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path: root/dev-perl/Bio-DB-HTS
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* **/metadata.xml: Replace http by https in DOCTYPE elementUlrich Müller2021-09-111-1/+1
| | | | | Bug: https://bugs.gentoo.org/552720 Signed-off-by: Ulrich Müller <ulm@gentoo.org>
* dev-perl/Bio-DB-HTS: reassign from self to the Perl projectMarek Szuba2021-02-201-4/+4
| | | | | | As discussed on IRC. Signed-off-by: Marek Szuba <marecki@gentoo.org>
* dev-perl/Bio-DB-HTS: Drop to unstableDavid Seifert2020-12-101-1/+1
| | | | | Package-Manager: Portage-3.0.12, Repoman-3.0.2 Signed-off-by: David Seifert <soap@gentoo.org>
* dev-perl/Bio-DB-HTS: remove oldMarek Szuba2020-08-273-69/+0
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* dev-perl/Bio-DB-HTS: Stabilize 3.10.0-r1 amd64, #738212Sam James2020-08-241-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* dev-perl/Bio-DB-HTS: Stabilize 3.10.0-r1 x86, #738212Sam James2020-08-241-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* dev-perl/Bio-DB-HTS: -r1 bump for EAPI7 + toolchain loveKent Fredric2020-07-042-0/+74
| | | | | | | | | | - EAPI7 - Ensure not breaking when LD=!ccld - Ensure passing CFLAGS to make/compiler - Populate more remote-id's in metadata.xml Package-Manager: Portage-2.3.100, Repoman-2.3.22 Signed-off-by: Kent Fredric <kentnl@gentoo.org>
* dev-perl/Bio-DB-HTS: respect LDFLAGSMarek Szuba2020-03-243-1/+25
| | | | | | Closes: https://bugs.gentoo.org/713816 Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Marek Szuba <marecki@gentoo.org>
* dev-perl/Bio-DB-HTS: x86 stable wrt bug #713240Agostino Sarubbo2020-03-211-1/+1
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* dev-perl/Bio-DB-HTS: amd64 stable wrt bug #713240Agostino Sarubbo2020-03-211-2/+2
| | | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* dev-perl/Bio-DB-HTS: Normalize package versionsAndreas K. Hüttel2019-12-102-0/+0
| | | | | Package-Manager: Portage-2.3.78, Repoman-2.3.17 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* dev-perl/Bio-DB-HTS: add test restrictionsMarek Szuba2019-10-082-0/+4
| | | | | | | As recommended by pkgcheck. Package-Manager: Portage-2.3.76, Repoman-2.3.16 Signed-off-by: Marek Szuba <marecki@gentoo.org>
* dev-perl/Bio-DB-HTS: bump to 3.01Marek Szuba2019-06-103-1/+33
| | | | | Signed-off-by: Marek Szuba <marecki@gentoo.org> Package-Manager: Portage-2.3.66, Repoman-2.3.11
* dev-perl/Bio-DB-HTS: remove oldMarek Szuba2018-05-014-110/+0
| | | | Package-Manager: Portage-2.3.24, Repoman-2.3.6
* dev-perl/Bio-DB-HTS: bump to 2.11Marek Szuba2018-05-013-0/+97
| | | | Package-Manager: Portage-2.3.24, Repoman-2.3.6
* dev-perl/Bio-DB-HTS: allow explicit specification of htslib directoriesMarek Szuba2018-05-012-1/+50
| | | | | | | | | | | | | | | Upstream build script takes a single directory as htslib prefix, then appends "include/htslib" while looking for header files and "lib" while looking for library. Unsurprisingly, the latter fails to locate the htslib library on SYMLINK_LIB=no systems. I have patched the build script to allow both htslib-includedir and htslib-libdir to be provided explicitly, thus letting the ebuild take care of choosing the correct libdir name for the specified architecture/ABI. Closes: https://bugs.gentoo.org/654460 Package-Manager: Portage-2.3.24, Repoman-2.3.6
* dev-perl/Bio-DB-HTS: add missing dependencyMarek Szuba2018-05-011-1/+2
| | | | Package-Manager: Portage-2.3.24, Repoman-2.3.6
* dev-perl/Bio-DB-HTS: new packageMarek Szuba2018-04-264-0/+77
Perl bindings for sci-libs/htslib, used by e.g. Ensembl. Package-Manager: Portage-2.3.24, Repoman-2.3.6