proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

1 files changed, 77 insertions, 0 deletions

diff --git a/sci-biology/treeviewx/files/treeviewx-0.5.1-gcc4.3.patch b/sci-biology/treeviewx/files/treeviewx-0.5.1-gcc4.3.patch
new file mode 100644
index 000000000000..33bd3b1741f6
--- /dev/null
+++ b/sci-biology/treeviewx/files/treeviewx-0.5.1-gcc4.3.patch
@@ -0,0 +1,77 @@
+diff -Naur tv-0.5.1/TreeLib/Parse.cpp tv-0.5.1.new/TreeLib/Parse.cpp
+--- tv-0.5.1/TreeLib/Parse.cpp	2002-02-23 07:22:32.000000000 -0500
++++ tv-0.5.1.new/TreeLib/Parse.cpp	2008-06-17 06:08:24.000000000 -0400
+@@ -24,6 +24,11 @@
+ #include <ctype.h>
+ #include "Parse.h"
+ 
++
++
++
++#include <cstring>
++
+ // Return the next token in the string
+ tokentype Parser::NextToken ()
+ {
+diff -Naur tv-0.5.1/TreeLib/TreeLib.cpp tv-0.5.1.new/TreeLib/TreeLib.cpp
+--- tv-0.5.1/TreeLib/TreeLib.cpp	2004-05-13 08:22:11.000000000 -0400
++++ tv-0.5.1.new/TreeLib/TreeLib.cpp	2008-06-17 05:58:17.000000000 -0400
+@@ -24,6 +24,8 @@
+ #include "TreeLib.h"
+ #include "Parse.h"
+ 
++
++#include <cstdlib>
+ #include <vector>
+ 
+ 
+diff -Naur tv-0.5.1/TreeLib/treereader.cpp tv-0.5.1.new/TreeLib/treereader.cpp
+--- tv-0.5.1/TreeLib/treereader.cpp	2003-09-10 08:58:16.000000000 -0400
++++ tv-0.5.1.new/TreeLib/treereader.cpp	2008-06-17 06:07:15.000000000 -0400
+@@ -28,6 +28,9 @@
+ 	#include <stdlib.h>
+ #endif
+ 
++#include <cstring>
++#include <cstdlib>
++
+ //------------------------------------------------------------------------------
+ TreeReader::TreeReader (Tokeniser &p) : parser (p)
+ {
+diff -Naur tv-0.5.1/ncl-2.0/src/charactersblock.cpp tv-0.5.1.new/ncl-2.0/src/charactersblock.cpp
+--- tv-0.5.1/ncl-2.0/src/charactersblock.cpp	2002-12-10 06:35:49.000000000 -0500
++++ tv-0.5.1.new/ncl-2.0/src/charactersblock.cpp	2008-06-17 05:58:17.000000000 -0400
+@@ -1,3 +1,5 @@
++
++#include <cstring>
+ #include "nexusdefs.h"
+ #include "xnexus.h"
+ #include "nexustoken.h"
+diff -Naur tv-0.5.1/ncl-2.0/src/nexus.cpp tv-0.5.1.new/ncl-2.0/src/nexus.cpp
+--- tv-0.5.1/ncl-2.0/src/nexus.cpp	2002-12-10 06:35:50.000000000 -0500
++++ tv-0.5.1.new/ncl-2.0/src/nexus.cpp	2008-06-17 05:58:17.000000000 -0400
+@@ -1,3 +1,5 @@
++
++#include <cstring>
+ #include "nexusdefs.h"
+ #include "xnexus.h"
+ #include "nexustoken.h"
+diff -Naur tv-0.5.1/ncl-2.0/src/nexustoken.cpp tv-0.5.1.new/ncl-2.0/src/nexustoken.cpp
+--- tv-0.5.1/ncl-2.0/src/nexustoken.cpp	2005-04-29 10:28:17.000000000 -0400
++++ tv-0.5.1.new/ncl-2.0/src/nexustoken.cpp	2008-06-17 05:58:17.000000000 -0400
+@@ -1,3 +1,5 @@
++
++#include <cstring>
+ #include "nexusdefs.h"
+ #include "xnexus.h"
+ #include "nexustoken.h"
+diff -Naur tv-0.5.1/ncl-2.0/src/nxsstring.cpp tv-0.5.1.new/ncl-2.0/src/nxsstring.cpp
+--- tv-0.5.1/ncl-2.0/src/nxsstring.cpp	2001-02-02 07:55:40.000000000 -0500
++++ tv-0.5.1.new/ncl-2.0/src/nxsstring.cpp	2008-06-17 05:58:17.000000000 -0400
+@@ -1,3 +1,6 @@
++
++#include <cstring>
++
+ #ifdef __BORLANDC__
+ 	// Undefine __MINMAX_DEFINED so that min and max are correctly defined
+ 	#ifdef __MINMAX_DEFINED