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* pgd-utils: bump to 0.4.2Donnie Berkholz2008-06-162-2/+2
* barry: needs new autoconf-archive to get AX_C_CHECK_FLAG that works.Donnie Berkholz2008-05-282-1/+4
* Mask live biskit, starparse, gnuplot.Donnie Berkholz2008-05-281-0/+3
* Mask barry-9999.Donnie Berkholz2008-05-281-0/+1
* barry: Add live CVS version.Donnie Berkholz2008-05-284-0/+91
* Remove olpc stuff, it's crazy old and never worked.Donnie Berkholz2008-05-269-148/+0
* guile-gnome-platform: don't think we need guile-lib anymore...Donnie Berkholz2008-05-262-3/+2
* Add a data uploader for the RescueTime time tracker.Donnie Berkholz2008-05-202-0/+89
* Add libgtksourceviewmm with gcc-4.3 patch for nemiver.Donnie Berkholz2008-05-175-0/+114
* bash: merged to gentoo-x86.Donnie Berkholz2008-05-1761-4333/+0
* Add shunit2 from gechi-overlay and bump to latest.Donnie Berkholz2008-05-174-0/+69
* Add bashdoc, a tool to make documentation from bash scripts.Donnie Berkholz2008-05-172-0/+31
* xen: add version that compiles with gcc 4.3 --configured-with flag.Donnie Berkholz2008-05-155-0/+380
* bash: Add a revbump that installs examples with USE=examples.Donnie Berkholz2008-05-1561-0/+4333
* mmtk: bump to 2.5.23.Donnie Berkholz2008-05-123-6/+3
* scientificpython: bump to dev release, numpy compatible.Donnie Berkholz2008-05-125-0/+224
* cclib: new package, parses results of computational chemistry packages.Donnie Berkholz2008-05-123-0/+33
* coot: bump to 0.5_pre1-r87, add gcc 4.3 patch.Donnie Berkholz2008-05-034-36/+365
* guile: gcc 4.3 fixes merged to gentoo-x86.Donnie Berkholz2008-04-295-680/+0
* biskit-9999: install tests.Donnie Berkholz2008-04-292-1/+2
* readseq: merged to gentoo-x86.Donnie Berkholz2008-04-292-43/+0
* biskit: add live-subversion ebuild.Donnie Berkholz2008-04-292-0/+68
* readseq: use my dev.g.o site for mirror.Donnie Berkholz2008-04-252-2/+6
* readseq: bump to java version, 20080420.Donnie Berkholz2008-04-252-0/+39
* guile-gnome-platform: bump to 2.15.98.Donnie Berkholz2008-04-252-0/+51
* g-wrap: bump to 1.9.10.Donnie Berkholz2008-04-2512-0/+501
* guile: Add 1.8.4 with gcc-4.3 fixes.Donnie Berkholz2008-04-255-0/+680
* sunstudio: forgot to actually commit the 200709 ebuild.Donnie Berkholz2008-04-181-0/+65
* sap: Structure Alignment Program. Required for some t-coffee operations.Donnie Berkholz2008-04-152-0/+33
* abinit: bump to 5.4.4.Donnie Berkholz2008-04-158-0/+229
* octopus: Add a time-dependent density functional theory program.Donnie Berkholz2008-04-152-0/+46
* python: add 2.5.2.Donnie Berkholz2008-04-1517-0/+2691
* tp_smapi: Add a version that lets me have hdaps as a kernel module.Donnie Berkholz2008-04-152-0/+61
* espresso: Add 4.0_pre2. Doesn't require build hacks anymore!Donnie Berkholz2008-04-155-101/+14
* git: add missing xinetd file.Donnie Berkholz2008-04-141-0/+13
* probalign: use TMPDIR variable for temporary files.Donnie Berkholz2008-04-143-1/+52
* Add foldx-bin, required for biskit.Donnie Berkholz2008-04-142-0/+41
* Add initial ebuild for biskit, a structural bioinformatics framework.Donnie Berkholz2008-04-143-0/+86
* git: bump to 1.5.5.Donnie Berkholz2008-04-146-19/+629
* probalign: refinements suggested by betelgeuse.Donnie Berkholz2008-04-082-4/+2
* Add new alignment package, probalign.Donnie Berkholz2008-04-084-0/+96
* pgd-utils: bump to 0.4.1.Donnie Berkholz2008-03-303-13/+5
* Add dev snapshot of gxine.Donnie Berkholz2008-03-302-0/+73
* Mask live-git ebuilds.Donnie Berkholz2008-03-271-0/+8
* ann: new package to find approximate nearest neighbors.Donnie Berkholz2008-03-252-0/+43
* tp_smapi: bump to 0.36Donnie Berkholz2008-03-242-2/+2
* vcg: add dep of qutemol.Donnie Berkholz2008-03-243-0/+129
* pbs-python: merged to main tree.Donnie Berkholz2008-03-242-24/+0
* gcc: delete 4.3.0, use glibc-2.7-r2 in main tree as of 3 hours ago.Donnie Berkholz2008-03-2458-7458/+0
* pbs-python: new package; bindings to the PBS API.Donnie Berkholz2008-03-242-0/+24