diff options
Diffstat (limited to 'sci-biology/rebase/rebase-1901-r1.ebuild')
| -rw-r--r-- | sci-biology/rebase/rebase-1901-r1.ebuild | 45 |
1 files changed, 45 insertions, 0 deletions
diff --git a/sci-biology/rebase/rebase-1901-r1.ebuild b/sci-biology/rebase/rebase-1901-r1.ebuild new file mode 100644 index 000000000000..a993a8c2c44a --- /dev/null +++ b/sci-biology/rebase/rebase-1901-r1.ebuild @@ -0,0 +1,45 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +MY_PV="${PV#1}" + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +LICENSE="public-domain" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" +IUSE="emboss minimal" +RESTRICT="binchecks strip" + +BDEPEND="emboss? ( sci-biology/emboss )" +REPEND="${BDEPEND}" + +src_compile() { + if use emboss; then + einfo + einfo "Indexing Rebase for usage with EMBOSS" + mkdir REBASE || die + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ + -protofile proto.${MY_PV} -equivalences \ + || die "Indexing Rebase failed" + einfo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${MY_PV} proto.${MY_PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} + insinto /usr/share/EMBOSS/data + doins REBASE/embossre.equ + fi +} |