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Diffstat (limited to 'sci-libs/parmetis/files/parmetis-3.1.1-autotools.patch')
| -rw-r--r-- | sci-libs/parmetis/files/parmetis-3.1.1-autotools.patch | 298 |
1 files changed, 298 insertions, 0 deletions
diff --git a/sci-libs/parmetis/files/parmetis-3.1.1-autotools.patch b/sci-libs/parmetis/files/parmetis-3.1.1-autotools.patch new file mode 100644 index 000000000000..d38a2f7575cf --- /dev/null +++ b/sci-libs/parmetis/files/parmetis-3.1.1-autotools.patch @@ -0,0 +1,298 @@ +--- configure.ac 1970-01-01 01:00:00.000000000 +0100 ++++ configure.ac 2009-03-14 11:37:58.804041439 +0000 +@@ -0,0 +1,18 @@ ++# -*- Autoconf -*- ++AC_PREREQ(2.59) ++AC_INIT(parmetis, 3.1.1, karypis@cs.umn.edu) ++AM_INIT_AUTOMAKE([foreign]) ++AC_CONFIG_HEADER([config.h]) ++AC_PROG_INSTALL ++AC_PROG_LIBTOOL ++AC_CHECK_LIB(m, sqrt) ++sinclude(ax_mpi.m4) ++AC_LANG_PUSH([C]) ++AX_MPI([], AC_MSG_ERROR([could not compile an mpi test program])) ++AC_CONFIG_FILES([Makefile ++ metis.pc ++ parmetis.pc ++ ParMETISLib/Makefile ++ METISLib/Makefile ++ Programs/Makefile]) ++AC_OUTPUT +--- Makefile.am 1970-01-01 01:00:00.000000000 +0100 ++++ Makefile.am 2009-03-14 11:37:15.700900498 +0000 +@@ -0,0 +1,5 @@ ++SUBDIRS = METISLib ParMETISLib Programs ++EXTRA_DIST = CHANGES VERSION parmetis.pc.in metis.pc.in ++include_HEADERS = parmetis.h ++pkgconfigdir = $(libdir)/pkgconfig ++pkgconfig_DATA = metis.pc parmetis.pc +--- METISLib/Makefile.am 1970-01-01 01:00:00.000000000 +0100 ++++ METISLib/Makefile.am 2009-03-14 11:37:15.700900498 +0000 +@@ -0,0 +1,18 @@ ++pkginclude_HEADERS = defs.h macros.h metis.h proto.h rename.h \ ++ stdheaders.h struct.h ++pkgincludedir = $(includedir)/metis ++ ++lib_LTLIBRARIES = libmetis.la ++libmetis_la_SOURCES = \ ++ coarsen.c fm.c initpart.c match.c ccgraph.c \ ++ pmetis.c pqueue.c refine.c util.c timing.c debug.c \ ++ bucketsort.c graph.c stat.c kmetis.c kwayrefine.c \ ++ kwayfm.c balance.c ometis.c srefine.c sfm.c separator.c \ ++ mincover.c mmd.c mesh.c meshpart.c frename.c fortran.c \ ++ myqsort.c compress.c parmetis.c estmem.c \ ++ mpmetis.c mcoarsen.c mmatch.c minitpart.c mbalance.c \ ++ mutil.c mkmetis.c mkwayrefine.c mkwayfmh.c \ ++ mrefine2.c minitpart2.c mbalance2.c mfm2.c \ ++ kvmetis.c kwayvolrefine.c kwayvolfm.c subdomains.c \ ++ mfm.c memory.c mrefine.c checkgraph.c ++libmetis_la_LDFLAGS = -no-undefined -version-info 4:1:0 +--- metis.pc.in 1970-01-01 01:00:00.000000000 +0100 ++++ metis.pc.in 2009-03-14 11:37:15.700900498 +0000 +@@ -0,0 +1,10 @@ ++prefix=@prefix@ ++exec_prefix=@exec_prefix@ ++libdir=@libdir@ ++includedir=@includedir@ ++ ++Name: METIS ++Description: Software for unstructured graph partitioning ++Version: @VERSION@ ++Libs: -L${libdir} -lmetis ++Cflags: -I${includedir}/metis +--- ParMETISLib/Makefile.am 1970-01-01 01:00:00.000000000 +0100 ++++ ParMETISLib/Makefile.am 2009-03-14 11:57:08.006017954 +0000 +@@ -0,0 +1,21 @@ ++pkginclude_HEADERS = defs.h macros.h parmetislib.h proto.h \ ++ rename.h stdheaders.h struct.h ++pkgincludedir = $(includedir)/parmetis ++ ++lib_LTLIBRARIES = libparmetis.la ++libparmetis_la_SOURCES = \ ++ comm.c util.c debug.c setup.c grsetup.c timer.c \ ++ node_refine.c initmsection.c order.c \ ++ xyzpart.c pspases.c frename.c \ ++ iintsort.c iidxsort.c ikeysort.c ikeyvalsort.c \ ++ kmetis.c gkmetis.c ometis.c \ ++ initpart.c match.c \ ++ kwayfm.c kwayrefine.c kwaybalance.c \ ++ remap.c stat.c fpqueue.c \ ++ ametis.c rmetis.c lmatch.c initbalance.c \ ++ mdiffusion.c diffutil.c wave.c \ ++ csrmatch.c redomylink.c balancemylink.c \ ++ selectq.c akwayfm.c serial.c move.c \ ++ mmetis.c mesh.c memory.c weird.c backcompat.c ++libparmetis_la_LDFLAGS = -no-undefined -version-info 3:1:1 ++libparmetis_la_LIBADD = @MPILIBS@ $(top_builddir)/METISLib/libmetis.la +--- parmetis.pc.in 1970-01-01 01:00:00.000000000 +0100 ++++ parmetis.pc.in 2009-03-14 11:37:15.700900498 +0000 +@@ -0,0 +1,11 @@ ++prefix=@prefix@ ++exec_prefix=@exec_prefix@ ++libdir=@libdir@ ++includedir=@includedir@ ++ ++Name: ParMETIS ++Description: Software for parallel (mpi) unstructured graph partitioning ++Version: @VERSION@ ++Requires: metis ++Libs: -L${libdir} -lparmetis ++Cflags: -I${includedir} +--- Programs/Makefile.am 1970-01-01 01:00:00.000000000 +0100 ++++ Programs/Makefile.am 2009-03-14 11:37:15.700900498 +0000 +@@ -0,0 +1,13 @@ ++AM_CPPFLAGS = -I$(top_srcdir)/ParMETISLib ++LDADD = $(top_builddir)/METISLib/libmetis.la \ ++ $(top_builddir)/ParMETISLib/libparmetis.la ++ ++check_PROGRAMS = ptest mtest ++ptest_SOURCES = ptest.c io.c adaptgraph.c ++mtest_SOURCES = mtest.c io.c ++ ++MPIRUN = mpirun -np 2 ++ ++check-local: $(check_PROGRAMS) ++ $(MPIRUN) ptest ../Graphs/rotor.graph ++ $(MPIRUN) mtest ../Graphs/bricks.hex3d 2 +--- ax_mpi.m4 1970-01-01 01:00:00.000000000 +0100 ++++ ax_mpi.m4 2010-01-20 20:33:15.000000000 +0000 +@@ -0,0 +1,178 @@ ++# =========================================================================== ++# http://www.nongnu.org/autoconf-archive/ax_mpi.html ++# =========================================================================== ++# ++# SYNOPSIS ++# ++# AX_MPI([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]]) ++# ++# DESCRIPTION ++# ++# This macro tries to find out how to compile programs that use MPI ++# (Message Passing Interface), a standard API for parallel process ++# communication (see http://www-unix.mcs.anl.gov/mpi/) ++# ++# On success, it sets the MPICC, MPICXX, MPIF77, or MPIFC output variable ++# to the name of the MPI compiler, depending upon the current language. ++# (This may just be $CC/$CXX/$F77/$FC, but is more often something like ++# mpicc/mpiCC/mpif77/mpif90.) It also sets MPILIBS to any libraries that ++# are needed for linking MPI (e.g. -lmpi or -lfmpi, if a special ++# MPICC/MPICXX/MPIF77/MPIFC was not found). ++# ++# If you want to compile everything with MPI, you should set: ++# ++# CC="MPICC" #OR# CXX="MPICXX" #OR# F77="MPIF77" #OR# FC="MPIFC" ++# LIBS="$MPILIBS $LIBS" ++# ++# NOTE: The above assumes that you will use $CC (or whatever) for linking ++# as well as for compiling. (This is the default for automake and most ++# Makefiles.) ++# ++# The user can force a particular library/compiler by setting the ++# MPICC/MPICXX/MPIF77/MPIFC and/or MPILIBS environment variables. ++# ++# ACTION-IF-FOUND is a list of shell commands to run if an MPI library is ++# found, and ACTION-IF-NOT-FOUND is a list of commands to run if it is not ++# found. If ACTION-IF-FOUND is not specified, the default action will ++# define HAVE_MPI. ++# ++# LICENSE ++# ++# Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu> ++# Copyright (c) 2008 Julian C. Cummings <cummings@cacr.caltech.edu> ++# ++# This program is free software: you can redistribute it and/or modify it ++# under the terms of the GNU General Public License as published by the ++# Free Software Foundation, either version 3 of the License, or (at your ++# option) any later version. ++# ++# This program is distributed in the hope that it will be useful, but ++# WITHOUT ANY WARRANTY; without even the implied warranty of ++# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General ++# Public License for more details. ++# ++# You should have received a copy of the GNU General Public License along ++# with this program. If not, see <http://www.gnu.org/licenses/>. ++# ++# As a special exception, the respective Autoconf Macro's copyright owner ++# gives unlimited permission to copy, distribute and modify the configure ++# scripts that are the output of Autoconf when processing the Macro. You ++# need not follow the terms of the GNU General Public License when using ++# or distributing such scripts, even though portions of the text of the ++# Macro appear in them. The GNU General Public License (GPL) does govern ++# all other use of the material that constitutes the Autoconf Macro. ++# ++# This special exception to the GPL applies to versions of the Autoconf ++# Macro released by the Autoconf Archive. When you make and distribute a ++# modified version of the Autoconf Macro, you may extend this special ++# exception to the GPL to apply to your modified version as well. ++ ++AU_ALIAS([ACX_MPI], [AX_MPI]) ++AC_DEFUN([AX_MPI], [ ++AC_PREREQ(2.50) dnl for AC_LANG_CASE ++ ++AC_LANG_CASE([C], [ ++ AC_REQUIRE([AC_PROG_CC]) ++ AC_ARG_VAR(MPICC,[MPI C compiler command]) ++ AC_CHECK_PROGS(MPICC, mpicc hcc mpxlc_r mpxlc mpcc cmpicc, $CC) ++ ax_mpi_save_CC="$CC" ++ CC="$MPICC" ++ AC_SUBST(MPICC) ++], ++[C++], [ ++ AC_REQUIRE([AC_PROG_CXX]) ++ AC_ARG_VAR(MPICXX,[MPI C++ compiler command]) ++ AC_CHECK_PROGS(MPICXX, mpic++ mpicxx mpiCC hcp mpxlC_r mpxlC mpCC cmpic++, $CXX) ++ ax_mpi_save_CXX="$CXX" ++ CXX="$MPICXX" ++ AC_SUBST(MPICXX) ++], ++[Fortran 77], [ ++ AC_REQUIRE([AC_PROG_F77]) ++ AC_ARG_VAR(MPIF77,[MPI Fortran 77 compiler command]) ++ AC_CHECK_PROGS(MPIF77, mpif77 hf77 mpxlf_r mpxlf mpf77 cmpifc, $F77) ++ ax_mpi_save_F77="$F77" ++ F77="$MPIF77" ++ AC_SUBST(MPIF77) ++], ++[Fortran], [ ++ AC_REQUIRE([AC_PROG_FC]) ++ AC_ARG_VAR(MPIFC,[MPI Fortran compiler command]) ++ AC_CHECK_PROGS(MPIFC, mpif90 mpxlf95_r mpxlf90_r mpxlf95 mpxlf90 mpf90 cmpif90c, $FC) ++ ax_mpi_save_FC="$FC" ++ FC="$MPIFC" ++ AC_SUBST(MPIFC) ++]) ++ ++if test x = x"$MPILIBS"; then ++ AC_LANG_CASE([C], [AC_CHECK_FUNC(MPI_Init, [MPILIBS=" "])], ++ [C++], [AC_CHECK_FUNC(MPI_Init, [MPILIBS=" "])], ++ [Fortran 77], [AC_MSG_CHECKING([for MPI_Init]) ++ AC_LINK_IFELSE([AC_LANG_PROGRAM([],[ call MPI_Init])],[MPILIBS=" " ++ AC_MSG_RESULT(yes)], [AC_MSG_RESULT(no)])], ++ [Fortran], [AC_MSG_CHECKING([for MPI_Init]) ++ AC_LINK_IFELSE([AC_LANG_PROGRAM([],[ call MPI_Init])],[MPILIBS=" " ++ AC_MSG_RESULT(yes)], [AC_MSG_RESULT(no)])]) ++fi ++AC_LANG_CASE([Fortran 77], [ ++ if test x = x"$MPILIBS"; then ++ AC_CHECK_LIB(fmpi, MPI_Init, [MPILIBS="-lfmpi"]) ++ fi ++ if test x = x"$MPILIBS"; then ++ AC_CHECK_LIB(fmpich, MPI_Init, [MPILIBS="-lfmpich"]) ++ fi ++], ++[Fortran], [ ++ if test x = x"$MPILIBS"; then ++ AC_CHECK_LIB(fmpi, MPI_Init, [MPILIBS="-lfmpi"]) ++ fi ++ if test x = x"$MPILIBS"; then ++ AC_CHECK_LIB(mpichf90, MPI_Init, [MPILIBS="-lmpichf90"]) ++ fi ++]) ++if test x = x"$MPILIBS"; then ++ AC_CHECK_LIB(mpi, MPI_Init, [MPILIBS="-lmpi"]) ++fi ++if test x = x"$MPILIBS"; then ++ AC_CHECK_LIB(mpich, MPI_Init, [MPILIBS="-lmpich"]) ++fi ++ ++dnl We have to use AC_TRY_COMPILE and not AC_CHECK_HEADER because the ++dnl latter uses $CPP, not $CC (which may be mpicc). ++AC_LANG_CASE([C], [if test x != x"$MPILIBS"; then ++ AC_MSG_CHECKING([for mpi.h]) ++ AC_TRY_COMPILE([#include <mpi.h>],[],[AC_MSG_RESULT(yes)], [MPILIBS="" ++ AC_MSG_RESULT(no)]) ++fi], ++[C++], [if test x != x"$MPILIBS"; then ++ AC_MSG_CHECKING([for mpi.h]) ++ AC_TRY_COMPILE([#include <mpi.h>],[],[AC_MSG_RESULT(yes)], [MPILIBS="" ++ AC_MSG_RESULT(no)]) ++fi], ++[Fortran 77], [if test x != x"$MPILIBS"; then ++ AC_MSG_CHECKING([for mpif.h]) ++ AC_COMPILE_IFELSE([AC_LANG_PROGRAM([],[ include 'mpif.h'])],[AC_MSG_RESULT(yes)], [MPILIBS="" ++ AC_MSG_RESULT(no)]) ++fi], ++[Fortran], [if test x != x"$MPILIBS"; then ++ AC_MSG_CHECKING([for mpif.h]) ++ AC_COMPILE_IFELSE([AC_LANG_PROGRAM([],[ include 'mpif.h'])],[AC_MSG_RESULT(yes)], [MPILIBS="" ++ AC_MSG_RESULT(no)]) ++fi]) ++ ++AC_LANG_CASE([C], [CC="$ax_mpi_save_CC"], ++ [C++], [CXX="$ax_mpi_save_CXX"], ++ [Fortran 77], [F77="$ax_mpi_save_F77"], ++ [Fortran], [FC="$ax_mpi_save_FC"]) ++ ++AC_SUBST(MPILIBS) ++ ++# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND: ++if test x = x"$MPILIBS"; then ++ $2 ++ : ++else ++ ifelse([$1],,[AC_DEFINE(HAVE_MPI,1,[Define if you have the MPI library.])],[$1]) ++ : ++fi ++])dnl AX_MPI |