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| author |   Andrey Kislyuk <weaver@gentoo.org> | 2009-02-26 22:11:27 +0000 |
|---|---|---|
| committer | Andrey Kislyuk <weaver@gentoo.org> | 2009-02-26 22:11:27 +0000 |
| commit | 34131341531cb4fa32dceeba7a1374f4970978cd (patch) | |
| tree | 9913fed842c1aeff5e93fd3c928c35ad580e2383 /sci-biology | |
| parent | Adding support for 802.11n and removing stable flags from 0.6.7, since (diff) | |
| download | gentoo-2-34131341531cb4fa32dceeba7a1374f4970978cd.tar.gz gentoo-2-34131341531cb4fa32dceeba7a1374f4970978cd.tar.bz2 gentoo-2-34131341531cb4fa32dceeba7a1374f4970978cd.zip | |
New package sci-biology/bwa
(Portage version: 2.2_rc20/cvs/Linux 2.6.26-gentoo-r4 x86_64)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/bwa/ChangeLog | 10 | ||||
| -rw-r--r-- | sci-biology/bwa/bwa-0.4.5.ebuild | 26 | ||||
| -rw-r--r-- | sci-biology/bwa/metadata.xml | 9 |
3 files changed, 45 insertions, 0 deletions
diff --git a/sci-biology/bwa/ChangeLog b/sci-biology/bwa/ChangeLog new file mode 100644 index 000000000000..c9672024fce0 --- /dev/null +++ b/sci-biology/bwa/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/bwa +# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.1 2009/02/26 22:11:27 weaver Exp $ + +*bwa-0.4.5 (26 Feb 2009) + + 26 Feb 2009; Andrey Kislyuk <weaver@gentoo.org> +metadata.xml, + +bwa-0.4.5.ebuild: + New package, ebuild written by me. + diff --git a/sci-biology/bwa/bwa-0.4.5.ebuild b/sci-biology/bwa/bwa-0.4.5.ebuild new file mode 100644 index 000000000000..f9ba31046a8e --- /dev/null +++ b/sci-biology/bwa/bwa-0.4.5.ebuild @@ -0,0 +1,26 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/bwa-0.4.5.ebuild,v 1.1 2009/02/26 22:11:27 weaver Exp $ + +DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner" +HOMEPAGE="http://maq.sourceforge.net/" +SRC_URI="mirror://sourceforge/maq/${P}.tar.bz2" + +LICENSE="GPL-3" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="" + +src_unpack() { + unpack ${A} + sed -i 's/^CFLAGS=/CFLAGS+=/' "${S}/Makefile" +} + +src_install() { + dobin bwa || die + doman bwa.1 || die + dodoc ChangeLog NEWS +} diff --git a/sci-biology/bwa/metadata.xml b/sci-biology/bwa/metadata.xml new file mode 100644 index 000000000000..3302123e5718 --- /dev/null +++ b/sci-biology/bwa/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> + <herd>sci-biology</herd> +</pkgmetadata> |