwhile -+ X (X > sz (2)) = 1 + 2 * sz (2) - X (X > sz (2)); -+ ind = sub2ind(sz, Y, X); -+endfunction -+ -+ - %!demo - %! A=[13,-1,12;5,4,3;1,6,2]; - %! x=[0,1,4]; y=[10,11,12]; -@@ -493,3 +581,7 @@ - %! assert(interp2(x,y,A,x,y,'linear'), A); - %! assert(interp2(x,y,A,x,y,'nearest'), A); - -+%!test % for Matlab-compatible rounding for 'nearest' -+%! X = meshgrid (1:4); -+%! assert (interp2 (X, 2.5, 2.5, 'nearest'), 3); -+ diff --git a/sci-mathematics/octave/files/octave-3.2.4-no-helvetica.patch b/sci-mathematics/octave/files/octave-3.2.4-no-helvetica.patch deleted file mode 100644 index 62297c9806f3..000000000000 --- a/sci-mathematics/octave/files/octave-3.2.4-no-helvetica.patch +++ /dev/null @@ -1,25 +0,0 @@ -Don't set Helvetica as default font, it's not available as TrueType -font. Fixes Bug#477688. - - -- Rafael Laboissiere <rafael@debian.org> Sat, 19 Jul 2008 10:27:26 +0200 - ---- a/scripts/plot/__go_draw_axes__.m -+++ b/scripts/plot/__go_draw_axes__.m -@@ -1751,7 +1751,7 @@ - - function [f, s, fnt, it, bld] = get_fontname_and_size (t) - if (isempty (t.fontname)) -- fnt = "Helvetica"; -+ fnt = "*"; - else - fnt = t.fontname; - endif -@@ -1789,7 +1789,7 @@ - if (strcmp (fld, "string")) - [f, s, fnt, it, bld] = get_fontname_and_size (obj); - else -- f = "Helvetica"; -+ f = "*"; - s = 10; - fnt = f; - it = false; diff --git a/sci-mathematics/octave/files/octave-3.2.4-normal-marker-size.patch b/sci-mathematics/octave/files/octave-3.2.4-normal-marker-size.patch deleted file mode 100644 index b263498b2afe..000000000000 --- a/sci-mathematics/octave/files/octave-3.2.4-normal-marker-size.patch +++ /dev/null @@ -1,25 +0,0 @@ -Revert the symbol markers in plots to their normal size. Thanks to -Francesco Potorti for the patch. - - -- Rafael Laboissiere <rafael@debian.org> Tue, 24 Feb 2009 11:40:01 +0100 - ---- a/scripts/plot/__go_draw_axes__.m -+++ b/scripts/plot/__go_draw_axes__.m -@@ -689,7 +689,7 @@ - usingclause{data_idx} = sprintf ("record=%d", numel (obj.xdata)); - - if (isfield (obj, "markersize")) -- mdat = obj.markersize / 3; -+ mdat = obj.markersize / 6; - endif - - if (isfield (obj, "edgecolor")) -@@ -1471,7 +1471,7 @@ - endif - - if (isfield (obj, "markersize")) -- fprintf (plot_stream, " pointsize %f", obj.markersize / 3); -+ fprintf (plot_stream, " pointsize %f", obj.markersize / 6); - found_style = true; - endif - else diff --git a/sci-mathematics/octave/files/octave-3.4.0-curl-headers.patch b/sci-mathematics/octave/files/octave-3.4.0-curl-headers.patch deleted file mode 100644 index b9e0ae6b51b7..000000000000 --- a/sci-mathematics/octave/files/octave-3.4.0-curl-headers.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff --git a/src/DLD-FUNCTIONS/urlwrite.cc b/src/DLD-FUNCTIONS/urlwrite.cc -index 83927b1..8c41d38 100644 ---- a/src/DLD-FUNCTIONS/urlwrite.cc -+++ b/src/DLD-FUNCTIONS/urlwrite.cc -@@ -52,7 +52,6 @@ along with Octave; see the file COPYING. If not, see - - #include <curl/curl.h> - #include <curl/curlver.h> --#include <curl/types.h> - #include <curl/easy.h> - - static int diff --git a/sci-mathematics/octave/files/octave-3.4.0-fftshift.patch b/sci-mathematics/octave/files/octave-3.4.0-fftshift.patch deleted file mode 100644 index bf163dede1d2..000000000000 --- a/sci-mathematics/octave/files/octave-3.4.0-fftshift.patch +++ /dev/null @@ -1,19 +0,0 @@ -Reference: http://hg.savannah.gnu.org/hgweb/octave/rev/189baf055143 - -diff -r e4dbfe3019b1 -r 189baf055143 scripts/signal/fftshift.m ---- a/scripts/signal/fftshift.m Sat Feb 19 18:21:58 2011 -0800 -+++ b/scripts/signal/fftshift.m Sun Feb 20 17:53:41 2011 -0800 -@@ -65,9 +65,9 @@ - retval = x(idx{:}); - else - if (isvector (x)) -- x = length (x); -- xx = ceil (x/2); -- retval = x([xx+1:x, 1:xx]); -+ xl = length (x); -+ xx = ceil (xl/2); -+ retval = x([xx+1:xl, 1:xx]); - elseif (ismatrix (x)) - nd = ndims (x); - sz = size (x); - diff --git a/sci-mathematics/octave/files/octave-3.4.0-fltk.patch b/sci-mathematics/octave/files/octave-3.4.0-fltk.patch deleted file mode 100644 index eff3642542c6..000000000000 --- a/sci-mathematics/octave/files/octave-3.4.0-fltk.patch +++ /dev/null @@ -1,24 +0,0 @@ -diff -up octave-3.4.0/src/DLD-FUNCTIONS/__fltk_uigetfile__.cc.fltk octave-3.4.0/src/DLD-FUNCTIONS/__fltk_uigetfile__.cc ---- octave-3.4.0/src/DLD-FUNCTIONS/__fltk_uigetfile__.cc.fltk 2011-02-08 03:00:52.000000000 -0700 -+++ octave-3.4.0/src/DLD-FUNCTIONS/__fltk_uigetfile__.cc 2011-05-26 14:09:51.277484258 -0600 -@@ -27,7 +27,7 @@ along with Octave; see the file COPYING. - #if defined (HAVE_FLTK) - - #include <FL/Fl.H> --#include <Fl/Fl_File_Chooser.H> -+#include <FL/Fl_File_Chooser.H> - - // FLTK headers may include X11/X.h which defines Complex, and that - // conflicts with Octave's Complex typedef. We don't need the X11 -diff -up octave-3.4.0/src/DLD-FUNCTIONS/__init_fltk__.cc.fltk octave-3.4.0/src/DLD-FUNCTIONS/__init_fltk__.cc ---- octave-3.4.0/src/DLD-FUNCTIONS/__init_fltk__.cc.fltk 2011-05-26 14:10:40.447667595 -0600 -+++ octave-3.4.0/src/DLD-FUNCTIONS/__init_fltk__.cc 2011-05-26 14:10:14.456627808 -0600 -@@ -44,7 +44,7 @@ To initialize: - #include <FL/Fl_Box.H> - #include <FL/Fl_Button.H> - #include <FL/Fl_Choice.H> --#include <Fl/Fl_File_Chooser.H> -+#include <FL/Fl_File_Chooser.H> - #include <FL/Fl_Gl_Window.H> - #include <FL/Fl_Menu_Bar.H> - #include <FL/Fl_Menu_Button.H> diff --git a/sci-mathematics/octave/files/octave-3.4.0-gcc46.patch b/sci-mathematics/octave/files/octave-3.4.0-gcc46.patch deleted file mode 100644 index c174204acedb..000000000000 --- a/sci-mathematics/octave/files/octave-3.4.0-gcc46.patch +++ /dev/null @@ -1,24 +0,0 @@ -diff -up octave-3.4.0/liboctave/oct-alloc.h.gcc46 octave-3.4.0/liboctave/oct-alloc.h ---- octave-3.4.0/liboctave/oct-alloc.h.gcc46 2011-02-08 03:00:51.000000000 -0700 -+++ octave-3.4.0/liboctave/oct-alloc.h 2011-02-08 09:41:23.984081687 -0700 -@@ -23,6 +23,8 @@ along with Octave; see the file COPYING. - #if !defined (octave_oct_alloc_h) - #define octave_oct_alloc_h 1 - -+#include <cstddef> -+ - class - OCTAVE_API - octave_allocator -diff -up octave-3.4.0/src/pr-output.cc.gcc46 octave-3.4.0/src/pr-output.cc ---- octave-3.4.0/src/pr-output.cc.gcc46 2011-02-08 03:00:52.000000000 -0700 -+++ octave-3.4.0/src/pr-output.cc 2011-02-08 09:55:16.149662744 -0700 -@@ -3024,7 +3024,7 @@ abs (T x) - } - - #define INSTANTIATE_ABS(T) \ -- template /* static */ inline T abs (T) -+ template /* static */ T abs (T) - - INSTANTIATE_ABS(signed char); - INSTANTIATE_ABS(short); diff --git a/sci-mathematics/octave/files/octave-3.4.3-help.patch b/sci-mathematics/octave/files/octave-3.4.3-help.patch new file mode 100644 index 000000000000..c0e693abc4a2 --- /dev/null +++ b/sci-mathematics/octave/files/octave-3.4.3-help.patch @@ -0,0 +1,13 @@ +Help parallel compilation +patch by Sebastien Fabbro +--- scripts/Makefile.am.orig 2011-06-09 22:27:22.688268651 +0100 ++++ scripts/Makefile.am 2011-02-08 10:00:51.000000000 +0000 +@@ -316,7 +316,7 @@ + + gethelp_SOURCES = gethelp.cc + +-.DOCSTRINGS: $(FCN_FILES) $(GEN_FCN_FILES) mkdoc $(gethelp_SOURCES) Makefile ++.DOCSTRINGS: $(FCN_FILES) $(GEN_FCN_FILES) mkdoc $(gethelp_SOURCES) Makefile gethelp + @$(MAKE) $(AM_MAKEFLAGS) gethelp$(BUILD_EXEEXT) + if [ "x$(srcdir)" != "x." ] && [ -f $(srcdir)/DOCSTRINGS ] && [ ! -f DOCSTRINGS ]; then \ + cp $(srcdir)/DOCSTRINGS DOCSTRINGS; \ diff --git a/sci-mathematics/octave/files/octave-3.4.3-pkgbuilddir.patch b/sci-mathematics/octave/files/octave-3.4.3-pkgbuilddir.patch new file mode 100644 index 000000000000..895fa4932a12 --- /dev/null +++ b/sci-mathematics/octave/files/octave-3.4.3-pkgbuilddir.patch @@ -0,0 +1,41 @@ +--- scripts/pkg/pkg.m.orig 2011-02-08 03:00:51.000000000 -0700 ++++ scripts/pkg/pkg.m 2011-03-18 09:31:24.670165643 -0600 +@@ -644,7 +644,14 @@ + for i = 1:length (files) + tgz = files{i}; + +- if (exist (tgz, "file")) ++ ## The filename pointed to an uncompressed package to begin with. ++ if (exist (tgz, "dir")) ++ if (tgz(1) == '/') ++ packdir = tgz; ++ else ++ packdir = fullfile (pwd(), tgz); ++ endif ++ elseif (exist (tgz, "file")) + ## Create a temporary directory. + tmpdir = tmpnam (); + tmpdirs{end+1} = tmpdir; +@@ -671,20 +678,12 @@ + if (length (dirlist) > 3) + error ("bundles of packages are not allowed"); + endif +- endif + +- ## The filename pointed to an uncompressed package to begin with. +- if (exist (tgz, "dir")) +- dirlist = {".", "..", tgz}; ++ ## The two first entries of dirlist are "." and "..". ++ packdir = fullfile (tmpdir, dirlist{3}); + endif + + if (exist (tgz, "file") || exist (tgz, "dir")) +- ## The two first entries of dirlist are "." and "..". +- if (exist (tgz, "file")) +- packdir = fullfile (tmpdir, dirlist{3}); +- else +- packdir = fullfile (pwd(), dirlist{3}); +- endif + packdirs{end+1} = packdir; + + ## Make sure the package contains necessary files. diff --git a/sci-mathematics/octave/octave-3.4.3-r1.ebuild b/sci-mathematics/octave/octave-3.4.3-r1.ebuild index 559671233f4b..906d5112fad0 100644 --- a/sci-mathematics/octave/octave-3.4.3-r1.ebuild +++ b/sci-mathematics/octave/octave-3.4.3-r1.ebuild @@ -1,9 +1,9 @@ # Copyright 1999-2012 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/octave/octave-3.4.3-r1.ebuild,v 1.2 2012/01/17 17:17:12 xarthisius Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/octave/octave-3.4.3-r1.ebuild,v 1.3 2012/01/19 15:06:57 bicatali Exp $ EAPI=4 -inherit eutils base autotools +inherit eutils base autotools toolchain-funcs DESCRIPTION="High-level interactive language for numerical computations" LICENSE="GPL-3" @@ -11,7 +11,8 @@ HOMEPAGE="http://www.octave.org/" SRC_URI="ftp://ftp.gnu.org/pub/gnu/${PN}/${P}.tar.bz2" SLOT="0" -IUSE="curl doc fftw +glpk +imagemagick opengl +qhull +qrupdate readline +sparse X zlib" +IUSE="curl doc fftw +glpk +imagemagick opengl openmp +qhull +qrupdate + readline +sparse static-libs X zlib" KEYWORDS="~alpha ~amd64 ~hppa ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux" RDEPEND="dev-libs/libpcre @@ -45,15 +46,30 @@ DEPEND="${RDEPEND} virtual/latex-base dev-texlive/texlive-genericrecommended sys-apps/texinfo ) + dev-util/gperf dev-util/pkgconfig" +pkg_pretend() { + use openmp && [[ $(tc-getCC)$ == *gcc* ]] && ! tc-has-openmp && \ + die "You have openmp enabled but your current gcc does not support it" +} + src_prepare() { - epatch "${FILESDIR}"/${PN}-3.4.0-{pkgbuilddir,help}.patch + epatch "${FILESDIR}"/${P}-{pkgbuilddir,help}.patch eautoreconf } src_configure() { # hdf5 disabled because not really useful (bug #299876) + local myconf="--without-magick" + if use imagemagick; then + if has_version media-gfx/graphicsmagick[cxx]; then + myconf="--with-magick=GraphicsMagick" + else + myconf="--with-magick=ImageMagick" + fi + fi + econf \ --localstatedir="${EPREFIX}/var/state/octave" \ --enable-shared \ @@ -66,7 +82,6 @@ src_configure() { $(use_with fftw fftw3) \ $(use_with fftw fftw3f) \ $(use_with glpk) \ - $(use_with imagemagick magick) \ $(use_with opengl) \ $(use_with qhull) \ $(use_with qrupdate) \ @@ -76,7 +91,8 @@ src_configure() { $(use_with sparse cholmod) \ $(use_with sparse cxsparse) \ $(use_with X x) \ - $(use_with zlib z) + $(use_with zlib z) \ + ${myconf} } src_install() { diff --git a/sci-mathematics/octave/octave-3.6.0.ebuild b/sci-mathematics/octave/octave-3.6.0.ebuild new file mode 100644 index 000000000000..767cbdf28dba --- /dev/null +++ b/sci-mathematics/octave/octave-3.6.0.ebuild @@ -0,0 +1,108 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-mathematics/octave/octave-3.6.0.ebuild,v 1.1 2012/01/19 15:06:57 bicatali Exp $ + +EAPI=4 + +AUTOTOOLS_AUTORECONF=yes +inherit autotools-utils toolchain-funcs + +DESCRIPTION="High-level interactive language for numerical computations" +LICENSE="GPL-3" +HOMEPAGE="http://www.octave.org/" +SRC_URI="ftp://ftp.gnu.org/pub/gnu/${PN}/${P}.tar.bz2" + +SLOT="0" +IUSE="curl doc fftw +glpk +imagemagick opengl openmp +qhull +qrupdate + readline +sparse static-libs X zlib" +KEYWORDS="~alpha ~amd64 ~hppa ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux" + +RDEPEND="dev-libs/libpcre + app-text/ghostscript-gpl + sys-libs/ncurses + virtual/lapack + curl? ( net-misc/curl ) + fftw? ( sci-libs/fftw:3.0 ) + glpk? ( sci-mathematics/glpk ) + imagemagick? ( || ( + media-gfx/graphicsmagick[cxx] + media-gfx/imagemagick[cxx] ) ) + opengl? ( + media-libs/freetype:2 + media-libs/fontconfig + >=x11-libs/fltk-1.3:1[opengl] ) + qhull? ( media-libs/qhull ) + qrupdate? ( sci-libs/qrupdate ) + sparse? ( + sci-libs/arpack + sci-libs/camd + sci-libs/ccolamd + sci-libs/cholmod + sci-libs/colamd + sci-libs/cxsparse + sci-libs/umfpack ) + X? ( x11-libs/libX11 ) + zlib? ( sys-libs/zlib )" + +DEPEND="${RDEPEND} + doc? ( + virtual/latex-base + dev-texlive/texlive-genericrecommended + sys-apps/texinfo ) + dev-util/gperf + dev-util/pkgconfig" + +PATCHES=( "${FILESDIR}"/${PN}-3.4.3-{pkgbuilddir,help}.patch ) + +pkg_pretend() { + use openmp && [[ $(tc-getCC)$ == *gcc* ]] && ! tc-has-openmp && \ + die "You have openmp enabled but your current gcc does not support it" +} + +src_configure() { + # hdf5 disabled because not really useful (bug #299876) + local myconf="--without-magick" + if use imagemagick; then + if has_version media-gfx/graphicsmagick[cxx]; then + myconf="--with-magick=GraphicsMagick" + else + myconf="--with-magick=ImageMagick" + fi + fi + + myeconfargs+=( + --localstatedir="${EPREFIX}/var/state/octave" + --disable-rpath + --without-hdf5 + --with-blas="$(pkg-config --libs blas)" + --with-lapack="$(pkg-config --libs lapack)" + $(use_enable doc docs) + $(use_enable openmp) + $(use_enable readline) + $(use_with curl) + $(use_with fftw fftw3) + $(use_with fftw fftw3f) + $(use_with glpk) + $(use_with opengl) + $(use_with qhull) + $(use_with qrupdate) + $(use_with sparse arpack) + $(use_with sparse umfpack) + $(use_with sparse colamd) + $(use_with sparse ccolamd) + $(use_with sparse cholmod) + $(use_with sparse cxsparse) + $(use_with X x) + $(use_with zlib z) + ${myconf} + ) + autotools-utils_src_configure +} + +src_install() { + autotools-utils_src_install + use doc && dodoc $(find doc -name \*.pdf) + [[ -e test/fntests.log ]] && dodoc test/fntests.log + echo "LDPATH=${EPREFIX}/usr/$(get_libdir)/${P}" > 99octave + doenvd 99octave +} |