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| author |   Pacho Ramos <pacho@gentoo.org> | 2020-06-07 12:40:38 +0200 |
|---|---|---|
| committer | Pacho Ramos <pacho@gentoo.org> | 2020-06-07 12:45:25 +0200 |
| commit | 33a4e2d54a55c79cf47ab4554daf9baf7cc40660 (patch) | |
| tree | 2cb400f075bc4638dbef2cf6b9abfffeaa40cd7b /sci-chemistry | |
| parent | dev-python/lmfit: Needed by newer chemex (diff) | |
| download | gentoo-33a4e2d54a55c79cf47ab4554daf9baf7cc40660.tar.gz gentoo-33a4e2d54a55c79cf47ab4554daf9baf7cc40660.tar.bz2 gentoo-33a4e2d54a55c79cf47ab4554daf9baf7cc40660.zip | |
sci-chemistry/chemex: Bump to 2018.10.2
Closes: https://bugs.gentoo.org/705648
Package-Manager: Portage-2.3.100, Repoman-2.3.22
Signed-off-by: Pacho Ramos <pacho@gentoo.org>
Diffstat (limited to 'sci-chemistry')
| -rw-r--r-- | sci-chemistry/chemex/Manifest | 1 | ||||
| -rw-r--r-- | sci-chemistry/chemex/chemex-2018.10.2.ebuild | 47 | ||||
| -rw-r--r-- | sci-chemistry/chemex/files/chemex-2018.10.2-tests-package.patch | 11 |
3 files changed, 59 insertions, 0 deletions
diff --git a/sci-chemistry/chemex/Manifest b/sci-chemistry/chemex/Manifest index 7a581bc1bd47..21f984a5160f 100644 --- a/sci-chemistry/chemex/Manifest +++ b/sci-chemistry/chemex/Manifest @@ -1 +1,2 @@ DIST chemex-0.6.1.tar.gz 1449216 BLAKE2B 6b7f7597b09cd43b9bec89b6359d1f650fdd7d4f3a373e706da80dafaf438417458f34af6bc378442b5b4a84cb8222103ebc8026c85583e8dece3fad0dc77204 SHA512 40f538ef9c162759c7a6863886da8d46746ac362fc19154f0a5f3dd8703f7fea7397c3f34092c86dbce486c452e0d3b09a76e4c11ae119834d7ca4912e7f3fdf +DIST chemex-2018.10.2.tar.gz 546575 BLAKE2B c36ae3bc152459844633276ab286b6f750ed5b2538c4289ceb75de9a081ad74fe346a79357fd6fc2f8972722b3520473262c4d623e46d6a4b30395962164a51f SHA512 f8ed017c0881ea9188e150456827e2c6302bdfe546c8058bd0261e43d941fbd1ac9e6abf1621d82107a4f6bd4e9aa4bc70c46e42dc98eabf2dba45a4fa78f77e diff --git a/sci-chemistry/chemex/chemex-2018.10.2.ebuild b/sci-chemistry/chemex/chemex-2018.10.2.ebuild new file mode 100644 index 000000000000..99f888adb024 --- /dev/null +++ b/sci-chemistry/chemex/chemex-2018.10.2.ebuild @@ -0,0 +1,47 @@ +# Copyright 1999-2020 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 +DISTUTILS_SINGLE_IMPL="yes" +DISTUTILS_USE_SETUPTOOLS=rdepend +PYTHON_COMPAT=( python3_{6..8} ) + +inherit distutils-r1 + +DESCRIPTION="Program to fit chemical exchange induced shift and relaxation data" +HOMEPAGE="https://github.com/gbouvignies/chemex" +SRC_URI="https://github.com/gbouvignies/chemex/archive/${PV}.tar.gz -> ${P}.tar.gz" + +SLOT="0" +LICENSE="BSD" +KEYWORDS="~amd64" +IUSE="test" +RESTRICT="!test? ( test )" + +RDEPEND=" + $(python_gen_cond_dep ' + >=dev-python/asteval-0.9.11[${PYTHON_MULTI_USEDEP}] + >=dev-python/lmfit-0.9.11[${PYTHON_MULTI_USEDEP}] + >=dev-python/matplotlib-1.1[${PYTHON_MULTI_USEDEP}] + dev-python/numpy[${PYTHON_MULTI_USEDEP}] + dev-python/setuptools_scm[${PYTHON_MULTI_USEDEP}] + >=sci-libs/scipy-0.11[${PYTHON_MULTI_USEDEP}] + ') +" +DEPEND="${RDEPEND}" + +S="${WORKDIR}/ChemEx-${PV}" + +PATCHES=( + # https://github.com/gbouvignies/ChemEx/issues/44 + "${FILESDIR}"/${P}-tests-package.patch +) + +src_prepare() { + export SETUPTOOLS_SCM_PRETEND_VERSION="${PV}" + distutils-r1_src_prepare +} + +python_test() { + py.test -v -v || die +} diff --git a/sci-chemistry/chemex/files/chemex-2018.10.2-tests-package.patch b/sci-chemistry/chemex/files/chemex-2018.10.2-tests-package.patch new file mode 100644 index 000000000000..d743c969a925 --- /dev/null +++ b/sci-chemistry/chemex/files/chemex-2018.10.2-tests-package.patch @@ -0,0 +1,11 @@ +--- a/setup.py~ 2019-03-12 21:45:04.000000000 +0100 ++++ b/setup.py 2020-06-07 11:36:28.052241913 +0200 +@@ -21,7 +21,7 @@ + "Programming Language :: Python :: 3.7", + ], + keywords="nmr protein dynamics chemical exchange cpmg cest relaxation data fitting", +- packages=find_packages(), ++ packages=find_packages(exclude=['tests']), + install_requires=[ + "numpy>=1.0", + "scipy>=1.0", |