diff options
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/mosaik/ChangeLog | 7 | ||||
| -rw-r--r-- | sci-biology/mosaik/mosaik-1.0.1388.ebuild | 38 |
2 files changed, 44 insertions, 1 deletions
diff --git a/sci-biology/mosaik/ChangeLog b/sci-biology/mosaik/ChangeLog index 37b470252215..9613d2257c8e 100644 --- a/sci-biology/mosaik/ChangeLog +++ b/sci-biology/mosaik/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/mosaik # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/mosaik/ChangeLog,v 1.3 2010/01/03 14:25:26 pacho Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mosaik/ChangeLog,v 1.4 2010/04/11 17:29:40 weaver Exp $ + +*mosaik-1.0.1388 (11 Apr 2010) + + 11 Apr 2010; Andrey Kislyuk <weaver@gentoo.org> +mosaik-1.0.1388.ebuild: + Version bump, address bug 314659 03 Jan 2010; Pacho Ramos <pacho@gentoo.org> mosaik-1.0.1367.ebuild: amd64 stable, bug 298766 diff --git a/sci-biology/mosaik/mosaik-1.0.1388.ebuild b/sci-biology/mosaik/mosaik-1.0.1388.ebuild new file mode 100644 index 000000000000..e08292a3f319 --- /dev/null +++ b/sci-biology/mosaik/mosaik-1.0.1388.ebuild @@ -0,0 +1,38 @@ +# Copyright 1999-2010 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mosaik/mosaik-1.0.1388.ebuild,v 1.1 2010/04/11 17:29:40 weaver Exp $ + +EAPI="2" + +DESCRIPTION="A reference-guided aligner for next-generation sequencing technologies" +HOMEPAGE="http://code.google.com/p/mosaik-aligner/" +SRC_URI="http://mosaik-aligner.googlecode.com/files/Mosaik-${PV}-source.tar.bz2" + +LICENSE="GPL-2" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="" + +S="${WORKDIR}/mosaik-aligner" + +src_prepare() { + sed -i 's/-static//' src/includes/linux.inc || die +} + +src_compile() { + emake -C src || die +# emake -C MosaikTools/c++ || die +# emake -C MosaikTools/perl || die +} + +src_install() { + dobin bin/* || die + + insinto /usr/share/${PN} + doins -r MosaikTools || die + + dodoc README Mosaik-1.0-Documentation.pdf +} |