# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/kalign/kalign-2.03-r1.ebuild,v 1.1 2010/09/04 18:16:18 xarthisius Exp $

EAPI=2

inherit toolchain-funcs

DESCRIPTION="Global and progressive multiple sequence alignment"
HOMEPAGE="http://msa.cgb.ki.se/"
SRC_URI="mirror://debian/pool/main/k/kalign/${PN}_${PV}.orig.tar.gz"

LICENSE="GPL-2"
SLOT="0"
IUSE=""
KEYWORDS="~amd64 ~x86"

S=${WORKDIR}/${PN}

src_prepare() {
	sed -e "s/\$(CFLAGS) \$(OBJECTS)/\$(LDFLAGS) &/" \
		-i Makefile.in || die
}

src_compile() {
	emake CC="$(tc-getCC)" CFLAGS="${CFLAGS}" || die
}

src_install() {
	dobin kalign || die
	dodoc README || die
}