From b62ae26a9aefd5820175900c086d55c135977730 Mon Sep 17 00:00:00 2001 From: Justin Bronder <jsbronder@gentoo.org> Date: Thu, 11 Jul 2013 01:04:06 +0000 Subject: bump and cleanup Package-Manager: portage-2.1.12.2/cvs/Linux x86_64 Manifest-Sign-Key: 0x4D7043C9 --- sys-cluster/openmpi/ChangeLog | 8 +- sys-cluster/openmpi/Manifest | 14 +-- sys-cluster/openmpi/openmpi-1.4.4.ebuild | 104 ------------------ sys-cluster/openmpi/openmpi-1.6.4-r1.ebuild | 164 ---------------------------- sys-cluster/openmpi/openmpi-1.6.5.ebuild | 164 ++++++++++++++++++++++++++++ 5 files changed, 177 insertions(+), 277 deletions(-) delete mode 100644 sys-cluster/openmpi/openmpi-1.4.4.ebuild delete mode 100644 sys-cluster/openmpi/openmpi-1.6.4-r1.ebuild create mode 100644 sys-cluster/openmpi/openmpi-1.6.5.ebuild (limited to 'sys-cluster/openmpi') diff --git a/sys-cluster/openmpi/ChangeLog b/sys-cluster/openmpi/ChangeLog index 37039cf88828..21c65be55d0d 100644 --- a/sys-cluster/openmpi/ChangeLog +++ b/sys-cluster/openmpi/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sys-cluster/openmpi # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/ChangeLog,v 1.121 2013/07/09 22:28:16 jsbronder Exp $ +# $Header: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/ChangeLog,v 1.122 2013/07/11 01:03:55 jsbronder Exp $ + +*openmpi-1.6.5 (11 Jul 2013) + + 11 Jul 2013; Justin Bronder <jsbronder@gentoo.org> -openmpi-1.4.4.ebuild, + -openmpi-1.6.4-r1.ebuild, +openmpi-1.6.5.ebuild: + bump and cleanup 09 Jul 2013; Justin Bronder <jsbronder@gentoo.org> openmpi-1.4.3.ebuild, openmpi-1.4.4.ebuild, openmpi-1.4.5.ebuild, openmpi-1.6.3.ebuild, diff --git a/sys-cluster/openmpi/Manifest b/sys-cluster/openmpi/Manifest index 3e1b436821d5..687509aaf113 100644 --- a/sys-cluster/openmpi/Manifest +++ b/sys-cluster/openmpi/Manifest @@ -6,21 +6,19 @@ AUX openmpi-1.4.1-r22513.patch 2460 SHA256 083528f3ccdda8e1654accd5a6d3c79231d7d AUX openmpi-1.6-hostfile.patch 929 SHA256 4aca97b15207c633aaf70ee3aeadcb3b9034fa49780dafeacdb19cbdc765fe66 SHA512 2c229bbf938802570714224d479172da8f039eee82ac3906639d2cdd68aa0f0690a41f448d3dbb66ea2546f5a0e39043255dbe89c27ac4006f611dcaded0bf9f WHIRLPOOL c99ba9f3c69d7246d6c8aaebe0e4af85a30f02b906e5e8e2b75555a44180d68d89772d37df503c4b269cb9d31154d80087c8d31fa50f725e589a21b6b2fb438a AUX openmpi-r24328.patch 1707 SHA256 3149f47463057e3263a242b2df88b588074f07395d437b585c5ce37f84aadf83 SHA512 e376f60f4c7bca610873ac5de5a9e72afab459262acf6f6ad61d4e8aa7a7d33370c52d2dcf2279a992de159b47d7d2fe29257306cf3e11a82234668205b876bf WHIRLPOOL 732347d68ba261f32c1010bcfeff2c490bc436d45a01119741fe68ee6ef366a2021e8d37dfb8ae2ffd681997111951eab4d57b00ff430e09d6c6f929e26816f9 DIST openmpi-1.4.3.tar.bz2 6626909 SHA256 220b72b1c7ee35469ff74b4cfdbec457158ac6894635143a33e9178aa3981015 -DIST openmpi-1.4.4.tar.bz2 6653048 SHA256 9ad125304a89232d5b04da251f463fdbd8dcd997450084ba4227e7f7a095c3ed DIST openmpi-1.4.5.tar.bz2 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34f1acfaee950beb462fe7bc1a19b76dc3aea63623959aeb9f34037e31116c0add40cd9be447d0190e859039b1073e469f7fa552b25ff8eb7a583912af010561 -----BEGIN PGP SIGNATURE----- Version: GnuPG v2.0.19 (GNU/Linux) -iEYEAREIAAYFAlHcjooACgkQ4MrvBE1wQ8n8mgCfcDunCpLqKjr+6bkmXD7kBiiI -XIMAnjUum2ihS1B/eySoQALr2tputEOH -=H4vT +iEYEAREIAAYFAlHeBIEACgkQ4MrvBE1wQ8lJ+wCgqAYETFA57NWfkHhrtraW22RS +DgEAn3VVXf1AGdshA+C1y+0mCcqhJ8HD +=clTC -----END PGP SIGNATURE----- diff --git a/sys-cluster/openmpi/openmpi-1.4.4.ebuild b/sys-cluster/openmpi/openmpi-1.4.4.ebuild deleted file mode 100644 index 06fd47fdaedf..000000000000 --- a/sys-cluster/openmpi/openmpi-1.4.4.ebuild +++ /dev/null @@ -1,104 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/openmpi-1.4.4.ebuild,v 1.5 2013/07/09 22:28:16 jsbronder Exp $ - -EAPI=3 - -FORTRAN_NEEDED=fortran - -inherit eutils fortran-2 multilib flag-o-matic toolchain-funcs - -MY_P=${P/-mpi} - -DESCRIPTION="A high-performance message passing library (MPI)" -HOMEPAGE="http://www.open-mpi.org" -SRC_URI="http://www.open-mpi.org/software/ompi/v1.4/downloads/${MY_P}.tar.bz2" - -LICENSE="BSD" -SLOT="0" -RESTRICT="mpi-threads? ( test )" - -KEYWORDS="~alpha ~amd64 ~ia64 ~ppc ~ppc64 ~sparc ~x86 ~x86-fbsd" -IUSE="+cxx elibc_FreeBSD fortran heterogeneous ipv6 mpi-threads pbs romio threads vt" -RDEPEND=" - pbs? ( sys-cluster/torque ) - vt? ( - !dev-libs/libotf - !app-text/lcdf-typetools - ) - elibc_FreeBSD? ( dev-libs/libexecinfo ) - !sys-cluster/mpich - !sys-cluster/mpich2 - !sys-cluster/mpiexec" -DEPEND="${RDEPEND}" - -S=${WORKDIR}/${MY_P} - -pkg_setup() { - fortran-2_pkg_setup - if use mpi-threads; then - echo - ewarn "WARNING: use of MPI_THREAD_MULTIPLE is still disabled by" - ewarn "default and officially unsupported by upstream." - ewarn "You may stop now and set USE=-mpi-threads" - echo - fi - - echo - elog "OpenMPI has an overwhelming count of configuration options." - elog "Don't forget the EXTRA_ECONF environment variable can let you" - elog "specify configure options if you find them necessary." - echo -} - -src_prepare() { - # Necessary for scalibility, see - # http://www.open-mpi.org/community/lists/users/2008/09/6514.php - if use threads; then - echo 'oob_tcp_listen_mode = listen_thread' \ - >> opal/etc/openmpi-mca-params.conf - fi -} - -src_configure() { - local myconf=( - --sysconfdir="${EPREFIX}/etc/${PN}" - --enable-pretty-print-stacktrace - --enable-orterun-prefix-by-default - --without-slurm) - - if use mpi-threads; then - myconf+=(--enable-mpi-threads - --enable-progress-threads) - fi - - if use fortran; then - if [[ $(tc-getFC) =~ g77 ]]; then - myconf+=(--disable-mpi-f90) - elif [[ $(tc-getFC) =~ if ]]; then - # Enabled here as gfortran compile times are huge with this enabled. - myconf+=(--with-mpi-f90-size=medium) - fi - else - myconf+=(--disable-mpi-f90 --disable-mpi-f77) - fi - - ! use vt && myconf+=(--enable-contrib-no-build=vt) - - econf "${myconf[@]}" \ - $(use_enable cxx mpi-cxx) \ - $(use_enable romio io-romio) \ - $(use_enable heterogeneous) \ - $(use_with pbs tm) \ - $(use_enable ipv6) -} - -src_install () { - emake DESTDIR="${D}" install || die "make install failed" - dodoc README AUTHORS NEWS VERSION || die -} - -src_test() { - # Doesn't work with the default src_test as the dry run (-n) fails. - emake -j1 check || die "emake check failed" -} diff --git a/sys-cluster/openmpi/openmpi-1.6.4-r1.ebuild b/sys-cluster/openmpi/openmpi-1.6.4-r1.ebuild deleted file mode 100644 index d5961b88f3ec..000000000000 --- a/sys-cluster/openmpi/openmpi-1.6.4-r1.ebuild +++ /dev/null @@ -1,164 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/openmpi-1.6.4-r1.ebuild,v 1.3 2013/07/09 22:28:16 jsbronder Exp $ - -EAPI=5 - -FORTRAN_NEEDED=fortran - -inherit eutils fortran-2 multilib flag-o-matic toolchain-funcs versionator - -MY_P=${P/-mpi} -S=${WORKDIR}/${MY_P} - -IUSE_OPENMPI_FABRICS=" - openmpi_fabrics_dapl - openmpi_fabrics_ofed - openmpi_fabrics_knem - openmpi_fabrics_open-mx - openmpi_fabrics_psm - openmpi_fabrics_sctp" - -IUSE_OPENMPI_RM=" - openmpi_rm_pbs - openmpi_rm_slurm" - -IUSE_OPENMPI_OFED_FEATURES=" - openmpi_ofed_features_control-hdr-padding - openmpi_ofed_features_connectx-xrc - openmpi_ofed_features_rdmacm - openmpi_ofed_features_dynamic-sl - openmpi_ofed_features_failover - " - -DESCRIPTION="A high-performance message passing library (MPI)" -HOMEPAGE="http://www.open-mpi.org" -SRC_URI="http://www.open-mpi.org/software/ompi/v$(get_version_component_range 1-2)/downloads/${MY_P}.tar.bz2" -LICENSE="BSD" -SLOT="0" -KEYWORDS="~alpha ~amd64 ~ia64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-fbsd ~x86-fbsd ~amd64-linux" -IUSE="+cxx elibc_FreeBSD fortran heterogeneous ipv6 mpi-threads romio threads vt - ${IUSE_OPENMPI_FABRICS} ${IUSE_OPENMPI_RM} ${IUSE_OPENMPI_OFED_FEATURES}" - -REQUIRED_USE="openmpi_rm_slurm? ( !openmpi_rm_pbs ) - openmpi_rm_pbs? ( !openmpi_rm_slurm ) - openmpi_fabrics_psm? ( openmpi_fabrics_ofed ) - openmpi_ofed_features_control-hdr-padding? ( openmpi_fabrics_ofed ) - openmpi_ofed_features_connectx-xrc? ( openmpi_fabrics_ofed ) - openmpi_ofed_features_rdmacm? ( openmpi_fabrics_ofed ) - openmpi_ofed_features_dynamic-sl? ( openmpi_fabrics_ofed ) - openmpi_ofed_features_failover? ( openmpi_fabrics_ofed )" - -RDEPEND=" - !sys-cluster/mpich - !sys-cluster/mpich2 - !sys-cluster/mpiexec - >=sys-apps/hwloc-1.3 - elibc_FreeBSD? ( dev-libs/libexecinfo ) - openmpi_fabrics_dapl? ( sys-infiniband/dapl ) - openmpi_fabrics_ofed? ( sys-infiniband/ofed ) - openmpi_fabrics_knem? ( sys-cluster/knem ) - openmpi_fabrics_open-mx? ( sys-cluster/open-mx ) - openmpi_fabrics_psm? ( sys-infiniband/infinipath-psm ) - openmpi_fabrics_sctp? ( net-misc/lksctp-tools ) - openmpi_rm_pbs? ( sys-cluster/torque ) - openmpi_rm_slurm? ( sys-cluster/slurm ) - openmpi_ofed_features_rdmacm? ( sys-infiniband/librdmacm ) - vt? ( - !dev-libs/libotf - !app-text/lcdf-typetools - ) - " -DEPEND="${RDEPEND}" -# TODO: Newer releases of Vampir use otf2 which would resolve the above blockers. - -pkg_setup() { - fortran-2_pkg_setup - if use mpi-threads; then - echo - ewarn "WARNING: use of MPI_THREAD_MULTIPLE is still disabled by" - ewarn "default and officially unsupported by upstream." - ewarn "You may stop now and set USE=-mpi-threads" - echo - fi - - echo - elog "OpenMPI has an overwhelming count of configuration options." - elog "Don't forget the EXTRA_ECONF environment variable can let you" - elog "specify configure options if you find them necessary." - echo - -} - -src_prepare() { - # Necessary for scalibility, see - # http://www.open-mpi.org/community/lists/users/2008/09/6514.php - if use threads; then - echo 'oob_tcp_listen_mode = listen_thread' \ - >> opal/etc/openmpi-mca-params.conf - fi - - # https://svn.open-mpi.org/trac/ompi/ticket/3649 - # https://svn.open-mpi.org/trac/ompi/ticket/3648 - epatch "${FILESDIR}"/hooks-disable-malloc-override-inside-of-Gentoo-sandb.patch -} - -src_configure() { - local myconf=( - --sysconfdir="${EPREFIX}/etc/${PN}" - --enable-pretty-print-stacktrace - --enable-orterun-prefix-by-default - --with-hwloc="${EPREFIX}/usr" - ) - - if use mpi-threads; then - myconf+=( - --enable-mpi-thread-multiple - --enable-opal-multi-threads - ) - fi - - if use fortran; then - if [[ $(tc-getFC) =~ g77 ]]; then - myconf+=(--disable-mpi-f90) - elif [[ $(tc-getFC) =~ if ]]; then - # Enabled here as gfortran compile times are huge with this enabled. - myconf+=(--with-mpi-f90-size=medium) - fi - else - myconf+=(--disable-mpi-f90 --disable-mpi-f77) - fi - - ! use vt && myconf+=(--enable-contrib-no-build=vt) - - econf "${myconf[@]}" \ - $(use_enable cxx mpi-cxx) \ - $(use_enable romio io-romio) \ - $(use_enable heterogeneous) \ - $(use_enable ipv6) \ - $(use_with openmpi_fabrics_dapl udapl "${EPREFIX}"/usr) \ - $(use_with openmpi_fabrics_ofed openib "${EPREFIX}"/usr) \ - $(use_with openmpi_fabrics_knem knem "${EPREFIX}"/usr) \ - $(use_with openmpi_fabrics_open-mx mx "${EPREFIX}"/usr) \ - $(use_with openmpi_fabrics_psm psm "${EPREFIX}"/usr) \ - $(use_enable openmpi_ofed_features_control-hdr-padding openib-control-hdr-padding) \ - $(use_enable openmpi_ofed_features_connectx-xrc openib-connectx-xrc) \ - $(use_enable openmpi_ofed_features_rdmacm openib-rdmacm) \ - $(use_enable openmpi_ofed_features_dynamic-sl openib-dynamic-sl) \ - $(use_enable openmpi_ofed_features_failover btl-openib-failover) \ - $(use_with openmpi_fabrics_sctp sctp) \ - $(use_with openmpi_rm_pbs tm) \ - $(use_with openmpi_rm_slurm slurm) -} - -src_install () { - emake DESTDIR="${D}" install || die "make install failed" - # From USE=vt see #359917 - rm "${ED}"/usr/share/libtool &> /dev/null - dodoc README AUTHORS NEWS VERSION || die -} - -src_test() { - # Doesn't work with the default src_test as the dry run (-n) fails. - emake -j1 check || die "emake check failed" -} diff --git a/sys-cluster/openmpi/openmpi-1.6.5.ebuild b/sys-cluster/openmpi/openmpi-1.6.5.ebuild new file mode 100644 index 000000000000..0bc0144fedb7 --- /dev/null +++ b/sys-cluster/openmpi/openmpi-1.6.5.ebuild @@ -0,0 +1,164 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sys-cluster/openmpi/openmpi-1.6.5.ebuild,v 1.1 2013/07/11 01:03:55 jsbronder Exp $ + +EAPI=5 + +FORTRAN_NEEDED=fortran + +inherit eutils fortran-2 multilib flag-o-matic toolchain-funcs versionator + +MY_P=${P/-mpi} +S=${WORKDIR}/${MY_P} + +IUSE_OPENMPI_FABRICS=" + openmpi_fabrics_dapl + openmpi_fabrics_ofed + openmpi_fabrics_knem + openmpi_fabrics_open-mx + openmpi_fabrics_psm + openmpi_fabrics_sctp" + +IUSE_OPENMPI_RM=" + openmpi_rm_pbs + openmpi_rm_slurm" + +IUSE_OPENMPI_OFED_FEATURES=" + openmpi_ofed_features_control-hdr-padding + openmpi_ofed_features_connectx-xrc + openmpi_ofed_features_rdmacm + openmpi_ofed_features_dynamic-sl + openmpi_ofed_features_failover + " + +DESCRIPTION="A high-performance message passing library (MPI)" +HOMEPAGE="http://www.open-mpi.org" +SRC_URI="http://www.open-mpi.org/software/ompi/v$(get_version_component_range 1-2)/downloads/${MY_P}.tar.bz2" +LICENSE="BSD" +SLOT="0" +KEYWORDS="~alpha ~amd64 ~ia64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-fbsd ~x86-fbsd ~amd64-linux" +IUSE="+cxx elibc_FreeBSD fortran heterogeneous ipv6 mpi-threads romio threads vt + ${IUSE_OPENMPI_FABRICS} ${IUSE_OPENMPI_RM} ${IUSE_OPENMPI_OFED_FEATURES}" + +REQUIRED_USE="openmpi_rm_slurm? ( !openmpi_rm_pbs ) + openmpi_rm_pbs? ( !openmpi_rm_slurm ) + openmpi_fabrics_psm? ( openmpi_fabrics_ofed ) + openmpi_ofed_features_control-hdr-padding? ( openmpi_fabrics_ofed ) + openmpi_ofed_features_connectx-xrc? ( openmpi_fabrics_ofed ) + openmpi_ofed_features_rdmacm? ( openmpi_fabrics_ofed ) + openmpi_ofed_features_dynamic-sl? ( openmpi_fabrics_ofed ) + openmpi_ofed_features_failover? ( openmpi_fabrics_ofed )" + +RDEPEND=" + !sys-cluster/mpich + !sys-cluster/mpich2 + !sys-cluster/mpiexec + >=sys-apps/hwloc-1.3 + elibc_FreeBSD? ( dev-libs/libexecinfo ) + openmpi_fabrics_dapl? ( sys-infiniband/dapl ) + openmpi_fabrics_ofed? ( sys-infiniband/ofed ) + openmpi_fabrics_knem? ( sys-cluster/knem ) + openmpi_fabrics_open-mx? ( sys-cluster/open-mx ) + openmpi_fabrics_psm? ( sys-infiniband/infinipath-psm ) + openmpi_fabrics_sctp? ( net-misc/lksctp-tools ) + openmpi_rm_pbs? ( sys-cluster/torque ) + openmpi_rm_slurm? ( sys-cluster/slurm ) + openmpi_ofed_features_rdmacm? ( sys-infiniband/librdmacm ) + vt? ( + !dev-libs/libotf + !app-text/lcdf-typetools + ) + " +DEPEND="${RDEPEND}" +# TODO: Newer releases of Vampir use otf2 which would resolve the above blockers. + +pkg_setup() { + fortran-2_pkg_setup + if use mpi-threads; then + echo + ewarn "WARNING: use of MPI_THREAD_MULTIPLE is still disabled by" + ewarn "default and officially unsupported by upstream." + ewarn "You may stop now and set USE=-mpi-threads" + echo + fi + + echo + elog "OpenMPI has an overwhelming count of configuration options." + elog "Don't forget the EXTRA_ECONF environment variable can let you" + elog "specify configure options if you find them necessary." + echo + +} + +src_prepare() { + # Necessary for scalibility, see + # http://www.open-mpi.org/community/lists/users/2008/09/6514.php + if use threads; then + echo 'oob_tcp_listen_mode = listen_thread' \ + >> opal/etc/openmpi-mca-params.conf + fi + + # https://svn.open-mpi.org/trac/ompi/ticket/3649 + # https://svn.open-mpi.org/trac/ompi/ticket/3648 + epatch "${FILESDIR}"/hooks-disable-malloc-override-inside-of-Gentoo-sandb.patch +} + +src_configure() { + local myconf=( + --sysconfdir="${EPREFIX}/etc/${PN}" + --enable-pretty-print-stacktrace + --enable-orterun-prefix-by-default + --with-hwloc="${EPREFIX}/usr" + ) + + if use mpi-threads; then + myconf+=( + --enable-mpi-thread-multiple + --enable-opal-multi-threads + ) + fi + + if use fortran; then + if [[ $(tc-getFC) =~ g77 ]]; then + myconf+=(--disable-mpi-f90) + elif [[ $(tc-getFC) =~ if ]]; then + # Enabled here as gfortran compile times are huge with this enabled. + myconf+=(--with-mpi-f90-size=medium) + fi + else + myconf+=(--disable-mpi-f90 --disable-mpi-f77) + fi + + ! use vt && myconf+=(--enable-contrib-no-build=vt) + + econf "${myconf[@]}" \ + $(use_enable cxx mpi-cxx) \ + $(use_enable romio io-romio) \ + $(use_enable heterogeneous) \ + $(use_enable ipv6) \ + $(use_with openmpi_fabrics_dapl udapl "${EPREFIX}"/usr) \ + $(use_with openmpi_fabrics_ofed openib "${EPREFIX}"/usr) \ + $(use_with openmpi_fabrics_knem knem "${EPREFIX}"/usr) \ + $(use_with openmpi_fabrics_open-mx mx "${EPREFIX}"/usr) \ + $(use_with openmpi_fabrics_psm psm "${EPREFIX}"/usr) \ + $(use_enable openmpi_ofed_features_control-hdr-padding openib-control-hdr-padding) \ + $(use_enable openmpi_ofed_features_connectx-xrc openib-connectx-xrc) \ + $(use_enable openmpi_ofed_features_rdmacm openib-rdmacm) \ + $(use_enable openmpi_ofed_features_dynamic-sl openib-dynamic-sl) \ + $(use_enable openmpi_ofed_features_failover btl-openib-failover) \ + $(use_with openmpi_fabrics_sctp sctp) \ + $(use_with openmpi_rm_pbs tm) \ + $(use_with openmpi_rm_slurm slurm) +} + +src_install () { + emake DESTDIR="${D}" install || die "make install failed" + # From USE=vt see #359917 + rm "${ED}"/usr/share/libtool &> /dev/null + dodoc README AUTHORS NEWS VERSION || die +} + +src_test() { + # Doesn't work with the default src_test as the dry run (-n) fails. + emake -j1 check || die "emake check failed" +} -- cgit v1.2.3-65-gdbad