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| author |   Olivier Fisette <ribosome@gentoo.org> | 2007-03-10 03:34:18 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2007-03-10 03:34:18 +0000 |
| commit | ad9c64f663e0ddb89eb85970c0a61679f845b0f1 (patch) | |
| tree | 720d94d8a2ea7e1d198dbe97f2556a8da3979e21 /sci-biology/ncbi-tools | |
| parent | Fix desktop entry to not include an invalid char, thanks to Mohamed M. Hagag ... (diff) | |
| download | gentoo-2-ad9c64f663e0ddb89eb85970c0a61679f845b0f1.tar.gz gentoo-2-ad9c64f663e0ddb89eb85970c0a61679f845b0f1.tar.bz2 gentoo-2-ad9c64f663e0ddb89eb85970c0a61679f845b0f1.zip | |
Added missing patch (bug #170202).
(Portage version: 2.1.2.2)
Diffstat (limited to 'sci-biology/ncbi-tools')
| -rw-r--r-- | sci-biology/ncbi-tools/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/ncbi-tools/files/ncbi-tools-extra_vib.patch | 37 |
2 files changed, 43 insertions, 1 deletions
diff --git a/sci-biology/ncbi-tools/ChangeLog b/sci-biology/ncbi-tools/ChangeLog index bf9b0254c9f7..1a953a9f0eab 100644 --- a/sci-biology/ncbi-tools/ChangeLog +++ b/sci-biology/ncbi-tools/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/ncbi-tools # Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.51 2007/03/09 03:55:37 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.52 2007/03/10 03:34:18 ribosome Exp $ + + 10 Mar 2007; Olivier Fisette <ribosome@gentoo.org> + +files/ncbi-tools-extra_vib.patch: + Added missing patch. Thanks to Walter Meinl <wuno@lsvw.de> for reporting + (bug #170202). *ncbi-tools-20061015-r1 (09 Mar 2007) diff --git a/sci-biology/ncbi-tools/files/ncbi-tools-extra_vib.patch b/sci-biology/ncbi-tools/files/ncbi-tools-extra_vib.patch new file mode 100644 index 000000000000..cb7d1adf9208 --- /dev/null +++ b/sci-biology/ncbi-tools/files/ncbi-tools-extra_vib.patch @@ -0,0 +1,37 @@ +--- ncbi-20061015/make/makedis.csh 2006-09-14 17:37:03.000000000 +0200 ++++ ncbi/make/makedis.csh 2007-03-07 21:00:36.090836460 +0100 +@@ -485,6 +485,34 @@ + + set net_stat = $status + ++if ( $net_stat == 0 ) then ++ # Compile additional tools, usually hidden ++ if ( ! $?EXTRA_VIB ) then ++ set EXTRA_VIB = ( asn2all ) ++ endif ++ ++ if ("$?NCBI_MT_OTHERLIBS" == "1") then ++ set CMD='make $MFLG -f makenet.unx \ ++ CFLAGS1=\"$NCBI_OPTFLAG $NCBI_CFLAGS1 $OGL_INCLUDE\" \ ++ LDFLAGS1=\"$NCBI_LDFLAGS1\" SHELL=\"$NCBI_MAKE_SHELL\" \ ++ AR=\"$NCBI_AR\" CC=\"$NCBI_CC\" RAN=\"$NCBI_RANLIB\" OTHERLIBS=\"$NCBI_OTHERLIBS\" \ ++ THREAD_OBJ=$NCBI_THREAD_OBJ \ ++ THREAD_OTHERLIBS=\"$NCBI_MT_OTHERLIBS\" \ ++ NETENTREZVERSION=\"$NETENTREZVERSION\" $NET_VIB $EXTRA_VIB' ++ else ++ set CMD='make $MFLG -f makenet.unx \ ++ CFLAGS1=\"$NCBI_OPTFLAG $NCBI_CFLAGS1 $OGL_INCLUDE\" \ ++ LDFLAGS1=\"$NCBI_LDFLAGS1\" SHELL=\"$NCBI_MAKE_SHELL\" \ ++ AR=\"$NCBI_AR\" CC=\"$NCBI_CC\" RAN=\"$NCBI_RANLIB\" OTHERLIBS=\"$NCBI_OTHERLIBS\" \ ++ NETENTREZVERSION=\"$NETENTREZVERSION\" $NET_VIB $EXTRA_VIB' ++ endif ++ eval echo $CMD ++ eval echo $CMD | sh ++ ++ set net_stat = $status ++ ++endif ++ + if ($make_stat != 0 || $demo_stat != 0 || $threaded_demo_stat != 0 || $net_stat != 0) then + echo FAILURE primary make status = $make_stat, demo = $demo_stat, threaded_demo = $threaded_demo_stat, net = $net_stat + cat <<EOF |